BAC Information

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BAC

Clone NameB6Ng01-130E15
Chromosome8 (Build37)
Map Location 67,340,158 - 67,512,610
singlet/doubletdoublet
Overlap geneLOC100040903, LOC619647, 3110005G23Rik, Trim75
Upstream geneEG244495, Tll1, LOC100040989, Cpe, Sc4mol, Klhl2
Downstream geneTrim60, LOC665388, LOC665396, LOC100040949, LOC665405, Vaultrc-ps1, LOC100040967, March1, LOC100040986
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130E15.bB6Ng01-130E15.g
ACCDH931643DH931644
length1,018435
definitionDH931643|Mus musculus domesticus DNA, BAC clone: B6Ng01-130E15, 5' end.DH931644|Mus musculus domesticus DNA, BAC clone: B6Ng01-130E15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,340,158 - 67,341,176)(67,512,170 - 67,512,610)
sequence
gaattcataactaaatgaaaaataaaaatcataaaggcttaaaaggaagc
atctttttaacttagcataatagtgttgtatttgtctagatcatggatgc
tattaaggatttcagtcaactgacacttagtgagcatacactccacactg
caagctgggatacgtaaattcacagcaaatagcacatcatctacttgttt
gtttgtttgcttttttttaaattaagtcatccaagtcttaaaagatcaaa
gatgttcctatggctaaaactgtccccatcgagatccttcaatccagact
cctgaggccatgcaccaactggtaacttcatttatccattctgaatgaga
taagttaaaactaaatgggggctcagaggttaagggcacctaactagttt
tacaaaatgacttgggattcagttcccagcacccacattggcagcttaca
actgtccataattcagtttcaggggactgaatgccccattctaccatccg
tgggtactgtactcatgcacaaacccacacatagatgtatatgtacacaa
aactaaaatgaaaataaacctacatgtgggaaactacctttcctggatgt
gtgtagctacctcccttcatcaaaacctctcattataacaaatggagacc
atcccagaaaaccacaacagggcacaatgcagagctcaatgaatcatgag
gggcccaggcccagcagatccatgcacatcacagctcctgcatctatggc
tcagaacaccataggagagctagaataccaagagatgtgaaaaagtctct
cttagaaatggctgcgcaaataatgccagaacaatgtaaatatcaatgaa
catgttagtatggaagggaaatttctgtggggtcccattcctagacaaag
aactaaaggcaaccagtgactactgagagagggagagtaggctctcccag
gaatgagccctcttttgcagtggtcaaccttgaagactgggagggtggga
aggagggaaaggagggga
tgttactctatggaatttgctcagatctttaagtgccttggaaatgttca
ggatctctgcagactgtcaatgctgtctgcttctgccagctgccttgctg
cctttttggaagagaggtctccctccttcgtaaggcctgtcctgggtcag
tgatctgggttctgcctgtgcctcagtggagccgaaaggaagccaaatac
attccctcaaagtgacaaggtagtgattctaaggcggagggagtgagggg
tcagtcaggcaacccaggtgtccttgtagacgggtgtgatgtttaagggc
acagtgtgcaggggcccacagaactttccagtaaaggaatgaggcaaagg
acaggtgcctcagctggagcaaagaggtcaatgctgcctcaggaaggaga
aggttgggggaggagcaggtagtgtgtgggaggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_67340158_67341176
seq2: B6Ng01-130E15.b_46_1063

seq1  GAATTCATAACTAAATGAAAAATAAAAATCATAAAGGCTTAAAAGGAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAACTAAATGAAAAATAAAAATCATAAAGGCTTAAAAGGAAGC  50

seq1  ATCTTTTTAACTTAGCATAATAGTGTTGTATTTGTCTAGATCATGGATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTTAACTTAGCATAATAGTGTTGTATTTGTCTAGATCATGGATGC  100

seq1  TATTAAGGATTTCAGTCAACTGACACTTAGTGAGCATACACTCCACACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAGGATTTCAGTCAACTGACACTTAGTGAGCATACACTCCACACTG  150

seq1  CAAGCTGGGATACGTAAATTCACAGCAAATAGCACATCATCTACTTGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTGGGATACGTAAATTCACAGCAAATAGCACATCATCTACTTGTTT  200

seq1  GTTTGTTTGCTTTTTTTTAAATTAAGTCATCCAAGTCTTAAAAGATCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTGCTTTTTTTTAAATTAAGTCATCCAAGTCTTAAAAGATCAAA  250

seq1  GATGTTCCTATGGCTAAAACTGTCCCCATCGAGATCCTTCAATCCAGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTCCTATGGCTAAAACTGTCCCCATCGAGATCCTTCAATCCAGACT  300

seq1  CCTGAGGCCATGCACCAACTGGTAACTTCATTTATCCATTCTGAATGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGGCCATGCACCAACTGGTAACTTCATTTATCCATTCTGAATGAGA  350

seq1  TAAGTTAAAACTAAATGGGGGCTCAGAGGTTAAGGGCACCTAACTAGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTAAAACTAAATGGGGGCTCAGAGGTTAAGGGCACCTAACTAGTTT  400

