BAC Information

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BAC

Clone NameB6Ng01-130G12
Chromosome8 (Build37)
Map Location 18,653,948 - 18,750,782
singlet/doubletdoublet
Overlap geneMcph1, Angpt2
Upstream geneLOC665638, LOC100040466
Downstream geneAgpat5, LOC100040486, Xkr5, Defb40, Defb37, Defb38, Defb39, Defb12, Defb34, EG546038, Spag11, Defb14, Defb4, EG654452, Defb6, EG574081, Defb5, Defb3, Defb54-ps, LOC100040504, LOC100040514, Defb8, LOC100040528, LOC100041511, Defb7, LOC670326, LOC100040561, LOC624198, EG665730, 4930467E23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130G12.bB6Ng01-130G12.g
ACCDH931729DH931730
length1,0991,078
definitionDH931729|Mus musculus domesticus DNA, BAC clone: B6Ng01-130G12, 5' end.DH931730|Mus musculus domesticus DNA, BAC clone: B6Ng01-130G12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(18,653,948 - 18,655,051)(18,749,701 - 18,750,782)
sequence
gaattctaagcacacgcatacgcctctgcctaaggaatgtcgggtagcct
caattagattacaggatcaatttcatttctcctgatactacccattcagt
cagcccctgaggttcctaaaatgcttccccatgttaataaggcattccag
gtacccaaaggccccagtcagtgacctttgctcatcctggatgttcctac
cctcagtcccccaaatcattataagctttggatcatcctaagtaaaattg
atctgcccactgacagctggtcccggtgtggagtgtggttcatcaccata
tacatattcacagggtttctgacccctccccctaccctacatgtagtctc
tgcttccaggatagaaacttaccttccactttgttgggcagggggtaacc
aagggaacctattaactattcaaaggtttccttgtggctaataaattttt
actcataactgaccatagttaacttggagcttgaaattagagcacttcag
aaagcctttttattcaaatgcatgattatcacagtcatagtgaaagacct
gttgagctagtcttgtcgtggctgttcccagcctttatggaaaccatctt
cccaggcatttaaggtagctgtgataggacacatgggagaacaccccagc
cattaggcaggtggctttattgagagtgaggtgacacagtggacacactg
ataatgagtgtccagaggccaggaagggctagacctcccatttcgtgaga
cagaaaagctacaggagcctaggagaactaaaacttgggccagcccaaca
aagaggatgagaaagtagagagctcggcactctgatgtactctgtgctct
tagcctgttcctgggagtttgacactctgatgtactcctcttaacctgtc
gctgcagttgggagagagatggaagacgagcatagtctgagatcagactc
ctaagaactacacgcacagctatccctataaaactttatctttttcagat
accgtgcttaatcaatgaaagaagcccatgactgctcttaggtatggcag
gaagaaagggttattgtagatgtggagggagatatagcccgacatatct
gaattcatatcgccagtacaggatgccttcagaaaaatttatcatggttg
tgctcccaccctccacagtactagataagcctggtggttttttttattgt
cttattatggtgctcaggctatggaaataattccagcacctaaagttgtt
tccctcttattccccattctccccaacagccgtgcgctgtgctgctggga
tgcaactcagggctttgctcgccttaggcaagcacttagcgagggcttac
gcctcctaaccagcatcgataatggtttcaggtgacagagaagtccccag
tcccaatctctgcactcctcacagcagccagtcacactgatgcttcttcc
tcttgcatgtccccaaattaacaccagaagctcaggccaccatgtctgcc
ctgagggaccgcagtggtgtctttggcctctctgactctacccctcttac
cccttttccatacctcatccagaggactctccggatcatagtgggctact
ccactgcctcgagttctccaagggtgggtaggctctgatggctgagctgg
ctgtggagtgagtttattccttcaccatccctttcttaagctgcagttgg
gttctctgaatgcccatcacgttttgtgccttttttcattgttaaattat
gcaaccaacttcctcagtgtggaatgtagtttctctcagtttaggttgct
ctatggggcaagttggggttggcaagatggtttctttttgactaagttaa
tagttgggatcaaaatcacattggagacattccggcagttcacttagccc
tttacctgctttggggacgtttctgggggcatgaagttcacattggttgc
caaaaagcaatgcctttgtcacagtaccactcagttcactagagttggtc
tgcttcaggcagttgggcccaagagaattggcagcacaggacttctgtgg
tcctcttggcagtacttgtactgcttgtgtgtacggtgccctacacgcat
gtggcctgcgtgcacggattgtgaggctttgctatgcgtgtcaatttgca
atatgactaacagcatcaggtaacttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_18653948_18655051
seq2: B6Ng01-130G12.b_48_1146

