BAC Information

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BAC

Clone NameB6Ng01-131D17
Chromosome8 (Build37)
Map Location 42,938,421 - 43,042,948
singlet/doubletdoublet
Overlap geneLOC671994
Upstream geneLOC384808, EG667077, Slc7a2, Pdgfrl, Mtus1, Fgl1, Pcm1, Asah1, Frg1, LOC100039376, Gm1815
Downstream geneZfp353, EG620772, LOC628212
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131D17.bB6Ng01-131D17.g
ACCDH932341DH932342
length1,127925
definitionDH932341|Mus musculus domesticus DNA, BAC clone: B6Ng01-131D17, 5' end.DH932342|Mus musculus domesticus DNA, BAC clone: B6Ng01-131D17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,041,802 - 43,042,948)(42,938,421 - 42,939,343)
sequence
gaattcttttatattaaaatgctgttctttgatgttatgaatgatagtaa
ttttaaaaattacagggcagtcaaccttcctcaaaattctaggtatatta
tatgactcaatgtgtttatagccttgttaattaggctgtttagtaatcag
acaaaaacatttataatccttaaaatataatttcacgaaaattaggtata
tgttaaagtcaaggtggaaaactatgtgcaaggcttcctctgaaacaaga
gtcatttctgtaaaacatattttagcagacatgcattatgaatttataaa
tttagagatatgaaaggatgtgctcctttgttttttaatgtggaagactt
taaaaacactgtattttatcttgttatttccacaaaagcacttagcaacc
tttcatattttcaacatcactttttgacaagacaaagagaagaggcaatc
tgtgggtggcatgctgaaataataacctggggagtgccataagaaagaac
atgtcagctgctggaatcctcactgactatagatagctccctgagtcagg
atgaatgcaagcatgattacctatgatacagagtgctttgacttttgaaa
tccaaatgaagtcattaattctagagggtacatctcagaagtactgaagt
cacctttttcaaggtagaaagaggaaaacgctaagccatcaactcacata
gactttttctctctgcttgtcacattcaactgctattcttccccttttaa
gcagttgccagaaagacaaaaaaaaaaaaaaaaaaaaacaactctcactg
gccatgatagctgctcaggtacctgagccttgtttgttcagcccctactt
ctagagacatggcctttgtacatcatcctcacccatgctgggataggctt
atccataatctaactacctatgaagcagccatgattctgtaatattcatg
atcaacctattggtcacaacaaatgtggctaggttagtttagctatgttg
tcatgctctctatctctaaagacagtgatggcataagctttacttcgtag
tactgtggctatactggcagtggcatgattattatgttgcatcttgcaga
tctggtttgaaagggggtgtttttcag
gaattctatcccaggtggttccagtcagaccttctgtgtttgtattcctc
tgttttgtgtaagaatcaagtaacctctttgtaccttgctggtgtgtcac
ccaacttccctattttcttctgtataaaaagtttgatgctggatttgaca
aattgcattcagattctacacaacctctcctgtgtgcatctgtctgtcat
ttcatccaacactttgcccacctgcgactagagacctgttccactcagac
aaaggggcccagagggtctgctgtagatatatgcttataaagtaaacata
aaggatttcaaaaacatattttcatctggcaatgaccaggctgtcacatg
aaaaaggcactcacacgtaaaaacattctgtaaaacaaccataaactttt
ggcatgtcacagttcacaggggccattcaagactgtcaccagagctacac
tgcaactctgaaccattattaataaaattaaatgaaatttgagttgtcag
ctcacagatcagaagcaaaagaacaaacagcaacaacaaaatcaacagaa
aatatttaaaaaatcctcttcaagttatacaaataaaaccagaaaccaac
aagagaagaaaaactacattaaatcattccaataaaggtctgagttttaa
aagtgacaagataagcaaatcaatcaccaacaaattttttgtattggatt
atttttaagacagatagatagatagatagatagatagatagatagataga
tagatagatagatagattgcaagcaagtatgatgttggctcggttaggag
gtggggagtatctgagaggatttggggaggaaaccaaaaatcaaaatgta
tgaaaaaaaaaaaggagagtagcacataaattttaaggaaggagttaaga
agcaataagtattattaagaagaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_43041802_43042948
seq2: B6Ng01-131D17.b_47_1173 (reverse)

seq1  CTGAAAAGACACACCCCCTCAAAACAGAAACTGCAAAGGAATGCAAACAT  50
      ||||||| |||| |||  ||||| ||| | ||||||    |||| |||||
seq2  CTGAAAA-ACACCCCCTTTCAAACCAG-ATCTGCAA---GATGC-AACAT  44