seq1  TACAAAATGACTTGGGATTCAGTTCCCAGCACCCACATTGGCAGCTTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAATGACTTGGGATTCAGTTCCCAGCACCCACATTGGCAGCTTACA  450

seq1  ACTGTCCATAATTCAGTTTCAGGGGACTGAATGCCCCATTCTACCATCCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCCATAATTCAGTTTCAGGGGACTGAATGCCCCATTCTACCATCCG  500

seq1  TGGGTACTGTACTCATGCACAAACCCACACATAGATGTATATGTACACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTACTGTACTCATGCACAAACCCACACATAGATGTATATGTACACAA  550

seq1  AACTAAAATGAAAATAAACCTACATGTGGGAAACTACCTTTCCTGGATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAAATGAAAATAAACCTACATGTGGGAAACTACCTTTCCTGGATGT  600

seq1  GTGTAGCTACCTCCCTTCATCAAAACCTCTCATTATAACAAATGGAGACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGCTACCTCCCTTCATCAAAACCTCTCATTATAACAAATGGAGACC  650

seq1  ATCCCAGAAAACCACAACAGGGCACAATGCAGAGCTCAATGAATCATGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAGAAAACCACAACAGGGCACAATGCAGAGCTCAATGAATCATGAG  700

seq1  GGGCCCAGGCCCAGCAGATCCATGCACATCACAGCTCCTGCATCTATGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCAGGCCCAGCAGATCCATGCACATCACAGCTCCTGCATCTATGGC  750

seq1  TCAGAACACCATAGGAGAGCTAGAATACCAAGAGATGTGAAAAAGTCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACACCATAGGAGAGCTAGAATACCAAGAGATGTGAAAAAGTCTCT  800

seq1  CTTAGAAATGGCTGCGCAAATAATGCCAGAACAATGTAAATATCAATGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAAATGGCTGCGCAAATAATGCCAGAACAATGTAAATATCAATGAA  850

seq1  CATGTTAGTATGGAAGGGAAATTTCTGTGGGGTCCCATCCCTAGACAAAG  900
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CATGTTAGTATGGAAGGGAAATTTCTGTGGGGTCCCATTCCTAGACAAAG  900

seq1  AACTAAAGGCAACCAGTGACTACTGAGAGAGGGAGAGTTAGCCTCTCCCA  950
      ||||||||||||||||||||||||||||||||||||| ||| ||||||||
seq2  AACTAAAGGCAACCAGTGACTACTGAGAGAGGGAGAG-TAGGCTCTCCCA  949

seq1  GGAATGAGCCCCCTTTTGCAGTGGTCAACCCTGAGACCTGGGAGGGGTGG  1000
      ||||||||||| |||||||||||||||||| |||   |||||||||  ||
seq2  GGAATGAGCCCTCTTTTGCAGTGGTCAACCTTGAAGACTGGGAGGGTGGG  999

seq1  AAGGAGGGAAAGGAGGGGA  1019
      |||||||||||||||||||
seq2  AAGGAGGGAAAGGAGGGGA  1018

seq1: chr8_67512170_67512610
seq2: B6Ng01-130E15.g_69_509 (reverse)

seq1  CTCCTCCCACACACTACCTGCTCCTCCCCCAACCTTCTCCTTCCTGAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCCACACACTACCTGCTCCTCCCCCAACCTTCTCCTTCCTGAGGC  50

seq1  AGCATTGACCTCTTTGCTCCAGCTGAGGCACCTGTCCTTTGCCTCATTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGACCTCTTTGCTCCAGCTGAGGCACCTGTCCTTTGCCTCATTCC  100

seq1  TTTACTGGAAAGTTCTGTGGGCCCCTGCACACTGTGCCCTTAAACATCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTGGAAAGTTCTGTGGGCCCCTGCACACTGTGCCCTTAAACATCAC  150

seq1  ACCCGTCTACAAGGACACCTGGGTTGCCTGACTGACCCCTCACTCCCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGTCTACAAGGACACCTGGGTTGCCTGACTGACCCCTCACTCCCTCC  200

seq1  GCCTTAGAATCACTACCTTGTCACTTTGAGGGAATGTATTTGGCTTCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTAGAATCACTACCTTGTCACTTTGAGGGAATGTATTTGGCTTCCTT  250

seq1  TCGGCTCCACTGAGGCACAGGCAGAACCCAGATCACTGACCCAGGACAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCTCCACTGAGGCACAGGCAGAACCCAGATCACTGACCCAGGACAGG  300

seq1  CCTTACGAAGGAGGGAGACCTCTCTTCCAAAAAGGCAGCAAGGCAGCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACGAAGGAGGGAGACCTCTCTTCCAAAAAGGCAGCAAGGCAGCTGG  350

seq1  CAGAAGCAGACAGCATTGACAGTCTGCAGAGATCCTGAACATTTCCAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCAGACAGCATTGACAGTCTGCAGAGATCCTGAACATTTCCAAGG  400

seq1  CACTTAAAGATCTGAGCAAATTCCATAGAGTAACAGAATTC  441
      |||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAAAGATCTGAGCAAATTCCATAGAGTAACAGAATTC  441