BAC Information

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BAC

Clone NameB6Ng01-129L01
Chromosome8 (Build37)
Map Location 49,385,442 - 49,543,664
singlet/doubletdoublet
Overlap geneOdz3
Upstream geneStox2, 4930448N21Rik, D030016E14Rik, Rwdd4a, LOC384819, LOC667422, Ing2, LOC546058, Cdkn2aip, LOC100039801, Cldn22, Wwc2, LOC100040113, Dctd
Downstream gene2900073C17Rik, LOC100039866, 4930555F03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129L01.bB6Ng01-129L01.g
ACCDH931207DH931208
length1,1741,007
definitionDH931207|Mus musculus domesticus DNA, BAC clone: B6Ng01-129L01, 5' end.DH931208|Mus musculus domesticus DNA, BAC clone: B6Ng01-129L01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(49,542,483 - 49,543,664)(49,385,442 - 49,386,463)
sequence
gaattcataaacacaaacgggcctatttataaagtaaaattgttccattt
ttaaagaatcaccaagaacccttttatatttacagaatcgtaactttaat
tgtaaattttttttacctactaaagataattgcccccccttacaaatatt
tttttcaagcatgcttatggtagtcttctttattggattagctcagaaaa
tcagaacattgtactttaacctaaccttgaagtaacagtgacctctaaga
tcaacccttgtgcagatgagttttgtgggaaatgactttaaatttctgtt
gtttctccttttaccgccagcatgctggttcacgggtgtgtattgctgtt
tctggctggttatgtggtcctggggattttacccagagcttatagcatgc
taggctatcacgctgtcaactgagttagatccccaaccaccctgtgctat
ggggaagagatagaaaagaaaatcaagacaagtagctctcactttaagca
tcctgacccaactgggcatacatgttgcgttcttgtatctcctctgagtt
cctaggacaaggcaaagaaagacctggctagtgtgaaagtggaagtcact
gaaccagtactccagatccatttattctaagcatcatgctttcttcacaa
tccatgtaacatgtcctcagagtgagtttcccaacatggctgccagacat
tctctgtcttaatgtgccttgtcctagccgctgtggtgttttgtttgttt
gtttgtttgtttaacctgaatttctagcatcatgtaaaatattggatgaa
gatattccttatatcagatcagactgggaaaaacacagggagatattatc
aaacccacatgaagattaaggcagttataactggaattttatttattgtt
catatgccagctcaaaccacttaaattttttgtaaactgaacacccaaac
taaagataatgcattgactttttgcaattgcttctcttcacaatttgttg
aaggagctagcttcagctttatatttccaaacatttttttttaatggagt
gagtgactagtgtcttatttaaggtaacagaatgagccatcgtacaagaa
acctaaaatggggagctgtatccgtgctaatagccttctcatgtgatgaa
tcttgccttgctcagcctaatcat
gaattccagggcaatctgtaaatctgctgggaccacaaagtacaagattt
aagtgggcaatgagaaacacgtgtgcagcagcttctaagctgctcctggg
gctcggtgcatgattgccgtcaatggctgcagacccaggagttctgcgta
aatcatctgcctctgcccagcgagacgcgagacacctgctttcagtttct
ggttgattttcaggtcattactgctctgtaaaacaccagtcaaacagctt
atgcaaccttactgccatgccgttagcagctccattacattaattcataa
ttatttagtgagcccagcttaaaaaaaaaaaaaaaaaaaaagaagtgcac
ttctctttgccttttggggtcttttcatcatgctttctgaaatgtttcca
actgggctcaaaaaaaaaaaaaatcagctggttaaatgaagatttattga
ctccttaacgggatgtcctgttaaatgtcaggtattgaaattgacaaagt
atgtgaacagtgtcaaaaatgctcaaaatgggaagtttgatgaagaattt
tgcaaaaaaggaaaaaaaaaccacatataagcagttttctcaaacacacc
catcagcatttcacacaaagcctgcagaactgttctcaagacccttatga
ggaaagcaagcattaacctcttattgaacggactttctccagggagcacg
tgggtgctatccgatccaatcaggaaactgattcggtcatagaaggactt
ggcagcttgctgaaatggtgtcttgaaggcttggctaatgatatcctgag
gatcaggcaagccacgacagtagggctggttttggcaggagctctggagg
cagcaatcaggatccatgcagtcaatgagtccgtctgcagaggaagcagc
aaaccgtagcggctagccgatctgctctgtgtgccacgcaagcgtggggg
tgacttggtgtctactggcggtgtctgcagtaattgccactgtgattgat
gctatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_49542483_49543664
seq2: B6Ng01-129L01.b_46_1219 (reverse)

