BAC Information

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BAC

Clone NameB6Ng01-129K01
Chromosome8 (Build37)
Map Location 83,845,460 - 83,987,259
singlet/doubletdoublet
Overlap genenone
Upstream geneGypa, Frem3, Smarca5, Gab1, LOC666237, LOC100039496, LOC234501, LOC100039518, Usp38, EG70793, LOC236010, LOC384852
Downstream geneInpp4b, LOC671182, Il15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129K01.bB6Ng01-129K01.g
ACCDH931162DH931163
length1,1671,096
definitionDH931162|Mus musculus domesticus DNA, BAC clone: B6Ng01-129K01, 5' end.DH931163|Mus musculus domesticus DNA, BAC clone: B6Ng01-129K01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,986,079 - 83,987,259)(83,845,460 - 83,846,591)
sequence
gaattcattaccatctataactgtagaaccaagccttcaagacagcccca
cgaacagaacattattttctagaacaaactgttttcagtatagcaacgca
tgcacactactcagtttctaaaacatatttgcataatactgaacagtgca
tatgtttgaaagctttatatttttaatttatacaactttagtgaagaaat
gaatcagattgtcagtgtgataatctttggaattaattgcttttgcaaat
agtatgaaacatactaccaattgtattgctgggtaattcctcatgcttat
tggcttagaaaataattagccaagaaaaaaatagaagtgaaagagtctta
gaattacagactaaatttagaaacatctacatttaaactgctgaaaggaa
gtgtaaatagaaaaataaagaaataagataaatacatgtttgtgcatgct
tacaagcaaccagacaggaaagtcttttgtttctgtgacccataattaaa
atctagatcaggaatcactaataagaaacctctgaggagatattgggatc
cacaccattagaaaggtgtgctcaatccatgcaagagacaggtagaaaga
aagcaacaactaaggccacttccacatttaacgcacagagaggttaggag
aaactcaattctaatcttgtattctatttcttttaaaaatacttttatgt
gattaacttcaaccccttttcaaagacaccctatgatatgtactggagat
ttcctcgagaattactatgaacctccaaactctcatatgctcaggtttcc
ataatatttacatatagcctatttatcgtcctatacacttagaactctgt
ctaggttatttacaatatcaaataaaaggtaaatgggtgtgggacgatgc
tatatccttttcatttagtgacaacaagataaaagtttgtttgacatgtt
tgacacattcaatgttcaccaaatatacatccatctccaatctgtggcta
agtggatgtgggagccaaatgtaacaaagtatcatagtttgctgaccatt
tcagtccctcagatattatttgattctttgctatttatcggaggaaatag
aaatattttttatacacaactttgtagaactccagacttctgtttcctgg
agaattttaagtcttta
gaattctgacaaatgctgcaacattatgagttttgaatgcaccgagccaa
ataaataagtcaatcacaaaaggaaaaatattgcattgcttgaagtatct
gagaaacttaagatagtcaatatcacaagcaacaaaagacagaatgggat
agacgagactggaaagtactgtttaatgggtgtggagtctcaatttataa
gatgaaggagttgtgaagatagagagtggcaatagttaattaaaatggca
atgtaaatgctgtcagcaacatgaactgcatccttaacatgattaagatg
gtaaagtttgtgctatgtatgtcataacctagttatatgcacgaaaaact
agtggaagttaacagagaagttaaaatgaatgggagttaatggaatatga
tgcagatgtttctgcagacatatcaaagtgccagtgctttgaacttcagc
tatcagccttgctcatgtcttctttttccttcttttctttcaatttttca
ttggtgcatatcacatatttatgggttttataatgacattttcattcaag
taaatcatgcatttgactatgttcatccctcctttcttcttttccataaa
attgagactcgtgtttttttttttttgattcaccaggcagtttcataact
ataattatttctacttttgtggtagttgacatattaataaggataatgtg
gtatttctttgccattttgatttaaatttacctagtgatttatcctttta
aatttcctgttgatatcataaacaacacacaggacacaacacaacaacaa
atcacagctttaagagtagggtttattttggctcacagttctgggctata
gttaccatagctagcagatcacaggcaacagcatcctgtgtgggcaattg
ctgcatcatgatttgggatttcttttttttctggaagcatagtcttagtt
ttagcagtttataagccttggatattctacaaacaatactttctgtgacc
aagtgagatctgtttgttcttataaatcctattgaatgttgctgccttga
ataccagccatggctctcaaagaataagatctgaaagattgccagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_83986079_83987259
seq2: B6Ng01-129K01.b_44_1210 (reverse)

