BAC Information

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BAC

Clone NameB6Ng01-130H11
Chromosome8 (Build37)14 (Build37)
Map Location 51,862,103 - 51,862,17367,403,891 - 67,404,912
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100039919, EG667495, LOC100039954, LOC100039966
Downstream geneLOC667517
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130H11.bB6Ng01-130H11.g
ACCDH931771DH931772
length7031,002
definitionDH931771|Mus musculus domesticus DNA, BAC clone: B6Ng01-130H11, 5' end.DH931772|Mus musculus domesticus DNA, BAC clone: B6Ng01-130H11, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(51,862,103 - 51,862,173)(67,403,891 - 67,404,912)
sequence
gaattcatgaaattcttaggcaaatggatggacctggagggcatcatcct
gagtgagctaacccaatcacaaaagaacacacatgatatgcactcactga
taagtggatattagcccagaaacttagaatatccaagatacaatttgcaa
atcacatgaaactcaagaagaaggaagactgaagtgtggatacttcattc
cttctttgaatggggaacaaaatacccatggaaggagttacagagaccaa
gttaggagctgagggggaaggagagaccatccagagacttccccacctgg
agatccatgccataaacaaccaccaaacccagacactattgcatatgcca
gaaagattttgctgacaggacccttatatagctatctcttgtgaggctat
gtcagtgcctggcaaatacagaagtggatgctcacagtcaactattggat
ggaacacagggcccccaatgaaggagctagagaaagtacccaaggagcta
aaggggtctgcaaccctataagaggaacaacaatatgaactaaccagtac
ccccagatctcctgtctctagttgcatatgtagcagaggatggcctagta
ggccatcaatgggaggagaggcccttggtcttgcaaagattatatgcccc
attacaggggaatgtcagggccaggaagcaggagtgggtgggttggggag
tgg
gaattcttcaggcatgaaatgctgagagagtgtattgatagcactctcag
cctgcagaactgtcaaagcaaatcccttagctggggagagaatgacatca
gatagaaatatgaacgcagagtgaaggagatagttgggagggcacctcaa
aataaaagactaagtggtgcgttccaaaggctcacactaggccagattca
ggggtgcatggggtaggccaagcagaactaactgcgttgctttagatcag
tggttcctgaccttcctaaagctgcgaccctttaatacagctcctcatgt
tgtagggacccctccccccaaccataaaagtatcttcactgctacttcat
aactgtaattttgctactgttataaatcataatgtaaatagtttcggaga
cagaggttcgccaaaagggttgtgacccacagattgagaactgctggttc
agatgttagtttcttccttgatcaggtaaggtacggcgtcactgtgggtg
tgcatcactgtgggtgtgcatcactgtgggtgtgccggtcagcctgggat
ccacatggtggaatgagaggaccagctacagaaacttgttccttgacctc
cacatacgcggtggcacacaccccttcctacatacataaataaaaatgca
atgaaaatccacaggaaattattttatcatatctctggggagtcccggtc
cgaaacggaggcctggctgggtgggattcttttgtgtctccctaactgtg
caaagcgtgtctccctatgtctccttctgtctatgcctgtttgcttcatc
gtcaaaggacactagaaattattaattagggcccatctcaaagaatcctc
attttagcgtaaaagcagtcacagttcagaggggctgggagtgggtcttc
aaaagacactaatgtcagcttaaagctattgggcgctgggctgctctgca
tctggcagaaaggttatgcctgcatgaagctcaaaatgagttaaggacat
tt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_51862103_51862173
seq2: B6Ng01-130H11.b_716_750 (reverse)

seq1  CCACTCCAAAACCTCCCTATCCCCTCCCAGCTTCCCCTGCTCACCAACCC  50
                                          |  ||| |||||||
seq2  ------------------------------------CCACTCCCCAACCC  14

seq1  ACCCACTCCTGCTTCCTGGCC  71
      |||||||||||||||||||||
seq2  ACCCACTCCTGCTTCCTGGCC  35

seq1: chr14_67403891_67404912
seq2: B6Ng01-130H11.g_68_1069 (reverse)

seq1  AAATGCTCCTCTAACTCATTCTCTGAAGCTTCAATGCAGGCATCAGCGCC  50
      ||||| |||| |||||||||   |  |||||| |||||||||| |    |
seq2  AAATG-TCCT-TAACTCATT---TTGAGCTTC-ATGCAGGCATAA----C  40

seq1  CTCTGCTGGCCAGGATGCAGAGCACGCCACAGACCGCCCAAATAGCTTTA  100
      || | || |||| ||||||||||| ||| |||  ||||| ||||||||||
seq2  CT-TTCT-GCCA-GATGCAGAGCA-GCC-CAG--CGCCC-AATAGCTTTA  82