seq1  ATGATTAGGCTGAGCAGGGGCCCAGA-TCATCA-ATGAGGAAGGCTATTA  48
      |||||||||||||||| ||  | ||| |||||| |||| |||||||||||
seq2  ATGATTAGGCTGAGCAAGG--CAAGATTCATCACATGA-GAAGGCTATTA  47

seq1  ACACAGATTAACAAGGTCCCC--TTTAGGTTTCTTTGTAAACGATGGCTC  96
       ||| |||  || || |||||  |||||||||| ||||  ||||||||||
seq2  GCACGGAT--AC-AGCTCCCCATTTTAGGTTTC-TTGT--ACGATGGCTC  91

seq1  A-TCTGTTACCTTAAATAAGACACTAGTCACTCACTCCATTAAAAAAAAA  145
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTTACCTTAAATAAGACACTAGTCACTCACTCCATTAAAAAAAAA  141

seq1  TGTTTGGAAATATTAAAAGCTGAAAGCTAGCTCCTTCAACAAATTGTGGA  195
      |||||||||||||  ||||||| |||||||||||||||||||||||| ||
seq2  TGTTTGGAAATAT--AAAGCTG-AAGCTAGCTCCTTCAACAAATTGT-GA  187

seq1  AGAGAAGCAATTGCAAAAAGTCAAATGCATTATACTTTAGTTTGGGTGTT  245
      |||||||||||||||||||||| |||||||||| ||||||||||||||||
seq2  AGAGAAGCAATTGCAAAAAGTC-AATGCATTAT-CTTTAGTTTGGGTGTT  235

seq1  CAGTTTACAAAAA--TTAAGTGGTTTGAGCTGGCATATGAACAATAAATA  293
      |||||||||||||  |||||||||||||||||||||||||||||||||||
seq2  CAGTTTACAAAAAATTTAAGTGGTTTGAGCTGGCATATGAACAATAAATA  285

seq1  AAATTCCAGTTATAACTGCCTTAATCTTCATGTGGGTTTGATAATATCTC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCAGTTATAACTGCCTTAATCTTCATGTGGGTTTGATAATATCTC  335

seq1  CCTGTGTTTTTCCCAGTCTGATCTGATATAAGGAATATCTTCATCCAATA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTTTTTCCCAGTCTGATCTGATATAAGGAATATCTTCATCCAATA  385

seq1  TTTTACATGATGCTAGAAATTCAGGTTAAACAAACAAACAAACAAACAAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACATGATGCTAGAAATTCAGGTTAAACAAACAAACAAACAAACAAA  435

seq1  ACACCACAGCGGCTAGGACAAGGCACATTAAGACAGAGAATGTCTGGCAG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCACAGCGGCTAGGACAAGGCACATTAAGACAGAGAATGTCTGGCAG  485

seq1  CCATGTTGGGAAACTCACTCTGAGGACATGTTACATGGATTGTGAAGAAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTTGGGAAACTCACTCTGAGGACATGTTACATGGATTGTGAAGAAA  535

seq1  GCATGATGCTTAGAATAAATGGATCTGGAGTACTGGTTCAGTGACTTCCA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGATGCTTAGAATAAATGGATCTGGAGTACTGGTTCAGTGACTTCCA  585