seq1  TAAAGAATTTAAAATTTCCTCAGGAAACAGAAGTTCTGAAGTTCTACAAA  50
      |||||| ||  ||| |||  ||||||||||||| |||| |||||||||||
seq2  TAAAGACTT--AAAATTCTCCAGGAAACAGAAG-TCTGGAGTTCTACAAA  47

seq1  GTTGTGTATAAAAAATATTTTCTTATTTCTCTCTTTCGATAAATAGCAAA  100
      ||||||||||||||||||||   |||||| |||   ||||||||||||||
seq2  GTTGTGTATAAAAAATATTT--CTATTTC-CTC---CGATAAATAGCAAA  91

seq1  GAATCAAAT-ATATCTGAGGGACTGAAATGGTCAGCAAAACTATGAATAC  149
      ||||||||| |||||||||||||||||||||||||| |||||||| ||||
seq2  GAATCAAATAATATCTGAGGGACTGAAATGGTCAGC-AAACTATG-ATAC  139

seq1  TTTGTTACATTTGGCTCCCACATCCACTTAGCCAACAGATTGGAGATGGA  199
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTTGTTACATTTGGCTCCCACATCCACTTAGCC-ACAGATTGGAGATGGA  188

seq1  TGTATATTTGGTGAACAATTGAATTGTGTCAAACATGTCAAACAAACTTT  249
      |||||||||||||||| |||||| ||||||||||||||||||||||||||
seq2  TGTATATTTGGTGAAC-ATTGAA-TGTGTCAAACATGTCAAACAAACTTT  236

seq1  TATCTTGTTGTTCACTAAATGAAAAGGATATAGCATCGTCCCACACCCAT  299
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TATCTTGTTG-TCACTAAATGAAAAGGATATAGCATCGTCCCACACCCAT  285

seq1  TTACCTTTTATTTGATATTGTAAATAACCTAGACAGAGTTCTAAGTGTAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTTTTATTTGATATTGTAAATAACCTAGACAGAGTTCTAAGTGTAT  335

seq1  AGGACGATAAATAGGCTATATGTAAATATTATGGAAACCTGAGCATATGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACGATAAATAGGCTATATGTAAATATTATGGAAACCTGAGCATATGA  385

seq1  GAGTTTGGAGGTTCATAGTAATTCTCGAGGAAATCTCCAGTACATATCAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTGGAGGTTCATAGTAATTCTCGAGGAAATCTCCAGTACATATCAT  435

seq1  AGGGTGTCTTTGAAAAGGGGTTGAAGTTAATCACATAAAAGTATTTTTAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGTCTTTGAAAAGGGGTTGAAGTTAATCACATAAAAGTATTTTTAA  485

seq1  AAGAAATAGAATACAAGATTAGAATTGAGTTTCTCCTAACCTCTCTGTGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATAGAATACAAGATTAGAATTGAGTTTCTCCTAACCTCTCTGTGC  535

seq1  GTTAAATGTGGAAGTGGCCTTAGTTGTTGCTTTCTTTCTACCTGTCTCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAATGTGGAAGTGGCCTTAGTTGTTGCTTTCTTTCTACCTGTCTCTT  585

seq1  GCATGGATTGAGCACACCTTTCTAATGGTGTGGATCCCAATATCTCCTCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGATTGAGCACACCTTTCTAATGGTGTGGATCCCAATATCTCCTCA  635

seq1  GAGGTTTCTTATTAGTGATTCCTGATCTAGATTTTAATTATGGGTCACAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTTCTTATTAGTGATTCCTGATCTAGATTTTAATTATGGGTCACAG  685

