BAC Information

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BAC

Clone NameB6Ng01-132K21
Chromosome8 (Build37)
Map Location 45,971,537 - 46,084,063
singlet/doubletdoublet
Overlap geneLOC100039508, Fat1
Upstream genenone
Downstream geneLOC100039673, Mtnr1a, EG622523, F11, Klkb1, Cyp4v3, BC035537, Tlr3, Sorbs2, Pdlim3, Ccdc110, 1700029J07Rik, 1810047C23Rik, Ankrd37
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132K21.bB6Ng01-132K21.g
ACCDH933419DH933420
length1,2111,149
definitionDH933419|Mus musculus domesticus DNA, BAC clone: B6Ng01-132K21, 5' end.DH933420|Mus musculus domesticus DNA, BAC clone: B6Ng01-132K21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,971,537 - 45,972,770)(46,082,920 - 46,084,063)
sequence
gaattcattcatgagggcaggttcccataacctatgttccactagcccct
actttataatgttaccaacacataccaatgctaccgacatagagtgatgg
ttagaattaattgccagcttgccataacctagacttatccaggaaaagaa
gctcaaggaaggactgcctgcaataggttgggtgtgggaatgtctgcaag
agactgaatcatgttaatggatttgggaggatccagaccactatgggcag
caccattccctatgaagtcattcccgatatgtagctgagtagagaaagga
gctaaacacaagcaagcaagtgggaatgcaggcatttatttctctctgct
cttatctgtggatgagatgtgaccagatggtccaagttccttccaccttg
acttctccacaataatggaaagcggcctgaaattgtgagctaaaattaac
cctctccccccttaaattgcttcccttcaggatattttatcacaacaaaa
catggcaccaggacatgaaaacaggccattaatgggaaccacatttccaa
cacaggaacttctgggaaagaaacacacccaacatccttaacccactctc
ttctacgaaatccttgtgtcagagtccagcaattcaaatgtgaaggtctt
tgagaggtcacattcctaccacaaacgttaataaagccattcatgttaac
agaagaggagcagacatttatggaaaaaataacatttccccaaagcacaa
actaaaatttaatgtgaagactgacattgttttgcatcctataaacgtct
tcaataattcatagaagatggctatattctcatctatttctgcatgcagt
tggcccttgtgggctaatttatttaacgtaaatacactgttaaatgcttg
ctttttaaaaatgtttttaaaactttttagatagccatgggcatgctcac
ttagttttgcaacaaacttgattgtggtaaatttgaaaatattttttata
atcctttgagatttcatgcgatgtagtcttattagattcaccatttcctt
tcagtctcatccccacttctcagactcttaccttgggtcttctttttttt
taatactcaatcaatcatttatgctacaatattctggaagtaggccattc
actgggagaggccattcaccattgcgaatccttgagtaacttactctctg
ttctcgattaa
gaattcacttaactcgaactttcagaggtccgcagaaaacactaataaaa
ttaatcagacggtcactctgaagccacacaaggaggggctgaggtcagta
tcgcccgcttttcttctgcttttacatctgttctgcgagctgtttcctgg
tggaaattagtggtttcagaacacaagatcagaaggcaaatcaattttgc
tgtgaattaattgtttttagtattctatataagttatgtaggagggaagg
aggcctggagggagggaaagcactcaatcaactgtaaggttaatatctaa
ggttaacatcggcaaacttcaacgaaagcatcttaagtgcaaaatcttac
atgtactttagtcactgacgttcagtgacctagaatcgcagaattctcct
tgatccaactgaccctaaggatcccacgaaaacagatttgatggggggaa
aaatgcaccagataaggcaggagataaaacctgacttttaagactttaga
ggtaatacatttcaccataaaataaaaactagtaatgagaaatagatttt
aaaaaagtctatagcccttaaaatacacgaaggtgactttctgttgttgt
tgttaatgaatccctgccattgtggcgtgagtggcctttcagttccttcc
tttctagagctatcaaatgttacaccggaaaccctcggaagttgtttgcg
gctgtaactacttcctattgaactgtgttaggtctcctttccagccacaa
taaaatgccattttcttattgcctcattactcagtaatacaagactcact
tactaaaggagcatgcagctagaatgcgattaggtgcccagtatatctac
tacccactgcagtattctgcagtgattaaagaacgctcggtttgtcgatt
actaaatgtaatattctattttccactaaatctgtttgtatcttctactg
aacagtcacaccatcccttatatacccgacacagatagctcttttttgaa
atacctctattcttcatgtaagcaggaaattcagaggctcttgtatattg
gtgtttcttcttaaaagcacaaccaatgtataaatggaagtcctttttga
tatgtaacaactcagtttcagactagttacgaaaaaaaaacagggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_45971537_45972770
seq2: B6Ng01-132K21.b_48_1258

