BAC Information

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BAC

Clone NameB6Ng01-133C19
Chromosome8 (Build37)
Map Location 61,676,704 - 61,677,733
singlet/doubletsinglet
Overlap genenone
Upstream gene4930431L04Rik, BC030500, LOC665116
Downstream geneLOC436042
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133C19.bB6Ng01-133C19.g
ACCDH933792DH933793
length6161,018
definitionDH933792|Mus musculus domesticus DNA, BAC clone: B6Ng01-133C19, 5' end.DH933793|Mus musculus domesticus DNA, BAC clone: B6Ng01-133C19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctggagggtccccccaacctcctacttcctgaggttgcctgtttc
cattctttctgctgaccctcaggacttcattccttttccctcacccaata
gaatatcaggttctctcctccctccaaataccctgcccccccccgttcac
tttccctctcaggtgcctccttccctccctgacaccattagtgaggctat
agagtgctcagatgcagatattgtacccaacaaatggacagaagcagctc
agccctgttgttgaattagggaaaggctgaaagaagataaggagaagagc
aaccctgtaggaggactagcagtctcaattaacattcacccacgtaatct
cttaaaatctagaacaccaaacagacatacgctagctgatatgaggcccc
caacacacatacagtagaggaatgccagatgtgtgttcattcagagatgc
acctaagcctcaagaaactagaggccccagggcatttagaagttaagtgg
tgtgggggtgaagacagaggggtggagagaagggatgagatgtggaacag
ttggatggtatactggggtgggggattaaagtatggagtgtaaatatacc
aaataactatattgat

gaattctaactgtcaaaatgctgaaaattcagggtagaacagtaaggcaa
aaaggccaaagcattggtgtgaatgtgaggaagacatatccctaagcttg
attcatagggtttttatcatatttgaaaataattattggaggaaaaccat
attttgtttctgagagtagagaaaattgttactttttagagtattctatt
tttaaaacaagattgacttgggaaagaaattgtattatctgagactaaat
tttgtgatgaaagttggtgggtattctttagaacataacttactttgggg
aaaacaccaaatgactcagttctgtgtattttttgataacaagccttggt
ctttgaagaatgtagatgaatgggggcaacaaaagtacattattaaaaaa
tcgtggtcaatctgaggatattgtgcgttgtttatttctaagtgtatgtt
attctagaaaagacaatatcatagaggctagaaaatgaccagaaagcctg
gaggggaaagaatttggagtaagtgaaacacaggattttttagggcagag
aaacttctgcaggatgcactattcttcagtcagaaccataacaaatacct
taatgttgaaaagtccgaaggctataacaagccatatttcccatgcagtt
ttgtctaggaatttgcaactgatatgtaaagaacaaatattcagttcatc
ataagaggcatttcagaatgtaaacactcagacaataaggtaaatagaac
acttgctagtgatatacttgataaggttgtaatatttatatatttaaaga
aatccttccattatcaagccaaaaatgcattactatgacagattaaacac
agtgaaggagttcaagatttaatttttaaaacatacttgtagctacatga
tgtctgctcaacaattatgaatgaaatgtaaataaaagctctcatgacat
gaatttacacccgttatccacagaaaaattaatggatcaaaaaatacaga
gcagtgagatgtgggcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_61676704_61677733
seq2: B6Ng01-133C19.g_68_1085

seq1  GAATTCTAACTGTCAAAATGCTGAAAATTCAGGGTAGAACAGTAAGGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAACTGTCAAAATGCTGAAAATTCAGGGTAGAACAGTAAGGCAA  50

seq1  AAAGGCCAAAGCATTGGTGTGAATGTGAGGAAGACATATCCCTAAGCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCCAAAGCATTGGTGTGAATGTGAGGAAGACATATCCCTAAGCTTG  100

seq1  ATTCATAGGGTTTTTATCATATTTGAAAATAATTATTGGAGGAAAACCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAGGGTTTTTATCATATTTGAAAATAATTATTGGAGGAAAACCAT  150

seq1  ATTTTGTTTCTGAGAGTAGAGAAAATTGTTACTTTTTAGAGTATTCTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTTCTGAGAGTAGAGAAAATTGTTACTTTTTAGAGTATTCTATT  200

