BAC Information

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BAC

Clone NameB6Ng01-130K07
Chromosome8 (Build37)
Map Location 53,206,602 - 53,350,242
singlet/doubletdoublet
Overlap geneLOC100040220
Upstream geneLOC667517, LOC623872
Downstream geneLOC623935, 1190028D05Rik, LOC676688
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130K07.bB6Ng01-130K07.g
ACCDH931906DH931907
length1,137913
definitionDH931906|Mus musculus domesticus DNA, BAC clone: B6Ng01-130K07, 5' end.DH931907|Mus musculus domesticus DNA, BAC clone: B6Ng01-130K07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(53,206,602 - 53,207,751)(53,349,636 - 53,350,242)
sequence
gaattcactttctgcctttaagggatcatggctatagtaatattttcaat
aattctattgaagatatagttcatatgagagaggccaagagacttactcc
ttaggttttatctgtcattagtgatttgttttttcccaaactcataagag
gttgcaaaatacatgtagacttattaaagaaaggactgactgcctggaga
acaaactcaaactaggtcattcaagaagtctctctgtaataaaggtagtg
gcagtagccttaaaaatacaagactgatgttttctgtcattctgttaact
ttccattattactgatgtttgggtagacatgtaactgtcttgtgctacaa
atataaattttacaacaagctatgaaaaatctgtcaggaacaatctggcc
atattttgataactgttgctatcacatgggcaatgaaaggtatttggtca
agatcacatagcatggcatgacatttagaacagaaaaatacacaaatggt
aagatgtttctccattttttttaacaaaaatctctctacagtgaatgaca
gataagcacaactgaaacaaactgaacctgtatcttccaaataactaaat
agaggctatagcatagatttgttacagaaacactaggatcctccagttta
gcttcatttaacagttgcttgtgctaacataatagacaacatgcatgaaa
gtaaatggtataacctaaaaactgtttgccttctcataaaagtattgtaa
aggtattagagtgagtttttcctaattattatagtttatggtatcataga
taattagattaaaccagttttaataaacacttaaaatattttaatacctt
aatatttcatatattaaaaacagggttaatatgtatatattaaagctctt
tgtcaatataacttgctattgatatatcagtaagtatgcatataaatata
gtatctatttatcaattcttaatttgttttagggaagaactctgagccta
taaattttctatgagactgaaaggcataaaagtcttaatatcatatcctc
aaacgtggattaccaaatgtaaatgagtcagcaattattgtcaaaattaa
ctcatttccaatcatcaccttactgttttctttcatt
gaattccttatacctccacgggacaaggaatagttgaacgtgctcattgt
acttttaaaaattgactatataatctcgttctttatatattcaaaatata
taagctgtatgcttaaaacctggcgtttcagcctaataaactgagacctt
gataggatgcccttcttggtctccgccccttctttctctccctctcattt
tctcccaggttttcagtcccccctcacactgacgaataactgagtcctgc
tggtcgggacactcgaaatagctctcaagcactgccctggctatttcaca
caatgatgcagctagtagaggttgggggaaggctaatctctccattttca
tgacataggagtgtcagagagagctcttccaggttcctgtcctcagcatg
ctcactctcactcaagcaaccagggtcaattctactgtgctgtccaggca
atatgtaagacccactctcccaaatgctgcagctaacaaggagcatgaac
agctctctctttctttctcataacttggggttatctatccagctctctga
attctttgagggaaaaggcatgaggatgtcatctcttcttttcccatgct
gccaccagcatatgatagaacaatggtagagccaactctcctgtgttcac
gtccccagggctatcttacaagctcagtgcagggactgctttcctgagtg
ctgaagcaagtgagaggtagggacaaatctacacaggtcttggacatcaa
caaggtcctaggtggcagcctatatatactatgtatgtcttcatagcctt
tggtggtaatatgaatcacagatattaaaatagagccatactgccagatg
accatgaacccacacatggcccttagggacagtgcagacagaagttcaca
tggctcagtagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_53206602_53207751
seq2: B6Ng01-130K07.b_43_1179