seq1  GAATTCATTCATGAGGGCAGGTTCCCATAACCTATGTTCCACTAGCCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCATGAGGGCAGGTTCCCATAACCTATGTTCCACTAGCCCCT  50

seq1  ACTTTATAATGTTACCAACACATACCAATGCTACCGACATAGAGTGATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATAATGTTACCAACACATACCAATGCTACCGACATAGAGTGATGG  100

seq1  TTAGAATTAATTGCCAGCTTGCCATAACCTAGACTTATCCAGGAAAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATTAATTGCCAGCTTGCCATAACCTAGACTTATCCAGGAAAAGAA  150

seq1  GCTCAAGGAAGGACTGCCTGCAATAGGTTGGGTGTGGGAATGTCTGCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAGGAAGGACTGCCTGCAATAGGTTGGGTGTGGGAATGTCTGCAAG  200

seq1  AGACTGAATCATGTTAATGGATTTGGGAGGATCCAGACCACTATGGGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGAATCATGTTAATGGATTTGGGAGGATCCAGACCACTATGGGCAG  250

seq1  CACCATTCCCTATGAAGTCATTCCCGATATGTAGCTGAGTAGAGAAAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATTCCCTATGAAGTCATTCCCGATATGTAGCTGAGTAGAGAAAGGA  300

seq1  GCTAAACACAAGCAAGCAAGTGGGAATGCAGGCATTTATTTCTCTCTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAACACAAGCAAGCAAGTGGGAATGCAGGCATTTATTTCTCTCTGCT  350

seq1  CTTATCTGTGGATGAGATGTGACCAGATGGTCCAAGTTCCTTCCACCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCTGTGGATGAGATGTGACCAGATGGTCCAAGTTCCTTCCACCTTG  400

seq1  ACTTCTCCACAATAATGGAAAGCGGCCTGAAATTGTGAGCTAAAATTAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCCACAATAATGGAAAGCGGCCTGAAATTGTGAGCTAAAATTAAC  450

seq1  CCTCTCCCCCCTTAAATTGCTTCCCTTCAGGATATTTTATCACAACAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCCCCCTTAAATTGCTTCCCTTCAGGATATTTTATCACAACAAAA  500

seq1  CATGGCACCAGGACATGAAAACAGGCCATTAATGGGAACCACATTTCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCACCAGGACATGAAAACAGGCCATTAATGGGAACCACATTTCCAA  550

seq1  CACAGGAACTTCTGGGAAAGAAACACACCCAACATCCTTAACCCACTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGAACTTCTGGGAAAGAAACACACCCAACATCCTTAACCCACTCTC  600

seq1  TTCTACGAAATCCTTGTGTCAGAGTCCAGCAATTCAAATGTGAAGGTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACGAAATCCTTGTGTCAGAGTCCAGCAATTCAAATGTGAAGGTCTT  650

seq1  TGAGAGGTCACATTCCTACCACAAACGTTAATAAAGCCATTCATGTTAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGTCACATTCCTACCACAAACGTTAATAAAGCCATTCATGTTAAC  700

seq1  AGAAGAGGAGCAGACATTTATGGAAAAAATAACATTTCCCCAAAGCACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGGAGCAGACATTTATGGAAAAAATAACATTTCCCCAAAGCACAA  750

seq1  ACTAAAATTTAATGTGAAGACTGACATTGTTTTGCATCCTATAAACGTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAATTTAATGTGAAGACTGACATTGTTTTGCATCCTATAAACGTCT  800

seq1  TCAATAATTCATAGAAGATGGCTATATTCTCATCTATTTCTGCATGCAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAATTCATAGAAGATGGCTATATTCTCATCTATTTCTGCATGCAGT  850

