BAC Information

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BAC

Clone NameB6Ng01-129O21
Chromosome8 (Build37)
Map Location 79,281,111 - 79,282,195
singlet/doubletsinglet
Overlap geneLOC100039211
Upstream gene1700007B14Rik, LOC100039185, EG631594, LOC666226
Downstream geneLOC384847, Nr3c2, Arhgap10, LOC100039235, AI931714, Tmem34, Ednra
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129O21.bB6Ng01-129O21.g
ACCDH931388DH931389
length1,0771,102
definitionDH931388|Mus musculus domesticus DNA, BAC clone: B6Ng01-129O21, 5' end.DH931389|Mus musculus domesticus DNA, BAC clone: B6Ng01-129O21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagttcctggaactcatgatgagaaaagaactgacacccacaatg
tgtcctctggcctccaagcatactctgtggcaaatcaatgctgtagtgac
tggctagtacaggagctgcagaaagaacttggaatttcatttgccctcag
gcaggagatagcatctcagttttctaacatctagatagatattagtggta
ttttctaattcagatgtttgcaacttttgaataagctaatgactggtagt
gtttcctaatctataagactctttacaattcctaatgtttgtaagtttat
cagaggaactatttgtctgaaatttggattctccagttacactctaaagg
gtaaggatacctgtgattccagtggtgccatggcacacatggctacgaat
ttggttgaagatattaattctctcttagaaataagccaaacagcagctct
ggtctcttttgagctcttctcttcttaataattctgtctgtctgtctgtc
tgtctgtctgtctgtctgtgtgtgtctgtatctgtgtgtgtctgtctata
tatctgtgtctgtgtgcctgtgtgtatttgtctgtctgtctatgtctctg
tatgtgtgtctgtgtgtgtgtaccattgttgttttgtttatatatattct
gtttgtttctttctatcagttggcttactacagactttgtaacccacatt
gaccttgaactgcttcctcaacctcctgtcttctaccaggtgctgggatc
accacaagtgtgcaccatcacacttggctaatattttttatctttacaat
taatagaaatctgatatcatgattagagcatgcaaaggagttcttgaaat
agttttttatatctccaggtagcagtctctatttcactatatatttacaa
atttttctatatacttcttttatttattataaaagactattgttggaatg
tggactatcctatcaaattttgactataattttgctttataagaataaat
atgatttccctatccttatgtcagtactatcttcatgtggcataacccag
atttctctctgcctcaccttacttcaa
gaattcttaaccgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttagtcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgactgc
agatgctggcaaggatgtggagaaagaagaacactccttcactgttggtg
ggattgcaagcttgtacaaccactctgaaaatcagtctggcggttcctta
gaaaattggacatagtactaccggaggatccagcaatacctcttctaggc
atatatccagaagatgtcccaaccggtatgaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggttggacctggagggcatcatcctgagtgaggtaacacaatcacaaa
agaactcaaataatatgtacttactgataagtggatattagcccagaaac
ttagtatagtgagatataaggtacaatttgcaaaacacatgaaactgaag
aagaacgaagaccaaagtgtggacactttgccccttcttagaattggaaa
caatcacgcatggaaggagttacagagacaaagtttggagctgagacaaa
aggatggaccatctagagactgccatatccagggatccatcccataatta
gcctttacagcttttaatatcctccattttgttctgtgtatttagtgttt
tgattataatgtgacaagagaattttttttctagtccaatctatttggtg
ttctgtaggcttctttttaacatttatggccatctctctttagttaagga
aagttttcttctatattttttgttgagatgttttctggtctttgagctgg
attcttcaccctcttcaattcctatatcttagattcatctttatgggtct
tcacttcggaatttgagttaggagctctaccttggcattttcctttgacc
ga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_79281111_79282195
seq2: B6Ng01-129O21.b_51_1127

seq1  GAATTCAGTTCCTGGAACTCATGATGAGAAAAGAACTGACACCCACAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTCCTGGAACTCATGATGAGAAAAGAACTGACACCCACAATG  50

seq1  TGTCCTCTGGCCTCCAAGCATACTCTGTGGCAAATCAATGCTGTAGTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCTGGCCTCCAAGCATACTCTGTGGCAAATCAATGCTGTAGTGAC  100

seq1  TGGCTAGTACAGGAGCTGCAGAAAGAACTTGGAATTTCATTTGCCCTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTAGTACAGGAGCTGCAGAAAGAACTTGGAATTTCATTTGCCCTCAG  150