seq1  GAATTCACTTTCTGCCTTTAAGGGATCATGGCTATAGTAATATTTTCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTCTGCCTTTAAGGGATCATGGCTATAGTAATATTTTCAAT  50

seq1  AATTCTATTGAAGATATAGTTCATATGAGAGAGGCCAAGAGACTTACTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTATTGAAGATATAGTTCATATGAGAGAGGCCAAGAGACTTACTCC  100

seq1  TTAGGTTTTATCTGTCATTAGTGATTTGTTTTTTCCCAAACTCATAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTTTATCTGTCATTAGTGATTTGTTTTTTCCCAAACTCATAAGAG  150

seq1  GTTGCAAAATACATGTAGACTTATTAAAGAAAGGACTGACTGCCTGGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCAAAATACATGTAGACTTATTAAAGAAAGGACTGACTGCCTGGAGA  200

seq1  ACAAACTCAAACTAGGTCATTCAAGAAGTCTCTCTGTAATAAAGGTAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACTCAAACTAGGTCATTCAAGAAGTCTCTCTGTAATAAAGGTAGTG  250

seq1  GCAGTAGCCTTAAAAATACAAGACTGATGTTTTCTGTCATTCTGTTAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTAGCCTTAAAAATACAAGACTGATGTTTTCTGTCATTCTGTTAACT  300

seq1  TTCCATTATTACTGATGTTTGGGTAGACATGTAACTGTCTTGTGCTACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTATTACTGATGTTTGGGTAGACATGTAACTGTCTTGTGCTACAA  350

seq1  ATATAAATTTTACAACAAGCTATGAAAAATCTGTCAGGAACAATCTGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAATTTTACAACAAGCTATGAAAAATCTGTCAGGAACAATCTGGCC  400

seq1  ATATTTTGATAACTGTTGCTATCACATGGGCAATGAAAGGTATTTGGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTGATAACTGTTGCTATCACATGGGCAATGAAAGGTATTTGGTCA  450

seq1  AGATCACATAGCATGGCATGACATTTAGAACAGAAAAATACACAAATGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCACATAGCATGGCATGACATTTAGAACAGAAAAATACACAAATGGT  500

seq1  AAGATGTTTCTCCATTTTTTTTAACAAAAATCTCTCTACAGTGAATGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTTTCTCCATTTTTTTTAACAAAAATCTCTCTACAGTGAATGACA  550

seq1  GATAAGCACAACTGAAACAAACTGAACCTGTATCTTCCAAATAACTAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGCACAACTGAAACAAACTGAACCTGTATCTTCCAAATAACTAAAT  600

seq1  AGAGGCTATAGCATAGATTTGTTACAGAAACACTAGGATCCTCCAGTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCTATAGCATAGATTTGTTACAGAAACACTAGGATCCTCCAGTTTA  650

seq1  GCTTCATTTAACAGTTGCTTGTGCTAACATAATAGACAACATGCATGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCATTTAACAGTTGCTTGTGCTAACATAATAGACAACATGCATGAAA  700

seq1  GTAAATGGTATAACCTAAAAACTGTTTGCCTTCTCATAAAAGTATTGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGGTATAACCTAAAAACTGTTTGCCTTCTCATAAAAGTATTGTAA  750

seq1  AGGTATTAGAGTGAGTTTTTCCTAATTATTATAGTTTATGGTATCATAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATTAGAGTGAGTTTTTCCTAATTATTATAGTTTATGGTATCATAGA  800

seq1  TAATTAGATTAAACCAGTTTTAATAAACACTTAAAATATTTTAATACCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAGATTAAACCAGTTTTAATAAACACTTAAAATATTTTAATACCTT  850

seq1  AATATTTCATATATTAAAAACAGGGTTAATATGTATATATTAAAGCTCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTCATATATTAAAAACAGGGTTAATATGTATATATTAAAGCTCTT  900

seq1  TGTCAAATATAACTTGCTATTGATATATCAGTAAGTATGCATATAAATAT  950
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTC-AATATAACTTGCTATTGATATATCAGTAAGTATGCATATAAATAT  949

