BAC Information

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BAC

Clone NameB6Ng01-132K07
Chromosome8 (Build37)
Map Location 110,440,076 - 110,578,868
singlet/doubletdoublet
Overlap genenone
Upstream geneCirh1a, EG234703, Sntb2, Vps4a, Cog8, Nip7, Tmed6, Terf2, EG667847, Cyb5b, LOC100042791, Nfat5, Nqo1, Nob1, Wwp2, LOC100042812, Psmd7, LOC100041744, LOC668038
Downstream geneAtbf1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132K07.bB6Ng01-132K07.g
ACCDH933395DH933396
length1,110698
definitionDH933395|Mus musculus domesticus DNA, BAC clone: B6Ng01-132K07, 5' end.DH933396|Mus musculus domesticus DNA, BAC clone: B6Ng01-132K07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,440,076 - 110,441,203)(110,578,172 - 110,578,868)
sequence
gaattctcgttgaacctgaagctcactgatctggacaggttggctgacac
aatgagtttcagggatccccttgtctccaacccaccaaagctgagaatat
aagcaaatgccaccatactgggcttcattatgtgggttctgtgcctctga
acttggatgtttttgtttgtctggtaccactctactattgagtcatctct
cctattctggagagatgttgaaaaaccaccgaagaatcatgaatccattg
gcacaaaacaggcaaaacgatgtcttgttggtgtaaggatgaagaaaatt
ctgtgacagaaacacacaagtagggctagttcctaaacaaaagagtagac
agcacttgtaaagttttaagcatgatggaatcacagagaagccacagaga
tgctgggtgggaggcaggtgtttctaaggagatggcagattcatcttctg
aaccttcctggaggatctgctgtgtatgtcatatgacttttctttcaagc
acacatgtgtggtttatactattctgaatatgtgacatagccacacttaa
gacatacaaggatgtatatcacatttctatttctcttattctaatataag
aatgacacaaaggctgtcatacaggagcctcaaaatgttgcacttttcaa
aagttgctttcatttactattttttttccaaaataagtagcttcctgttt
gttttgtactcatataaggcttagagatgctgagacaaactatctgagca
ggacaacttacaagaggaaaggaatgacttcggctcactggctcagaggt
tctaggctgtcaccacagaaagggccttggggagccaagcagctcacctt
atggctgccaggaggcagagagaggatgtctcgacaggctagcttttccc
atcatccccactttttagcacacccaagtgctcaggctatgagagagact
gcccacacttgggagagatcttcccatctagttaaaccttctggaacaca
cttgcagactgcgtgcgagacttgtcactgtacttatcgaaactcatagc
actatcaaagcagcacttctgggactagtagctatcattgtgtgtgtgtg
tgtgtgtctg
gaattcttttgcccaaatgtactgtgtgattttttttttttttgattttt
tttttaggggaggatgggtgggaaaactcaaccacacagctccttcaaaa
aatcctgcatgggttgggaagagagtttagttggtctcgtgttttccata
catgcatgaagctttgagtttggtccctagtaaaagtgttgggcctggtg
attccaaatcccagtcctgggagatggagataggagagtcgctggggctt
gctctcccccagtctagcctaattagtgagctccaggttaattctgcctc
agagaagttggttggagtccttgatgacacctgaagctgcccccaggtac
acatgctcacagaacccacttgtacatgaacagtaaacatatccatgcat
tgaaagacagctctacattttttttttaaaaaaagggtatttttttaaat
ggagaaagcattttatctcgatgtcatgtaaggcccccagagtaacagca
gaaataaaagccagctttctacaatcagttaaaattaaaccatgcagtag
caatgtttcttgcaattaacaaaattcttcccagtccttacaaatctgtt
ggcttattgcatcacaattttaagttgattttaacttaactttttgtagg
tctacttaaaccagtatctcagtagcagcagcagggggctgactccgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_110440076_110441203
seq2: B6Ng01-132K07.b_48_1157

seq1  GAATTCTCGTTGAACCTGAAGCTCACTGATCTGGACAGGTTGGCTGACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCGTTGAACCTGAAGCTCACTGATCTGGACAGGTTGGCTGACAC  50

seq1  AATGAGTTTCAGGGATCCCCTTGTCTCCAACCCACCAAAGCTGAGAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTTTCAGGGATCCCCTTGTCTCCAACCCACCAAAGCTGAGAATAT  100