seq1  AAATAATCAATGCCACTGCCAAGTATAGCCACAGTTACTACGAAGTAAAG  100
       ||||||| ||||||||||| ||||||||||||| |||||||||||||||
seq2  -AATAATC-ATGCCACTGCC-AGTATAGCCACAG-TACTACGAAGTAAAG  90

seq1  CTTATTGCCATCACTTGTCTTTAGGAGATAGAGAGCAATGACAACATAGC  150
      |||| ||||||||| |||||||| |||||||||||| |||||||||||||
seq2  CTTA-TGCCATCAC-TGTCTTTA-GAGATAGAGAGC-ATGACAACATAGC  136

seq1  TAAACTAACCTAGCCACATTTGTTTGTTGGACCAATAGGTTGATCATGAA  200
      |||||||||||||||||||||| ||||  |||||||||||||||||||||
seq2  TAAACTAACCTAGCCACATTTG-TTGT--GACCAATAGGTTGATCATGAA  183

seq1  TATTACAGAATCATGGCTGCTTCATAGGTAGTTAGATTATGGATAAGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACAGAATCATGGCTGCTTCATAGGTAGTTAGATTATGGATAAGCCT  233

seq1  ATCCCAGCATGGGTGAGGATGATGTACAAAGGCCATGTCTCTAGAAGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAGCATGGGTGAGGATGATGTACAAAGGCCATGTCTCTAGAAGTAG  283

seq1  GGGCTGAACAAACAAGGCTCAGGTACCTGAGCAGCTATCATGGCCAGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGAACAAACAAGGCTCAGGTACCTGAGCAGCTATCATGGCCAGTGA  333

seq1  GAGTTGTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTCTGGCAACTGCTTA  400
      ||||||   ||||||||||||||||||||| |||||||||||||||||||
seq2  GAGTTG---TTTTTTTTTTTTTTTTTTTTTGTCTTTCTGGCAACTGCTTA  380

seq1  AAAGGGGAAGAATAGCAGTTGAATGTGACAAGCAGAGAGAAAAAGTCTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGGAAGAATAGCAGTTGAATGTGACAAGCAGAGAGAAAAAGTCTAT  430

seq1  GTGAGTTGATGGCTTAGCGTTTTCCTCTTTCTACCTTGAAAAAGGTGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTGATGGCTTAGCGTTTTCCTCTTTCTACCTTGAAAAAGGTGACT  480

seq1  TCAGTACTTCTGAGATGTACCCTCTAGAATTAATGACTTCATTTGGATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTACTTCTGAGATGTACCCTCTAGAATTAATGACTTCATTTGGATTT  530

seq1  CAAAAGTCAAAGCACTCTGTATCATAGGTAATCATGCTTGCATTCATCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTCAAAGCACTCTGTATCATAGGTAATCATGCTTGCATTCATCCT  580

seq1  GACTCAGGGAGCTATCTATAGTCAGTGAGGATTCCAGCAGCTGACATGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAGGGAGCTATCTATAGTCAGTGAGGATTCCAGCAGCTGACATGTT  630

seq1  CTTTCTTATGGCACTCCCCAGGTTATTATTTCAGCATGCCACCCACAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTATGGCACTCCCCAGGTTATTATTTCAGCATGCCACCCACAGAT  680

seq1  TGCCTCTTCTCTTTGTCTTGTCAAAAAGTGATGTTGAAAATATGAAAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTTCTCTTTGTCTTGTCAAAAAGTGATGTTGAAAATATGAAAGGT  730

seq1  TGCTAAGTGCTTTTGTGGAAATAACAAGATAAAATACAGTGTTTTTAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAGTGCTTTTGTGGAAATAACAAGATAAAATACAGTGTTTTTAAAG  780

seq1  TCTTCCACATTAAAAAACAAAGGAGCACATCCTTTCATATCTCTAAATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCACATTAAAAAACAAAGGAGCACATCCTTTCATATCTCTAAATTT  830

seq1  ATAAATTCATAATGCATGTCTGCTAAAATATGTTTTACAGAAATGACTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTCATAATGCATGTCTGCTAAAATATGTTTTACAGAAATGACTCT  880

seq1  TGTTTCAGAGGAAGCCTTGCACATAGTTTTCCACCTTGACTTTAACATAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAGAGGAAGCCTTGCACATAGTTTTCCACCTTGACTTTAACATAT  930

seq1  ACCTAATTTTCGTGAAATTATATTTTAAGGATTATAAATGTTTTTGTCTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAATTTTCGTGAAATTATATTTTAAGGATTATAAATGTTTTTGTCTG  980

seq1  ATTACTAAACAGCCTAATTAACAAGGCTATAAACACATTGAGTCATATAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTAAACAGCCTAATTAACAAGGCTATAAACACATTGAGTCATATAA  1030