seq1  AGTATCTATTTATCAATTCTTAATTTGTTTTTAGGGGAAGTAACTCTGAG  1000
      |||||||||||||||||||||||||||||||   |||||| |||||||||
seq2  AGTATCTATTTATCAATTCTTAATTTGTTTT--AGGGAAG-AACTCTGAG  996

seq1  CCTTATAATTTTCCTATGAGACTGAAAGGCATTAAAAGTCATAATATCAT  1050
      || ||||| ||| |||||||||||||||||| |||||||| |||||||||
seq2  CC-TATAAATTTTCTATGAGACTGAAAGGCA-TAAAAGTCTTAATATCAT  1044

seq1  ATCCTCAAAACAGTGAATTAACAAATGTAAATGAGTCAGCAAATATATGT  1100
      |||||||||   ||| |||| ||||||||||||||||||||| ||| |||
seq2  ATCCTCAAA--CGTGGATTACCAAATGTAAATGAGTCAGCAATTAT-TGT  1091

seq1  CAAAAATTAAACTCATTTCACAATCATCAACTTTACTGTTTTCTTTCATT  1150
      |||||  | |||||||||| |||||||| || ||||||||||||||||||
seq2  CAAAA--TTAACTCATTTC-CAATCATC-ACCTTACTGTTTTCTTTCATT  1137

seq1: chr8_53349636_53350242
seq2: B6Ng01-130K07.g_69_675 (reverse)

seq1  TGGTGGCAGCATGGGAAAAGAAGAGATGACATCCTCATGCCTTTTCCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCAGCATGGGAAAAGAAGAGATGACATCCTCATGCCTTTTCCCTC  50

seq1  AAAGAATTCAGAGAGCTGGATAGATAACCCCAAGTTATGAGAAAGAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATTCAGAGAGCTGGATAGATAACCCCAAGTTATGAGAAAGAAAGA  100

seq1  GAGAGCTGTTCATGCTCCTTGTTAGCTGCAGCATTTGGGAGAGTGGGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCTGTTCATGCTCCTTGTTAGCTGCAGCATTTGGGAGAGTGGGTCT  150

seq1  TACATATTGCCTGGACAGCACAGTAGAATTGACCCTGGTTGCTTGAGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATTGCCTGGACAGCACAGTAGAATTGACCCTGGTTGCTTGAGTGA  200

seq1  GAGTGAGCATGCTGAGGACAGGAACCTGGAAGAGCTCTCTCTGACACTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGCATGCTGAGGACAGGAACCTGGAAGAGCTCTCTCTGACACTCC  250

seq1  TATGTCATGAAAATGGAGAGATTAGCCTTCCCCCAACCTCTACTAGCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCATGAAAATGGAGAGATTAGCCTTCCCCCAACCTCTACTAGCTGC  300

seq1  ATCATTGTGTGAAATAGCCAGGGCAGTGCTTGAGAGCTATTTCGAGTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTGTGTGAAATAGCCAGGGCAGTGCTTGAGAGCTATTTCGAGTGTC  350

seq1  CCGACCAGCAGGACTCAGTTATTCGTCAGTGTGAGGGGGGACTGAAAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACCAGCAGGACTCAGTTATTCGTCAGTGTGAGGGGGGACTGAAAACC  400

seq1  TGGGAGAAAATGAGAGGGAGAGAAAGAAGGGGCGGAGACCAAGAAGGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGAAAATGAGAGGGAGAGAAAGAAGGGGCGGAGACCAAGAAGGGCA  450

seq1  TCCTATCAAGGTCTCAGTTTATTAGGCTGAAACGCCAGGTTTTAAGCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATCAAGGTCTCAGTTTATTAGGCTGAAACGCCAGGTTTTAAGCATA  500

seq1  CAGCTTATATATTTTGAATATATAAAGAACGAGATTATATAGTCAATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTATATATTTTGAATATATAAAGAACGAGATTATATAGTCAATTTT  550

seq1  TAAAAGTACAATGAGCACGTTCAACTATTCCTTGTCCCGTGGAGGTATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTACAATGAGCACGTTCAACTATTCCTTGTCCCGTGGAGGTATAA  600

seq1  GGAATTC  607
      |||||||
seq2  GGAATTC  607