seq1  AAGCAAATGCCACCATACTGGGCTTCATTATGTGGGTTCTGTGCCTCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAATGCCACCATACTGGGCTTCATTATGTGGGTTCTGTGCCTCTGA  150

seq1  ACTTGGATGTTTTTGTTTGTCTGGTACCACTCTACTATTGAGTCATCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGATGTTTTTGTTTGTCTGGTACCACTCTACTATTGAGTCATCTCT  200

seq1  CCTATTCTGGAGAGATGTTGAAAAACCACCGAAGAATCATGAATCCATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTCTGGAGAGATGTTGAAAAACCACCGAAGAATCATGAATCCATTG  250

seq1  GCACAAAACAGGCAAAACGATGTCTTGTTGGTGTAAGGATGAAGAAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAAACAGGCAAAACGATGTCTTGTTGGTGTAAGGATGAAGAAAATT  300

seq1  CTGTGACAGAAACACACAAGTAGGGCTAGTTCCTAAACAAAAGAGTAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGACAGAAACACACAAGTAGGGCTAGTTCCTAAACAAAAGAGTAGAC  350

seq1  AGCACTTGTAAAGTTTTAAGCATGATGGAATCACAGAGAAGCCACAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTTGTAAAGTTTTAAGCATGATGGAATCACAGAGAAGCCACAGAGA  400

seq1  TGCTGGGTGGGAGGCAGGTGTTTCTAAGGAGATGGCAGATTCATCTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGTGGGAGGCAGGTGTTTCTAAGGAGATGGCAGATTCATCTTCTG  450

seq1  AACCTTCCTGGAGGATCTGCTGTGTATGTCATATGACTTTTCTTTCAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTCCTGGAGGATCTGCTGTGTATGTCATATGACTTTTCTTTCAAGC  500

seq1  ACACATGTGTGGTTTATACTATTCTGAATATGTGACATAGCCACACTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGTGTGGTTTATACTATTCTGAATATGTGACATAGCCACACTTAA  550

seq1  GACATACAAGGATGTATATCACATTTCTATTTCTCTTATTCTAATATAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATACAAGGATGTATATCACATTTCTATTTCTCTTATTCTAATATAAG  600

seq1  AATGACACAAAGGCTGTCATACAGGAGCCTCAAAATGTTGCACTTTTCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACACAAAGGCTGTCATACAGGAGCCTCAAAATGTTGCACTTTTCAA  650

seq1  AAGTTGCTTTCATTTACTATTTTTTTTCCAAAATAAGTAGCTTCCTGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGCTTTCATTTACTATTTTTTTTCCAAAATAAGTAGCTTCCTGTTT  700

seq1  GTTTTGTACTCATATAAGGCTTAGAGATGCTGAGACAAACTATCTGAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTACTCATATAAGGCTTAGAGATGCTGAGACAAACTATCTGAGCA  750

seq1  GGACAACTTACAAGAGG-AAGGAATGACTTCGGCTCACTGGCTCAGAGGT  799
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GGACAACTTACAAGAGGAAAGGAATGACTTCGGCTCACTGGCTCAGAGGT  800

seq1  TCTAGGCTGTCACCACAG-AAGGGCCTTGGGGAGCCAAGCAGCTCACCTT  848
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCTAGGCTGTCACCACAGAAAGGGCCTTGGGGAGCCAAGCAGCTCACCTT  850

seq1  ATGGCTGCCAGGAGGCAGAGAGAGGATGTCTCGACAGGCTAGCTTTTCCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATGGCTGCCAGGAGGCAGAGAGAGGATGTCTCGACAGGCTAGCTTTT-CC  899

seq1  CATCATCCCCACTTTTTAGCACACCCAAGTGCTCAGGCTATGAGAGAAGA  948
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CATCATCCCCACTTTTTAGCACACCCAAGTGCTCAGGCTATGAGAG-AGA  948

seq1  CTGCCCACACTTGGGAGAGATCTTCCCCATCTAGTTAAACCTTCTGGAAA  998
      |||||||||||||||||||||||| |||||||||||||||||||||| ||
seq2  CTGCCCACACTTGGGAGAGATCTT-CCCATCTAGTTAAACCTTCTGG-AA  996