seq1  TGGCCCTTGTGGGCTAATTTATTTAACGTAAATACACTGTTAAATGCTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCTTGTGGGCTAATTTATTTAACGTAAATACACTGTTAAATGCTTG  900

seq1  CTTTTTAAAAAATGTTTTTAAAAACTTTTTAGATAGCCATGGGCATGCTC  950
      |||||| |||||||||||| ||||||||||||||||||||||||||||||
seq2  CTTTTT-AAAAATGTTTTT-AAAACTTTTTAGATAGCCATGGGCATGCTC  948

seq1  ACTTAGTTTTGCAACAAAACTTGATTGTGGTAAAATTTGAAAATATTTTT  1000
      ||||||||||||||| ||||||||||||||| ||||||||||||||||||
seq2  ACTTAGTTTTGCAAC-AAACTTGATTGTGGT-AAATTTGAAAATATTTTT  996

seq1  ATTAATCCTTTGAGAATTTCATGCGATGTAGTCTTATTAGATTCACCATT  1050
        |||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TATAATCCTTTGAG-ATTTCATGCGATGTAGTCTTATTAGATTCACCATT  1045

seq1  TCCTTTCAGTCTCATCCCCACCTTCTCAGACTCCTAACTTTGTGTCTTCT  1100
      |||||||||||||||||||| ||||||||||| || || ||| |||||| 
seq2  TCCTTTCAGTCTCATCCCCA-CTTCTCAGACT-CTTACCTTGGGTCTTC-  1092

seq1  TTTTTTTTTTTTAATAACTCATTCAATCCAATTTATGCTACCCATATATT  1150
         |||||||||||| ||||| ||||||  |||||||||||    |||||
seq2  ---TTTTTTTTTAAT-ACTCAATCAATC--ATTTATGCTAC---AATATT  1133

seq1  CTTGGATGTAGGCCATTCACTGGAGAGTGGCCAATCCACCATTGTCGAAA  1200
      | |||| |||||||||||||||| ||| |||| || |||||||| || ||
seq2  C-TGGAAGTAGGCCATTCACTGG-GAGAGGCC-ATTCACCATTG-CG-AA  1178

seq1  TCCTTAAAATTAACTTACTCTCTGTCCT-GATTAA  1234
      |||||   | ||||||||||||||| || ||||||
seq2  TCCTT--GAGTAACTTACTCTCTGTTCTCGATTAA  1211

seq1: chr8_46082920_46084063
seq2: B6Ng01-132K21.g_66_1214 (reverse)

seq1  CCCTCCCCTGTTTTTTTTCGTAACCTTGTCTGGGACTGAGTTGTT-CATA  49
      |||||||   ||||||||||||| || |||||  ||||||||||| ||||
seq2  CCCTCCCTGTTTTTTTTTCGTAA-CTAGTCTGAAACTGAGTTGTTACATA  49

seq1  CTCAAAAGGACTAC--ATTATACATTTGTTGTGCTTTTAGGA--GAACAC  95
         ||||||||| |   ||||||||| |||||||||||| ||   |||||
seq2  TCAAAAAGGACTTCCATTTATACATTGGTTGTGCTTTTAAGAAGAAACAC  99

seq1  CAATATACAAGGGCCTCTGATTTCCTTGCTTACATGTAGAATAGA-GTAT  144
      ||||||||||| |||||||| || | |||||||||| |||||||| ||||
seq2  CAATATACAAGAGCCTCTGAATTTCCTGCTTACATGAAGAATAGAGGTAT  149

seq1  TTC-ATAAAGAGCTATCTGTGTCGGGTATATAAGGGATGGTGTGACTGTT  193
      ||| | ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAAAAGAGCTATCTGTGTCGGGTATATAAGGGATGGTGTGACTGTT  199

seq1  CAGTAGAAGATTACAAACAGATTTAGTGG-AAATAGAATATTTACATTTA  242
      |||||||||| |||||||||||||||||| |||||||||| |||||||||
seq2  CAGTAGAAGA-TACAAACAGATTTAGTGGAAAATAGAATA-TTACATTTA  247