seq1  AGCTGACACCCTTAAGTGTCTTTTGAAGACCCAACTCCCAGCCCCTCTG-  149
      ||||||||    | |||||||||||||||||| |||||||||||||||| 
seq2  AGCTGACA----TTAGTGTCTTTTGAAGACCC-ACTCCCAGCCCCTCTGA  127

seq1  ACTGTGACTGC-TTTACGCTAAAATGAG--ATCTTTGAGATGGGCCCTAA  196
      ||||||||||| ||||||||||||||||   |||||||||||||||||||
seq2  ACTGTGACTGCTTTTACGCTAAAATGAGGATTCTTTGAGATGGGCCCTAA  177

seq1  TTTAATATGTCTAGTGTCCTTTGACGATGAAGCAAACAGGCATAGACAGA  246
      || |  || |||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAATTTCTAGTGTCCTTTGACGATGAAGCAAACAGGCATAGACAGA  227

seq1  AGGAAGACATAGGGAGACACGCCTTGCACAGTTAGGGAGACACAAAAGAA  296
      ||| |||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGG-AGACATAGGGAGACACGCTTTGCACAGTTAGGGAGACACAAAAGAA  276

seq1  TCCCACCCAGCCAGGGCCTCCGTTTCGGACC-GGACTCCCCAGAGATATG  345
      ||||||||||||| ||||||||||||||||| ||||||||||||||||||
seq2  TCCCACCCAGCCA-GGCCTCCGTTTCGGACCGGGACTCCCCAGAGATATG  325

seq1  ATAAAATAATTTCCTGTGGATTTTCATTGCATTTTTATTTATGTATGTAG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAATTTCCTGTGGATTTTCATTGCATTTTTATTTATGTATGTAG  375

seq1  GAAGGGGTGTGTGCCACCGCGTATGTGGAGGTCAAGGAACAAGTTTCTGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGGTGTGTGCCACCGCGTATGTGGAGGTCAAGGAACAAGTTTCTGT  425

seq1  AGCTGGTCCTCTCATTCCACCATGTGGATCCCAGGCTGACCGGCACACCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGTCCTCTCATTCCACCATGTGGATCCCAGGCTGACCGGCACACCC  475

seq1  ACAGTGATGCACACCCACAGTGATGCACACCCACAGTGACGCCGTACCTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGATGCACACCCACAGTGATGCACACCCACAGTGACGCCGTACCTT  525

seq1  ACCTGATCAAGGAAGAAACTAACATCTGAACCAGCAGTTCTCAATCTGTG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGATCAAGGAAGAAACTAACATCTGAACCAGCAGTTCTCAATCTGTG  575

seq1  GGTCACAACCCTTTTGGCGAACCTCTGTCTCCGAAACTATTTACATTATG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACAACCCTTTTGGCGAACCTCTGTCTCCGAAACTATTTACATTATG  625

seq1  ATTTATAACAGTAGCAAAATTACAGTTATGAAGTAGCAGTGAAGATACTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAACAGTAGCAAAATTACAGTTATGAAGTAGCAGTGAAGATACTT  675

seq1  TTATGGTTGGGGGGAGGGGTCCCTACAACATGAGGAGCTGTATTAAAGGG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGTTGGGGGGAGGGGTCCCTACAACATGAGGAGCTGTATTAAAGGG  725

seq1  TCGCAGCTTTAGGAAGGTCAGGAACCACTGATCTAAAGCAACGCAGTTAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCAGCTTTAGGAAGGTCAGGAACCACTGATCTAAAGCAACGCAGTTAG  775

seq1  TTCTGCTTGGCCTACCCCATGCACCCCTGAATCTGGCCTAGTGTGAGCCT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTTGGCCTACCCCATGCACCCCTGAATCTGGCCTAGTGTGAGCCT  825

seq1  TTGGAACGCACCACTTAGTCTTTTATTTTGAGGTGCCCTCCCAACTATCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAACGCACCACTTAGTCTTTTATTTTGAGGTGCCCTCCCAACTATCT  875

seq1  CCTTCACTCTGCGTTCATATTTCTATCTGATGTCATTCTCTCCCCAGCTA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACTCTGCGTTCATATTTCTATCTGATGTCATTCTCTCCCCAGCTA  925

seq1  AGGGATTTGCTTTGACAGTTCTGCAGGCTGAGAGTGCTATCAATACACTC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATTTGCTTTGACAGTTCTGCAGGCTGAGAGTGCTATCAATACACTC  975

seq1  TCTCAGCATTTCATGCCTGAAGAATTC  1022
      |||||||||||||||||||||||||||
seq2  TCTCAGCATTTCATGCCTGAAGAATTC  1002