seq1  GAATTCTAAGCACACGCATACGCCTCTGCCTAAGGAATGTCGGGTAGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGCACACGCATACGCCTCTGCCTAAGGAATGTCGGGTAGCCT  50

seq1  CAATTAGATTACAGGATCAATTTCATTTCTCCTGATACTACCCATTCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAGATTACAGGATCAATTTCATTTCTCCTGATACTACCCATTCAGT  100

seq1  CAGCCCCTGAGGTTCCTAAAATGCTTCCCCATGTTAATAAGGCATTCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCCTGAGGTTCCTAAAATGCTTCCCCATGTTAATAAGGCATTCCAG  150

seq1  GTACCCAAAGGCCCCAGTCAGTGACCTTTGCTCATCCTGGATGTTCCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCAAAGGCCCCAGTCAGTGACCTTTGCTCATCCTGGATGTTCCTAC  200

seq1  CCTCAGTCCCCCAAATCATTATAAGCTTTGGATCATCCTAAGTAAAATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGTCCCCCAAATCATTATAAGCTTTGGATCATCCTAAGTAAAATTG  250

seq1  ATCTGCCCACTGACAGCTGGTCCCGGTGTGGAGTGTGGTTCATCACCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCCCACTGACAGCTGGTCCCGGTGTGGAGTGTGGTTCATCACCATA  300

seq1  TACATATTCACAGGGTTTCTGACCCCTCCCCCTACCCTACATGTAGTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATTCACAGGGTTTCTGACCCCTCCCCCTACCCTACATGTAGTCTC  350

seq1  TGCTTCCAGGATAGAAACTTACCTTCCACTTTGTTGGGCAGGGGGTAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCAGGATAGAAACTTACCTTCCACTTTGTTGGGCAGGGGGTAACC  400

seq1  AAGGGAACCTATTAACTATTCAAAGGTTTCCTTGTGGCTAATAAATTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAACCTATTAACTATTCAAAGGTTTCCTTGTGGCTAATAAATTTTT  450

seq1  ACTCATAACTGACCATAGTTAACTTGGAGCTTGAAATTAGAGCACTTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATAACTGACCATAGTTAACTTGGAGCTTGAAATTAGAGCACTTCAG  500

seq1  AAAGCCTTTTTATTCAAATGCATGATTATCACAGTCATAGTGAAAGACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCTTTTTATTCAAATGCATGATTATCACAGTCATAGTGAAAGACCT  550

seq1  GTTGAGCTAGTCTTGTCGTGGCTGTTCCCAGCCTTTATGGAAACCATCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGCTAGTCTTGTCGTGGCTGTTCCCAGCCTTTATGGAAACCATCTT  600

seq1  CCCAGGCATTTAAGGTAGCTGTGATAGGACACATGGGAGAACACCCCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGCATTTAAGGTAGCTGTGATAGGACACATGGGAGAACACCCCAGC  650

seq1  CATTAGGCAGGTGGCTTTATTGAGAGTGAGGTGACACAGTGGACACACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGGCAGGTGGCTTTATTGAGAGTGAGGTGACACAGTGGACACACTG  700