seq1  TATACCTAGAATTTTGAGGAAGGTTGACTGCCCTGTAATTTTTAAAATTA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCTAGAATTTTGAGGAAGGTTGACTGCCCTGTAATTTTTAAAATTA  1080

seq1  CTATCATTCATAACATCAAAGAACAGCATTTTAATATAAAAGAATTC  1147
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCATTCATAACATCAAAGAACAGCATTTTAATATAAAAGAATTC  1127

seq1: chr8_42938421_42939343
seq2: B6Ng01-131D17.g_69_993

seq1  GAATTCTATCCCAGGTGGTTCCAGTCAGACCTTCTGTGTTTGTATTCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCCCAGGTGGTTCCAGTCAGACCTTCTGTGTTTGTATTCCTC  50

seq1  TGTTTTGTGTAAGAATCAAGTAACCTCTTTGTACCTTGCTGGTGTGTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTGTAAGAATCAAGTAACCTCTTTGTACCTTGCTGGTGTGTCAC  100

seq1  CCAACTTCCCTATTTTCTTCTGTATAAAAAGTTTGATGCTGGATTTGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTTCCCTATTTTCTTCTGTATAAAAAGTTTGATGCTGGATTTGACA  150

seq1  AATTGCATTCAGATTCTACACAACCTCTCCTGTGTGCATCTGTCTGTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCATTCAGATTCTACACAACCTCTCCTGTGTGCATCTGTCTGTCAT  200

seq1  TTCATCCAACACTTTGCCCACCTGCGACTAGAGACCTGTTCCACTCAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCCAACACTTTGCCCACCTGCGACTAGAGACCTGTTCCACTCAGAC  250

seq1  AAAGGGGCCCAGAGGGTCTGCTGTAGATATATGCTTATAAAGTAAACATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGGCCCAGAGGGTCTGCTGTAGATATATGCTTATAAAGTAAACATA  300

seq1  AAGGATTTCAAAAACATATTTTCATCTGGCAATGACCAGGCTGTCACATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTTCAAAAACATATTTTCATCTGGCAATGACCAGGCTGTCACATG  350

seq1  AAAAAGGCACTCACACGTAAAAACATTCTGTAAAACAACCATAAACTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGCACTCACACGTAAAAACATTCTGTAAAACAACCATAAACTTTT  400

seq1  GGCATGTCACAGTTCACAGGGGCCATTCAAGACTGTCACCAGAGCTACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGTCACAGTTCACAGGGGCCATTCAAGACTGTCACCAGAGCTACAC  450

seq1  TGCAACTCTGAACCATTATTAATAAAATTAAATGAAATTTGAGTTGTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACTCTGAACCATTATTAATAAAATTAAATGAAATTTGAGTTGTCAG  500

seq1  CTCACAGATCAGAAGCAAAAGAACAAACAGCAACAACAAAATCAACAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGATCAGAAGCAAAAGAACAAACAGCAACAACAAAATCAACAGAA  550

seq1  AATATTTAAAAAATCCTCTTCAAGTTATACAAATAAAACCAGAAACCAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTAAAAAATCCTCTTCAAGTTATACAAATAAAACCAGAAACCAAC  600

seq1  AAGAGAAGAAAAACTACATTAAATCATTCCAATAAAGGTCTGAGTTTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAGAAAAACTACATTAAATCATTCCAATAAAGGTCTGAGTTTTAA  650

seq1  AAGTGACAAGATAAGCAAATCAATCACCAACAAATTTTTTGTATTGGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGACAAGATAAGCAAATCAATCACCAACAAATTTTTTGTATTGGATT  700

seq1  ATTTTTAAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA  750

seq1  TAGATAGATAGATAGATTGCAAGCAAGTATGATGTTGGCTCGGTTAGGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGATAGATAGATTGCAAGCAAGTATGATGTTGGCTCGGTTAGGAG  800

seq1  GTGGGGAGTATCTGAGAGGATTT-GGGAGGAAA-CAAAAATCAAAATGTA  848
      ||||||||||||||||||||||| ||||||||| ||||||||||||||||
seq2  GTGGGGAGTATCTGAGAGGATTTGGGGAGGAAACCAAAAATCAAAATGTA  850

seq1  TGAAAAAAAAAAGGTAGAGTAGCACATAAATATT-AGGAAGGAGTTAAGA  897
      |||||||||||| | |||||||||||||||| || |||||||||||||||
seq2  TGAAAAAAAAAAAGGAGAGTAGCACATAAATTTTAAGGAAGGAGTTAAGA  900

seq1  AGTAAATAAGTATTAATAAGAAGAAA  923
      ||  ||||||||||| ||||||||||
seq2  AG-CAATAAGTATTATTAAGAAGAAA  925