seq1  GTAATCGACAAACCGAGCGTTCTTTAATCACTGCAGAATACTGCAGTGGG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCGACAAACCGAGCGTTCTTTAATCACTGCAGAATACTGCAGTGGG  297

seq1  TAGTAGATATACTGGGCACCTAATCGCATTCTAGCTGCATGCTCCTTTAG  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGATATACTGGGCACCTAATCGCATTCTAGCTGCATGCTCCTTTAG  347

seq1  TAAGTGAGTCTTGTATTACTGAGTAATGAGGCAATAAGAAAATGGCATTT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGAGTCTTGTATTACTGAGTAATGAGGCAATAAGAAAATGGCATTT  397

seq1  TATTGTGGCTGGAAAGGAGACCTAACACAGTTCAATAGGAAGTAGTTACA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGGCTGGAAAGGAGACCTAACACAGTTCAATAGGAAGTAGTTACA  447

seq1  GCCGCAAACAACTTCCGAGGGTTTCCGGTGTAACATTTGATAGCTCTAGA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCAAACAACTTCCGAGGGTTTCCGGTGTAACATTTGATAGCTCTAGA  497

seq1  AAGGAAGGAACTGAAAGGCCACTCACGCCACAATGGCAGGGATTCATTAA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGAACTGAAAGGCCACTCACGCCACAATGGCAGGGATTCATTAA  547

seq1  CAACAACAACAGAAAGTCACCTTCGTGTATTTTAAGGGCTATAGACTTTT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACAACAGAAAGTCACCTTCGTGTATTTTAAGGGCTATAGACTTTT  597

seq1  TTAAAATCTATTTCTCATTACTAGTTTTTATTTTATGGTGAAATGTATTA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATCTATTTCTCATTACTAGTTTTTATTTTATGGTGAAATGTATTA  647

seq1  CCTCTAAAGTCTTAAAAGTCAGGTTTTATCTCCTGCCTTATCTGGTGCAT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAAAGTCTTAAAAGTCAGGTTTTATCTCCTGCCTTATCTGGTGCAT  697

seq1  TTTTCCCCCCATCAAATCTGTTTTCGTGGGATCCTTAGGGTCAGTTGGAT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCCCCATCAAATCTGTTTTCGTGGGATCCTTAGGGTCAGTTGGAT  747

seq1  CAAGGAGAATTCTGCGATTCTAGGTCACTGAACGTCAGTGACTAAAGTAC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGAATTCTGCGATTCTAGGTCACTGAACGTCAGTGACTAAAGTAC  797

seq1  ATGTAAGATTTTGCACTTAAGATGCTTTCGTTGAAGTTTGCCGATGTTAA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAGATTTTGCACTTAAGATGCTTTCGTTGAAGTTTGCCGATGTTAA  847

seq1  CCTTAGATATTAACCTTACAGTTGATTGAGTGCTTTCCCTCCCTCCAGGC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGATATTAACCTTACAGTTGATTGAGTGCTTTCCCTCCCTCCAGGC  897

seq1  CTCCTTCCCTCCTACATAACTTATATAGAATACTAAAAACAATTAATTCA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCCCTCCTACATAACTTATATAGAATACTAAAAACAATTAATTCA  947

seq1  CAGCAAAATTGATTTGCCTTCTGATCTTGTGTTCTGAAACCACTAATTTC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAAATTGATTTGCCTTCTGATCTTGTGTTCTGAAACCACTAATTTC  997

seq1  CACCAGGAAACAGCTCGCAGAACAGATGTAAAAGCAGAAGAAAAGCGGGC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGGAAACAGCTCGCAGAACAGATGTAAAAGCAGAAGAAAAGCGGGC  1047

seq1  GATACTGACCTCAGCCCCTCCTTGTGTGGCTTCAGAGTGACCGTCTGATT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTGACCTCAGCCCCTCCTTGTGTGGCTTCAGAGTGACCGTCTGATT  1097

seq1  AATTTTATTAGTGTTTTCTGCGGACCTCTGAAAGTTCGAGTTAAGTGAAT  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTATTAGTGTTTTCTGCGGACCTCTGAAAGTTCGAGTTAAGTGAAT  1147

seq1  TC  1144
      ||
seq2  TC  1149