seq1  ATAATGAGTGTCCAGAGGCCAGGAAGGGCTAGACCTCCCATTTCGTGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGAGTGTCCAGAGGCCAGGAAGGGCTAGACCTCCCATTTCGTGAGA  750

seq1  CAGAAAAGCTACAGGAGCCTAGGAGAACTAAAACTTGGGCCAGCCCAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAGCTACAGGAGCCTAGGAGAACTAAAACTTGGGCCAGCCCAACA  800

seq1  AAGAGGATGAGAAAGTAGAGAGCTCGGCACTCTGATGTACTCTGTGCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGATGAGAAAGTAGAGAGCTCGGCACTCTGATGTACTCTGTGCTCT  850

seq1  TAGCCTGTTCCTGGGAGTTTGACACTCTGATGTACTCCTCTTAACCTGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTGTTCCTGGGAGTTTGACACTCTGATGTACTCCTCTTAACCTGTC  900

seq1  GCTGCAGGTTGGGAGAGAGATGGAAGACGGAGCATAGTCTGAGAATCAGA  950
      |||||| ||||||||||||||||||||| |||||||||||||| ||||||
seq2  GCTGCA-GTTGGGAGAGAGATGGAAGAC-GAGCATAGTCTGAG-ATCAGA  947

seq1  CTCCTAAGAACTACACGCACAGCTTATCCCTATAAAACTGTATCTTTTTC  1000
      ||||||||||||||||||||||| ||||||||||||||| ||||||||||
seq2  CTCCTAAGAACTACACGCACAGC-TATCCCTATAAAACTTTATCTTTTTC  996

seq1  AGATACCGTGCTTAATCAATGAAAGAAGGCCCATGACTGCTCTTAGGTAT  1050
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGATACCGTGCTTAATCAATGAAAGAA-GCCCATGACTGCTCTTAGGTAT  1045

seq1  GGCAGG-AGAGAGGGTTTATTGTAGATGT-GAGGGAGAGTATAGCCAGAC  1098
      |||||| ||| |||| ||||||||||||| |||||||| ||||||| |||
seq2  GGCAGGAAGAAAGGG-TTATTGTAGATGTGGAGGGAGA-TATAGCCCGAC  1093

seq1  ATATCT  1104
      ||||||
seq2  ATATCT  1099

seq1: chr8_18749701_18750782
seq2: B6Ng01-130G12.g_67_1144 (reverse)

seq1  GTAAGTAACCTGGATGCTGTTAGTCATATTGCAAAATGGCACAGCATAGA  50
      |||||| |||| ||||||||||||||||||||||| || ||| |||||| 
seq2  GTAAGTTACCT-GATGCTGTTAGTCATATTGCAAATTGACAC-GCATAG-  47

seq1  CAAAGCCTTCAC-ATCCGTGCACGCAGG-CACATGCGTGTAGTGCACACG  98
      ||||||| |||| ||||||||||||||| ||||||||||||| |  ||| 
seq2  CAAAGCC-TCACAATCCGTGCACGCAGGCCACATGCGTGTAGGG--CACC  94

seq1  GTACACAC-AGCAGTACAGTTACTGCCCAGAGGA-CACAGAAGT-CTGTG  145
      |||||||| |||||||||  ||||||| |||||| ||||||||| |||||
seq2  GTACACACAAGCAGTACAAGTACTGCCAAGAGGACCACAGAAGTCCTGTG  144

seq1  CTGCCAATCCTCTGGGGCCCAACTGCCTGAAGCAAGACCCCACTCTAGTG  195
      |||||||| |||| ||||||||||||||||||| ||| || |||||||||
seq2  CTGCCAATTCTCTTGGGCCCAACTGCCTGAAGC-AGA-CCAACTCTAGTG  192

seq1  AACCTGAGTGGTACTGTGACAAAGGCATTGCTTTGTGGC-ACCAATGGTG  244
      || ||||||||||||||||||||||||||||||| |||| |||||| |||
seq2  AA-CTGAGTGGTACTGTGACAAAGGCATTGCTTTTTGGCAACCAAT-GTG  240