seq1  GCAGGAGATAGCATCTCAGTTTTCTAACATCTAGATAGATATTAGTGGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAGATAGCATCTCAGTTTTCTAACATCTAGATAGATATTAGTGGTA  200

seq1  TTTTCTAATTCAGATGTTTGCAACTTTTGAATAAGCTAATGACTGGTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAATTCAGATGTTTGCAACTTTTGAATAAGCTAATGACTGGTAGT  250

seq1  GTTTCCTAATCTATAAGACTCTTTACAATTCCTAATGTTTGTAAGTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCTAATCTATAAGACTCTTTACAATTCCTAATGTTTGTAAGTTTAT  300

seq1  CAGAGGAACTATTTGTCTGAAATTTGGATTCTCCAGTTACACTCTAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGAACTATTTGTCTGAAATTTGGATTCTCCAGTTACACTCTAAAGG  350

seq1  GTAAGGATACCTGTGATTCCAGTGGTGCCATGGCACACATGGCTACGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGATACCTGTGATTCCAGTGGTGCCATGGCACACATGGCTACGAAT  400

seq1  TTGGTTGAAGATATTAATTCTCTCTTAGAAATAAGCCAAACAGCAGCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTGAAGATATTAATTCTCTCTTAGAAATAAGCCAAACAGCAGCTCT  450

seq1  GGTCTCTTTTGAGCTCTTCTCTTCTTAATAATTCTGTCTGTCTGTCTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCTTTTGAGCTCTTCTCTTCTTAATAATTCTGTCTGTCTGTCTGTC  500

seq1  TGTCTGTCTGTCTGTCTGTGTGTGTCTGTATCTGTGTGTGTCTGTCTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTCTGTCTGTCTGTGTGTGTCTGTATCTGTGTGTGTCTGTCTATA  550

seq1  TATCTGTGTCTGTGTGCCTGTGTGTATTTGTCTGTCTGTCTATGTCTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTGTCTGTGTGCCTGTGTGTATTTGTCTGTCTGTCTATGTCTCTG  600

seq1  TATGTGTGTCTGTGTGTGTGTACCATTGTTGTTTTGTTTATATATATTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTGTCTGTGTGTGTGTACCATTGTTGTTTTGTTTATATATATTCT  650

seq1  GTTTGTTTCTTTCTATCAGTTGGCTTACTACAGACTTTGTAACCCACATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTCTTTCTATCAGTTGGCTTACTACAGACTTTGTAACCCACATT  700

seq1  GACCTTGAACTGCTTCCTCAACCTCCTGTCTTCTACCAGGTGCTGGGATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTGAACTGCTTCCTCAACCTCCTGTCTTCTACCAGGTGCTGGGATC  750

seq1  ACCACAAGTGTGCACCATCACACTTGGCTAATATTTTTTATCTTTACAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAAGTGTGCACCATCACACTTGGCTAATATTTTTTATCTTTACAAT  800

seq1  TAATAGAAATCTGATATCATGATTAGAGCATGCAAAGGAGTTCTTGAAAA  850
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TAATAGAAATCTGATATCATGATTAGAGCATGCAAAGGAGTTCTTG-AAA  849

seq1  TAGTTTTTTATATCTCCAGGTAGCAGTCTCTATTTCACTATATATTTACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTTTATATCTCCAGGTAGCAGTCTCTATTTCACTATATATTTACA  899

seq1  AATTTTTCTATATACTTCTTTTATTTATTATAAAAGACTATTGTTGGAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTCTATATACTTCTTTTATTTATTATAAAAGACTATTGTTGGAAT  949

seq1  GTGGACTATCCTATCAAATTTTGACTAATAATTTTGCTTTATAAGAATAA  1000
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GTGGACTATCCTATCAAATTTTGACT-ATAATTTTGCTTTATAAGAATAA  998

seq1  ATATGATTTCCCTTATCCTTATGTCAGTAACTATCCTTCAATGT-GCATA  1049
      |||||||||||| ||||||||||||||| ||||| |||| |||| |||| 
seq2  ATATGATTTCCC-TATCCTTATGTCAGT-ACTAT-CTTC-ATGTGGCAT-  1043

seq1  AACCCAGATTTCTCTCTGCCCTCACCTTTACTTCAA  1085
      |||||||||||||||||| ||||||| |||||||||
seq2  AACCCAGATTTCTCTCTG-CCTCACC-TTACTTCAA  1077