BAC Information

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BAC

Clone NameB6Ng01-132F20
Chromosome8 (Build37)
Map Location 46,774,234 - 46,774,980
singlet/doubletsinglet
Overlap geneSorbs2
Upstream geneLOC100039508, Fat1, LOC100039673, Mtnr1a, EG622523, F11, Klkb1, Cyp4v3, BC035537, Tlr3
Downstream genePdlim3, Ccdc110, 1700029J07Rik, 1810047C23Rik, Ankrd37, Lrp2bp, Snx25, 4933411K20Rik, Slc25a4, LOC621269, LOC100039875, LOC667325, Helt, LOC667337, Acsl1, Mlf1ip, Ccdc111, Casp3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132F20.bB6Ng01-132F20.g
ACCDH933184DH933185
length1,223954
definitionDH933184|Mus musculus domesticus DNA, BAC clone: B6Ng01-132F20, 5' end.DH933185|Mus musculus domesticus DNA, BAC clone: B6Ng01-132F20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatactgaatggctgacaagcacctgaaaaaatg
ttcaacatctttaatcaagagggaaatgcaaatcacaacaaccctgagat
tccacctcacaccagtcagaatggctaatatcgaaaatttaagtggccgc
ggatgctgacaaggatgtggtgaaaaatgaacactcctcaattgcttgtg
ggattgccagcaggtacaataactctagaaatcagtttggcgggtcctca
aaaaattggacatttttctaccaaaacatctaccgatacctctcctgggc
atatacccccaacatattccaacttgtaataaggacacatgctccactat
gtttattgcatccttatttataatccccctaactggaaacaaccctcatg
tctctcaacccaagaatggataccgaacatgtggtacatttacataatgg
agtactactcagctattagcaacaatgaatttatgaaattctgaggcaaa
tggatggatctggagtatatcatcctgagtgaggtaacccaatcacaaaa
gaactcacatgatatgcactcactgataagtggatattagcccagaaact
tagaatacccaacatacaatttgcaaaacacatgaaactcaagaagaagg
aagaccaaagtgtggatatttcattcctccttagaatggggaacaaaata
cccatggaaggagttacagaaacacagtggagctgagacagaaggaagga
ccatccagagactgccccatccggggatccatcccataaacaaccaccaa
acccaggcactgttgcttatgccagtaagattttgctgacaggaccccaa
tatagcagtctcttgtgaggctatgtcagtgcctgacaaatacagaagtg
gatgctcacagtcatctattggatggaacataggacccccaatggagaaa
tttaattaattaattaaattaaattaattaattctatttgccaagattac
aaaattacctgtgatatgagagggtggacagtatgagtctgacggagaac
catcactctatgtacagattccaagcacaatgcatcatgtatattaacat
aatatttctatttgcccagttagactggtactagatatctggaaggaggg
aatacccaggctaggactgacgtagacattttgaagtcatatggactcag
ggagagttcaataactcacacga
gaattctcatgaaatgactagttttggattcatgcaagactctcaatggg
aatttctggcttcttacctaatgcttcttcctactttgcctcgctgagtc
cttttactagaaagcatgaaaggagaattaatttctgtctttgagcatag
caatacctgggctagggtcctgatgcaaggctcttctctgagctccgttt
tctaagtgtttagttgggagggttcaactgccagagtttcaacaacccaa
acttttaataagtgtgaacttacgaattagccgtcaagtttaagagaaag
tgcataaagccgcctagagccgacctgaatccatttctcccctggtgccc
tatcgattctgttttgaggtgaagcagggagcactagaaaacagggaacc
ctaagagtagcttaggtattttctgttttaccacctcaacttgctgattg
catttgcaaattctaaccgctgagaaaggagtcaggagtcttgaatgttg
gaaacaggggaaagtggaaagatgcttgaaagagcagcaatatttatacc
ttgaagtgtgctaaatattcatggggaaataaacctaacgcattctatct
cctaaagtttaacactccttccttttggatgatgaactaccctcaccaag
cccacagcagacagagagacctctacctcgccataggttagtacacgtta
ccccgttaatttgaagtacctgtagttctgttggtgtgtagagggggtga
tggaccatctagagactgccttatccagggatccaccccataatcagcat
ccaaacgctgacaccattgcatacactagcaagattttatcgaaaggacc
cagatgtagctgtctcttgtgagactatgccggggctagcaaacacagaa
gtggatgtccacagtcagctattggatggatcacaggctcccaatggagg
agct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_46774234_46774980
seq2: B6Ng01-132F20.g_66_811 (reverse)