seq1  AACTTCATGCCCCCAGAAACGTCCCCAAAGCAGGTAAA-GGCTAAGTGAA  293
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AACTTCATGCCCCCAGAAACGTCCCCAAAGCAGGTAAAGGGCTAAGTGAA  290

seq1  CTGCCGGAATGTCTCCAATGTTGATTTTGATCCCAACTATTAACTTAGTC  343
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTGCCGGAATGTCTCCAATG-TGATTTTGATCCCAACTATTAACTTAGTC  339

seq1  AAAAAGAAACCATCTTGCCAACCCCAACTTGCCCCATAGAGCAACCTAAA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAACCATCTTGCCAACCCCAACTTGCCCCATAGAGCAACCTAAA  389

seq1  CTGAGAGAAACTACATTCCACACTGAGGAAGTTGGTTGCATAATTTAACA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGAAACTACATTCCACACTGAGGAAGTTGGTTGCATAATTTAACA  439

seq1  ATGAAAAAAGGCACAAAACGTGATGGGCATTCAGAGAACCCAACTGCAGC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAAAGGCACAAAACGTGATGGGCATTCAGAGAACCCAACTGCAGC  489

seq1  TTAAGAAAGGGATGGTGAAGGAATAAACTCACTCCACAGCCAGCTCAGCC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAAGGGATGGTGAAGGAATAAACTCACTCCACAGCCAGCTCAGCC  539

seq1  ATCAGAGCCTACCCACCCTTGGAGAACTCGAGGCAGTGGAGTAGCCCACT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGCCTACCCACCCTTGGAGAACTCGAGGCAGTGGAGTAGCCCACT  589

seq1  ATGATCCGGAGAGTCCTCTGGATGAGGTATGGAAAAGGGGTAAGAGGGGT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCCGGAGAGTCCTCTGGATGAGGTATGGAAAAGGGGTAAGAGGGGT  639

seq1  AGAGTCAGAGAGGCCAAAGACACCACTGCGGTCCCTCAGGGCAGACATGG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCAGAGAGGCCAAAGACACCACTGCGGTCCCTCAGGGCAGACATGG  689

seq1  TGGCCTGAGCTTCTGGTGTTAATTTGGGGACATGCAAGAGGAAGAAGCAT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTGAGCTTCTGGTGTTAATTTGGGGACATGCAAGAGGAAGAAGCAT  739

seq1  CAGTGTGACTGGCTGCTGTGAGGAGTGCAGAGATTGGGACTGGGGACTTC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGACTGGCTGCTGTGAGGAGTGCAGAGATTGGGACTGGGGACTTC  789

seq1  TCTGTCACCTGAAACCATTATCGATGCTGGTTAGGAGGCGTAAGCCCTCG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCACCTGAAACCATTATCGATGCTGGTTAGGAGGCGTAAGCCCTCG  839

seq1  CTAAGTGCTTGCCTAAGGCGAGCAAAGCCCTGAGTTGCATCCCAGCAGCA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTGCTTGCCTAAGGCGAGCAAAGCCCTGAGTTGCATCCCAGCAGCA  889

seq1  CAGCGCACGGCTGTTGGGGAGAATGGGGAATAAGAGGGAAACAACTTTAG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGCACGGCTGTTGGGGAGAATGGGGAATAAGAGGGAAACAACTTTAG  939

seq1  GTGCTGGAATTATTTCCATAGCCTGAGCACCATAATAAGACAATAAAAAA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGAATTATTTCCATAGCCTGAGCACCATAATAAGACAATAAAAAA  989

seq1  AACCACCAGGCTTATCTAGTACTGTGGAGGGTGGGAGCACAACCATGATA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACCAGGCTTATCTAGTACTGTGGAGGGTGGGAGCACAACCATGATA  1039

seq1  AATTTTTCTGAAGGCATCCTGTACTGGCGATATGAATTC  1082
      |||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTCTGAAGGCATCCTGTACTGGCGATATGAATTC  1078