seq1  CACACTTGCAGACATGCGTGCGAGACTTGTCACTGTACCTTATCGAAAAC  1048
      ||||||||||||| ||||||||||||||||||||||| ||||||| ||||
seq2  CACACTTGCAGAC-TGCGTGCGAGACTTGTCACTGTA-CTTATCG-AAAC  1043

seq1  TCATAAGGCACCAATTCAAAGCCAGCACTTTCTGTGGTTCTTAGTAGCCT  1098
      |||||  |||| |  |||||| |||||| ||||| |     |||||| ||
seq2  TCATA--GCACTA--TCAAAG-CAGCAC-TTCTGGG---ACTAGTAG-CT  1083

seq1  ATCATTTGTGTGTGTGTGTGTGTGTGTCTG  1128
      |||||   ||||||||||||||||||||||
seq2  ATCAT---TGTGTGTGTGTGTGTGTGTCTG  1110

seq1: chr8_110578172_110578868
seq2: B6Ng01-132K07.g_66_763 (reverse)

seq1  ACGGAGTCAGCCCCCTGCTGCTGCTACTGAGATACTGGTTTAAGTAGACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGAGTCAGCCCCCTGCTGCTGCTACTGAGATACTGGTTTAAGTAGACC  50

seq1  TACAAAAGTTTAAGTTAAAATCAACTTAAAATTGTGATGCAATAAGCCAA  100
      |||||||  |||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAAAGTTAAGTTAAAATCAACTTAAAATTGTGATGCAATAAGCCAA  100

seq1  CAGATTTGTAAGGACTGGGAAGAATTTTGTTAATTGCAAG-AACATTGCT  149
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CAGATTTGTAAGGACTGGGAAGAATTTTGTTAATTGCAAGAAACATTGCT  150

seq1  ACTGCATGGTTTAATTTTAACTGATTGTAGAAAGCTGGCTTTTATTTCTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCATGGTTTAATTTTAACTGATTGTAGAAAGCTGGCTTTTATTTCTG  200

seq1  CTGTTACTCTGGGGGCCTTACATGACATCGAGATAAAATGCTTTCTCCAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTACTCTGGGGGCCTTACATGACATCGAGATAAAATGCTTTCTCCAT  250

seq1  TTAAAAAAATACCCTTTTTTTAAAAAAAAAATGTAGAGCTGTCTTTCAAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAATACCCTTTTTTTAAAAAAAAAATGTAGAGCTGTCTTTCAAT  300

seq1  GCATGGATATGTTTACTGTTCATGTACAAGTGGGTTCTGTGAGCATGTGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGATATGTTTACTGTTCATGTACAAGTGGGTTCTGTGAGCATGTGT  350

seq1  ACCTGGGGGCAGCTTCAGGTGTCATCAAGGACTCCAACCAACTTCTCTGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGGGGCAGCTTCAGGTGTCATCAAGGACTCCAACCAACTTCTCTGA  400

seq1  GGCAGAATTAACCTGGAGCTCACTAATTAGGCTAGACTGGGGGAGAGCAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAATTAACCTGGAGCTCACTAATTAGGCTAGACTGGGGGAGAGCAA  450

seq1  GCCCCAGCGACTCTCCTATCTCCATCTCCCAGGACTGGGATTTGGAATCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAGCGACTCTCCTATCTCCATCTCCCAGGACTGGGATTTGGAATCA  500

seq1  CCAGGCCCAACACTTTTACTAGGGACCAAACTCAAAGCTTCATGCATGTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCCAACACTTTTACTAGGGACCAAACTCAAAGCTTCATGCATGTA  550

seq1  TGGAAAACACGAGACCAACTAAACTCTCTTCCCAACCCATGCAGGATTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAACACGAGACCAACTAAACTCTCTTCCCAACCCATGCAGGATTTT  600

seq1  TTGAAGGAGCTGTGTGGTTGAGTTTTCCCACCCATCCTCCCCTAAAAAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGGAGCTGTGTGGTTGAGTTTTCCCACCCATCCTCCCCTAAAAAAA  650

seq1  AAATCAAAAAAAAAAAAAATCACACAGTACATTTGGGCAAAAGAATTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAAAAAAAAAAAAAATCACACAGTACATTTGGGCAAAAGAATTC  698