seq1  CTTTCACACTAGCCAGGTCTTTCTTTGCCTTGTCCTAGGAACTCAGAGGA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACACTAGCCAGGTCTTTCTTTGCCTTGTCCTAGGAACTCAGAGGA  635

seq1  GATACAAGAACGCAACATGTATGCCCAGTTGGGTCAGGATGCTTAAAGTG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAAGAACGCAACATGTATGCCCAGTTGGGTCAGGATGCTTAAAGTG  685

seq1  AGAGCTACTTGTCTTGATTTTCTTTTCTATCTCTTCCCCATAGCACAGGG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTACTTGTCTTGATTTTCTTTTCTATCTCTTCCCCATAGCACAGGG  735

seq1  TGGTTGGGGATCTAACTCAGTTGACAGCGTGATAGCCTAGCATGCTATAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGGGGATCTAACTCAGTTGACAGCGTGATAGCCTAGCATGCTATAA  785

seq1  GCTCTGGGTAAAATCCCCAGGACCACATAACCAGCCAGAAACAGCAATAC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGGTAAAATCCCCAGGACCACATAACCAGCCAGAAACAGCAATAC  835

seq1  ACACCCGTGAACCAGCATGCTGGCGGTAAAAGGAGAAACAACAGAAATTT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCGTGAACCAGCATGCTGGCGGTAAAAGGAGAAACAACAGAAATTT  885

seq1  AAAGTCATTTCCCACAAAACTCATCTGCACAAGGGTTGATCTTAGAGGTC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCATTTCCCACAAAACTCATCTGCACAAGGGTTGATCTTAGAGGTC  935

seq1  ACTGTTACTTCAAGGTTAGGTTAAAGTACAATGTTCTGATTTTCTGAGCT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTACTTCAAGGTTAGGTTAAAGTACAATGTTCTGATTTTCTGAGCT  985

seq1  AATCCAATAAAGAAGACTACCATAAGCATGCTTGAAAAAAATATTTGTAA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAATAAAGAAGACTACCATAAGCATGCTTGAAAAAAATATTTGTAA  1035

seq1  GGGGGGGCAATTATCTTTAGTAGGTAAAAAAAATTTACAATTAAAGTTAC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGCAATTATCTTTAGTAGGTAAAAAAAATTTACAATTAAAGTTAC  1085

seq1  GATTCTGTAAATATAAAAGGGTTCTTGGTGATTCTTTAAAAATGGAACAA  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTGTAAATATAAAAGGGTTCTTGGTGATTCTTTAAAAATGGAACAA  1135

seq1  TTTTACTTTATAAATAGGCCCGTTTGTGTTTATGAATTC  1182
      |||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTTTATAAATAGGCCCGTTTGTGTTTATGAATTC  1174

seq1: chr8_49385442_49386463
seq2: B6Ng01-129L01.g_69_1075

seq1  GAATTCCAGGGCAATCTGTAAATCTGCTGGGACCACAAAGTACAAGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGCAATCTGTAAATCTGCTGGGACCACAAAGTACAAGATTT  50

seq1  AAGTGGGCAATGAGAAACACGTGTGCAGCAGCTTCTAAGCTGCTCCTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGCAATGAGAAACACGTGTGCAGCAGCTTCTAAGCTGCTCCTGGG  100

seq1  GCTCGGTGCATGATTGCCGTCAATGGCTGCAGACCCAGGAGTTCTGCGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGGTGCATGATTGCCGTCAATGGCTGCAGACCCAGGAGTTCTGCGTA  150

seq1  AATCATCTGCCTCTGCCCAGCGAGACGCGAGACACCTGCTTTCAGTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATCTGCCTCTGCCCAGCGAGACGCGAGACACCTGCTTTCAGTTTCT  200

seq1  GGTTGATTTTCAGGTCATTACTGCTCTGTAAAACACCAGTCAAACAGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGATTTTCAGGTCATTACTGCTCTGTAAAACACCAGTCAAACAGCTT  250