seq1  TTTAAAACAAGATTGACTTGGGAAAGAAATTGTATTATCTGAGACTAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAACAAGATTGACTTGGGAAAGAAATTGTATTATCTGAGACTAAAT  250

seq1  TTTGTGATGAAAGTTGGTGGGTATTCTTTAGAACATAACTTACTTTGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGATGAAAGTTGGTGGGTATTCTTTAGAACATAACTTACTTTGGGG  300

seq1  AAAACACCAAATGACTCAGTTCTGTGTATTTTTTGATAACAAGCCTTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACCAAATGACTCAGTTCTGTGTATTTTTTGATAACAAGCCTTGGT  350

seq1  CTTTGAAGAATGTAGATGAATGGGGGCAACAAAAGTACATTATTAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAGAATGTAGATGAATGGGGGCAACAAAAGTACATTATTAAAAAA  400

seq1  TCGTGGTCAATCTGAGGATATTGTGCGTTGTTTATTTCTAAGTGTATGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGGTCAATCTGAGGATATTGTGCGTTGTTTATTTCTAAGTGTATGTT  450

seq1  ATTCTAGAAAAGACAATATCATAGAGGCTAGAAAATGACCAGAAAGCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAGAAAAGACAATATCATAGAGGCTAGAAAATGACCAGAAAGCCTG  500

seq1  GAGGGGAAAGAATTTGGAGTAAGTGAAACACAGGATTTTTTAGGGCAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGAAAGAATTTGGAGTAAGTGAAACACAGGATTTTTTAGGGCAGAG  550

seq1  AAACTTCTGCAGGATGCACTATTCTTCAGTCAGAACCATAAC-AATA-CA  598
      |||||||||||||||||||||||||||||||||||||||||| |||| | 
seq2  AAACTTCTGCAGGATGCACTATTCTTCAGTCAGAACCATAACAAATACCT  600

seq1  TAATGTTG-AAAGTCCGAAGGCTATAACAAGCCATATTTCCCATGCAG-T  646
      |||||||| ||||||||||||||||||||||||||||||||||||||| |
seq2  TAATGTTGAAAAGTCCGAAGGCTATAACAAGCCATATTTCCCATGCAGTT  650

seq1  TTGTCTAGGAATTTGCAACTGATATGTAAAGAACAAATATTCAGTTCATC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTAGGAATTTGCAACTGATATGTAAAGAACAAATATTCAGTTCATC  700

seq1  ATAAGAGGCATTTCAGAATGTAAACACTCAGACAATAAGGTAAATAGAAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAGGCATTTCAGAATGTAAACACTCAGACAATAAGGTAAATAGAAC  750

seq1  ACTTGCTAGTGATATACTTGATAAGGTTGTAATATTTATATATTTAAAGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCTAGTGATATACTTGATAAGGTTGTAATATTTATATATTTAAAGA  800

seq1  AATCCTCCAATTATCAAGCCAAAAATGCATTACTATGACAGATTAAAACA  846
      |||||| | ||||||||||||||||||||||||||||||||||| |||||
seq2  AATCCTTCCATTATCAAGCCAAAAATGCATTACTATGACAGATT-AAACA  849

seq1  CAGGTGAAGGAGTTCAAGATCTTAATTTTTAAAAACATACTTGTAGCTAA  896
      || ||||||||||||||||| ||||||||| ||||||||||||||||| |
seq2  CA-GTGAAGGAGTTCAAGAT-TTAATTTTT-AAAACATACTTGTAGCT-A  895

seq1  CATGAATGTCTGCTCAAACAATTTATGAATGAAATGTAAATAAAAGC-CT  945
      |||| |||||||||| ||||| ||||||||||||||||||||||||| ||
seq2  CATG-ATGTCTGCTC-AACAA-TTATGAATGAAATGTAAATAAAAGCTCT  942

seq1  CAATGACATGAATTTACACCCGTTATCACACAAGAAAAAATAAATGGATC  995
      | ||||||||||||||||||||||||| ||||   |||||| ||||||||
seq2  C-ATGACATGAATTTACACCCGTTATC-CACA--GAAAAATTAATGGATC  988

seq1  AAAAAAATAACAAGAGCCAGTGAGAATGTGGGCAA  1030
       ||||||||   |||| ||||||| ||||||||||
seq2  -AAAAAATA--CAGAG-CAGTGAG-ATGTGGGCAA  1018


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