seq1  CCCCTCCACACACCAACAGAACAACAGTAACTAAAAATTAACCTGCTAAC  50
      |||||| ||||||||||||||| ||||  |||  ||||||||  | ||||
seq2  CCCCTCTACACACCAACAGAACTACAGGTACTTCAAATTAACGGGGTAAC  50

seq1  TGGTAATAACCTATTGCAACTTAGAAGTCTTTTTGTCTGCAGTGGGCTTG  100
        ||| |||||||| || |  |||| |||| | ||||||| |||||||||
seq2  GTGTACTAACCTATGGCGAGGTAGAGGTCTCTCTGTCTGCTGTGGGCTTG  100

seq1  GTGAGGGTAGTTCATCATCCAAAAGGAAGGAGTGTTAAACTTTAGGAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGGTAGTTCATCATCCAAAAGGAAGGAGTGTTAAACTTTAGGAGAT  150

seq1  AGAATGCGTTAGGTTTATTTCCCCATGAATATTTAGCACACTTCAAGGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGCGTTAGGTTTATTTCCCCATGAATATTTAGCACACTTCAAGGTA  200

seq1  TAAATATTGCTGCTCTTTCAAGCATCTTTCCACTTTGCCCTGTTTCCAAC  250
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TAAATATTGCTGCTCTTTCAAGCATCTTTCCACTTTCCCCTGTTTCCAAC  250

seq1  ATTCAAGACTCCTGACTCCTTACTCAGCGGTTTGACTTTGCAAATGCAAT  300
      ||||||||||||||||||||| |||||||||| || ||||||||||||||
seq2  ATTCAAGACTCCTGACTCCTTTCTCAGCGGTTAGAATTTGCAAATGCAAT  300

seq1  TAGCAAACTGAGCTGGTAAAACAGAAAATACTTAAGCAACTCCTATGCTT  350
       |||||  |||| |||||||||||||||||| ||||| |||| || | ||
seq2  CAGCAAGTTGAGGTGGTAAAACAGAAAATACCTAAGCTACTCTTAGGGTT  350

seq1  CCCTGTTTTCTAGTGCTCCCTGCTTCACCTCAAAACAGAATCGATAGGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTTTTCTAGTGCTCCCTGCTTCACCTCAAAACAGAATCGATAGGGC  400

seq1  ACCAGGGGAGAAATGGATTCAGGTCGGCTCTAGGCGGCTTTATGCACTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGGGAGAAATGGATTCAGGTCGGCTCTAGGCGGCTTTATGCACTTT  450

seq1  CTATTAAACTTGACGGCTAATTTGCAAGTTCACACTTATTAAAAGCTAGG  500
      || ||||||||||||||||||| | |||||||||||||||||||| | ||
seq2  CTCTTAAACTTGACGGCTAATTCGTAAGTTCACACTTATTAAAAGTTTGG  500

seq1  GTTCTTGAAACTCTGGCAGCTGAACCCTCCCAACTATGCACTTAGAAAAT  550
      ||| ||||||||||||||| ||||||||||||||||  ||||||||||| 
seq2  GTTGTTGAAACTCTGGCAGTTGAACCCTCCCAACTAAACACTTAGAAAAC  550

seq1  GGAGCTCAGAGAAGAACCTTGCATCAGGACCCTAGCCCAGGTATTGCTAT  600
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GGAGCTCAGAGAAGAGCCTTGCATCAGGACCCTAGCCCAGGTATTGCTAT  600

seq1  GCTCAAAGACAGAAATTAATTCTCCTTTCATGCTTTCTAGTAAAAGGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GCTCAAAGACAGAAATTAATTCTCCTTTCATGCTTTCTAGTAAAAGGACT  650

seq1  CAGCGAGGCAAAGTAGGAAGAAGCATTAGGTAAGAAGCCAGAAATTCCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGAGGCAAAGTAGGAAGAAGCATTAGGTAAGAAGCCAGAAATTCCCA  700

seq1  TTGAGAGTCTTGCATGGAATTCAAAACTTGTCATTTCATCTGAATTC  747
      ||||||||||||||| |||| ||||||| ||||||||||  ||||||
seq2  TTGAGAGTCTTGCAT-GAATCCAAAACTAGTCATTTCATGAGAATTC  746