seq1  ATGCAACCTTACTGCCATGCCGTTAGCAGCTCCATTACATTAATTCATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAACCTTACTGCCATGCCGTTAGCAGCTCCATTACATTAATTCATAA  300

seq1  TTATTTAGTGAGCCCAGCTTAAAAAAAAAAAAAAAAAAAAAGAAGTGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAGTGAGCCCAGCTTAAAAAAAAAAAAAAAAAAAAAGAAGTGCAC  350

seq1  TTCTCTTTGCCTTTTGGGGTCTTTTCATCATGCTTTCTGAAATGTTTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTGCCTTTTGGGGTCTTTTCATCATGCTTTCTGAAATGTTTCCA  400

seq1  ACTGGGCTCAAAAAAAAAAAAAATCAGCTGGTTAAATGAAGATTTATTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGCTCAAAAAAAAAAAAAATCAGCTGGTTAAATGAAGATTTATTGA  450

seq1  CTCCTTAACGGGATGTCCTGTTAAATGTCAGGTATTGAAATTGACAAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTAACGGGATGTCCTGTTAAATGTCAGGTATTGAAATTGACAAAGT  500

seq1  ATGTGAACAGTGTCAAAAATGCTCAAAATGGGAAGTTTGATGAAGAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAACAGTGTCAAAAATGCTCAAAATGGGAAGTTTGATGAAGAATTT  550

seq1  TGCAAAAAAGGAAAAAAAAACCACATATAAGCAGTTTTCTCAAACACACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAAAAGGAAAAAAAAACCACATATAAGCAGTTTTCTCAAACACACC  600

seq1  CATCAGCATTTCACACAAAGCCTGCAGAACTGTTCTCAAGACCCTTATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGCATTTCACACAAAGCCTGCAGAACTGTTCTCAAGACCCTTATGA  650

seq1  GGAAAGCAAGCATTAACCTCTTATTGAACGGACTTTCTCCAGGGAGCACG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGCAAGCATTAACCTCTTATTGAACGGACTTTCTCCAGGGAGCACG  700

seq1  TGGGTGCTATCCGATCCAATCAGGAAACTGATTCGGTCATAGAAGGACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGCTATCCGATCCAATCAGGAAACTGATTCGGTCATAGAAGGACTT  750

seq1  GGCAGCTTGCTGAGATGGTGTC-TGAAGGCTTTGGCTAATGATATCCTGA  799
      ||||||||||||| |||||||| ||||||| |||||||||||||||||||
seq2  GGCAGCTTGCTGAAATGGTGTCTTGAAGGC-TTGGCTAATGATATCCTGA  799

seq1  GGATCAGGCAAGCCACGACAGTAGGGCTGGTTTTGGCAGGAGCTCTGGAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAGGCAAGCCACGACAGTAGGGCTGGTTTTGGCAGGAGCTCTGGAG  849

seq1  GCAGCAATCAGGATCCATGCAGTCAATGAGTCCGTCTGCAGAGGAAGCAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAATCAGGATCCATGCAGTCAATGAGTCCGTCTGCAGAGGAAGCAG  899

seq1  CAAACCGGTTAGCCGGCTAGCCCGATCTGCTCCGTGTGCCACGCACAGCG  949
      |||||||  ||| ||||||| ||||||||||| |||||||||||| ||||
seq2  CAAACCG--TAG-CGGCTAG-CCGATCTGCTCTGTGTGCCACGCA-AGCG  944

seq1  T-GGGGTGACTT-GTGTCTACTGGCGGGTTTGTTTCATGGCAGTTAATTT  997
      | |||||||||| ||||||||||||||   ||| |    |||||  | ||
seq2  TGGGGGTGACTTGGTGTCTACTGGCGG---TGTCT----GCAGT--AATT  985

seq1  GCCACTGTGTATCTGATGGCTATCT  1022
      ||||||||| || |||| |||||||
seq2  GCCACTGTG-AT-TGAT-GCTATCT  1007