seq1  AAACAAAAGACTTTCCTGTCTGGTTGCTTGTAAGCATGCACAAACATGTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAGACTTTCCTGTCTGGTTGCTTGTAAGCATGCACAAACATGTA  735

seq1  TTTATCTTATTTCTTTATTTTTCTATTTACACTTCCTTTCAGCAGTTTAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTTATTTCTTTATTTTTCTATTTACACTTCCTTTCAGCAGTTTAA  785

seq1  ATGTAGATGTTTCTAAATTTAGTCTGTAATTCTAAGACTCTTTCACTTCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGATGTTTCTAAATTTAGTCTGTAATTCTAAGACTCTTTCACTTCT  835

seq1  ATTTTTTTCTTGGCTAATTATTTTCTAAGCCAATAAGCATGAGGAATTAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTCTTGGCTAATTATTTTCTAAGCCAATAAGCATGAGGAATTAC  885

seq1  CCAGCAATACAATTGGTAGTATGTTTCATACTATTTGCAAAAGCAATTAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAATACAATTGGTAGTATGTTTCATACTATTTGCAAAAGCAATTAA  935

seq1  TTCCAAAGATTATCACACTGACAATCTGATTCATTTCTTCACTAAAGTTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAAGATTATCACACTGACAATCTGATTCATTTCTTCACTAAAGTTG  985

seq1  TATAAATTAAAAATATAAAGCTTTCAAACATATGCACTGTTCAGTATTAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATTAAAAATATAAAGCTTTCAAACATATGCACTGTTCAGTATTAT  1035

seq1  GCAAATATGTTTTAGAAACTGAGTAGTGTGCATGCGTTGCTATACTGAAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATATGTTTTAGAAACTGAGTAGTGTGCATGCGTTGCTATACTGAAA  1085

seq1  ACAGTTTGTTCTAGAAAATAATGTTCTGTTCGTGGGGCTGTCTTGAAGGC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTGTTCTAGAAAATAATGTTCTGTTCGTGGGGCTGTCTTGAAGGC  1135

seq1  TTGGTTCTACAGTTATAGATGGTAATGAATTC  1181
      ||||||||||||||||||||||||||||||||
seq2  TTGGTTCTACAGTTATAGATGGTAATGAATTC  1167

seq1: chr8_83845460_83846591
seq2: B6Ng01-129K01.g_67_1162

seq1  GAATTCTGACAAATGCTGCAACATTATGAGTTTTGAATGCACCGAGCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGACAAATGCTGCAACATTATGAGTTTTGAATGCACCGAGCCAA  50

seq1  ATAAATAAGTCAATCACAAAAGGAAAAATATTGCATTGCTTGAAGTATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAGTCAATCACAAAAGGAAAAATATTGCATTGCTTGAAGTATCT  100

seq1  GAGAAACTTAAGATAGTCAATATCACAAGCAACAAAAGACAGAATGGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACTTAAGATAGTCAATATCACAAGCAACAAAAGACAGAATGGGAT  150

seq1  AGACGAGACTGGAAAGTACTGTTTAATGGGTGTGGAGTCTCAATTTATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGAGACTGGAAAGTACTGTTTAATGGGTGTGGAGTCTCAATTTATAA  200

seq1  GATGAAGGAGTTGTGAAGATAGAGAGTGGCAATAGTTAATTAAAATGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAGGAGTTGTGAAGATAGAGAGTGGCAATAGTTAATTAAAATGGCA  250

seq1  ATGTAAATGCTGTCAGCAACATGAACTGCATCCTTAACATGATTAAGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAATGCTGTCAGCAACATGAACTGCATCCTTAACATGATTAAGATG  300

seq1  GTAAAGTTTGTGCTATGTATGTCATAACCTAGTTATATGCACGAAAAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGTTTGTGCTATGTATGTCATAACCTAGTTATATGCACGAAAAACT  350

seq1  AGTGGAAGTTAACAGAGAAGTTAAAATGAATGGGAGTTAATGGAATATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAAGTTAACAGAGAAGTTAAAATGAATGGGAGTTAATGGAATATGA  400

seq1  TGCAGATGTTTCTGCAGACATATCAAAGTGCCAGTGCTTTGAACTTCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATGTTTCTGCAGACATATCAAAGTGCCAGTGCTTTGAACTTCAGC  450

seq1  TATCAGCCTTGCTCATGTCTTCTTTTTCCTTCTTTTCTTTCAATTTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGCCTTGCTCATGTCTTCTTTTTCCTTCTTTTCTTTCAATTTTTCA  500

seq1  TTGGTGCATATCACATATTTATGGGTTTTATAATGACATTTTCATTCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGCATATCACATATTTATGGGTTTTATAATGACATTTTCATTCAAG  550

seq1  TAAATCATGCATTTGACTATGTTCATCCCTCCTTTCTTCTTTTCCATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCATGCATTTGACTATGTTCATCCCTCCTTTCTTCTTTTCCATAAA  600

seq1  ATTGAGACTCGTGTTTTTTTTTTTTTGATTCACCAGGCAGTTTCATAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGACTCGTGTTTTTTTTTTTTTGATTCACCAGGCAGTTTCATAACT  650

seq1  ATAATTATTTCTACTTTTGTGGTAGTTGACATATTAATAAGGATAATGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTATTTCTACTTTTGTGGTAGTTGACATATTAATAAGGATAATGTG  700

seq1  GTATTTCTTTGCCATTTTGATTTAAATTTACCTAGTGATTTATCCTTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTCTTTGCCATTTTGATTTAAATTTACCTAGTGATTTATCCTTTTA  750

seq1  AATTTCCTGTTGATATCATAAACAACAACAACAAGGACAACAACAACAAC  800
      |||||||||||||||||||||||||| |||   ||||| ||||| |||||
seq2  AATTTCCTGTTGATATCATAAACAAC-ACA--CAGGAC-ACAAC-ACAAC  795

seq1  AACAAATCACAGCTTTAAGGAGTAGGGGTTTATTTTGGCTCACAGTTCTG  850
      |||||||||||||||||| ||||| |||||||||||||||||||||||||
seq2  AACAAATCACAGCTTTAA-GAGTA-GGGTTTATTTTGGCTCACAGTTCTG  843

seq1  GGCTATAGTTTACCATAGCTAGCAGATCACAGGGCAACAGCATCCTGTGT  900
      |||||||| |||||||||||||||||||||| ||||||||||||||||||
seq2  GGCTATAG-TTACCATAGCTAGCAGATCACA-GGCAACAGCATCCTGTGT  891

seq1  GGGCAATTGCTGCATCATGATTTGGGATTTTCTTTTTTTCCTGGAAGCAT  950
      ||||||||||||||||||||||||||| ||||||||||| ||||||||||
seq2  GGGCAATTGCTGCATCATGATTTGGGA-TTTCTTTTTTTTCTGGAAGCAT  940

seq1  AGTCTTTAGTTTATAAGCAGTTTTATAAGCCTTTGAATATTCTACAAAAC  1000
      |||| ||||||  | ||||| |||||||||| ||| ||||||||| ||||
seq2  AGTC-TTAGTT--TTAGCAG-TTTATAAGCC-TTGGATATTCTAC-AAAC  984

seq1  AAATTACTTTCTGTTGACACAAGTGAGGATCTGTTTTGTTCTTTATTAAA  1050
      ||  ||||||||| |||| ||||||| |||||| |||||||||   ||||
seq2  AA--TACTTTCTG-TGAC-CAAGTGA-GATCTG-TTTGTTCTT--ATAAA  1026

seq1  TCCTAATGGAGTGGTTGCTGGCTCTGGAAATTACAAGCCATGGGCTCTCA  1100
      ||||| || |   ||||||| || ||   | ||| |||||| ||||||||
seq2  TCCTATTGAA--TGTTGCTGCCT-TG---AATACCAGCCAT-GGCTCTCA  1069

seq1  AAGAAATAAGATTCTGAAGAGATTGGCCCAGG  1132
      ||| ||||||| |||||| ||||||  |||||
seq2  AAG-AATAAGA-TCTGAA-AGATTG--CCAGG  1096