BAC Information

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BAC

Clone NameB6Ng01-133I17
Chromosome8 (Build37)
Map Location 13,828,268 - 13,965,735
singlet/doubletdoublet
Overlap geneAF366264, D8Ertd457e, 2410022L05Rik, EG665536, Fbxo25, LOC100041103, 2610019F03Rik
Upstream geneAtp11a, LOC100040229, Mcf2l, F7, F10, Proz, Pcid2, Cul4a, Lamp1, Grtp1, Adprhl1, Dcun1d2, Tmco3, Tfdp1, Atp4b, Grk1, Gm687, Gas6, LOC434282, 1700029H14Rik, Rasa3, 4932443I19Rik, LOC665516, Cdc16, Upf3a
Downstream geneEG546036, Erich1, Dlgap2, LOC100041140, C030037F17Rik, Cln8, Arhgef10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133I17.bB6Ng01-133I17.g
ACCDH934062DH934063
length1,0561,064
definitionDH934062|Mus musculus domesticus DNA, BAC clone: B6Ng01-133I17, 5' end.DH934063|Mus musculus domesticus DNA, BAC clone: B6Ng01-133I17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,828,268 - 13,829,330)(13,964,673 - 13,965,735)
sequence
gaattcatataggcaaatcaacagcatacactgtatcatatagtgaattc
atataggcaagtcaacagcatacactgtatcatatagtgaattcatatag
gaaagtcaacagcatacattgtatcagctcatgaagcctgttgcaggcac
tttctgtatagagctattgacctgatttatactccagttcaattaatcct
ttcaggaaaatgatccaacgtgaagagcggttaagacatctctccacatg
gtcaattagtaagcccataagacaagatacatttttaagtgaaaaattat
cagaggggagtctttccatgaaattacaggatcgagatgtttgttggtgt
tgaattttatgactttgtagaatatctattgaggttatgatctttttttt
cctgttcagcgtgtacaatgggtttctgttacctggaacaggttgaatct
ctctagggacctcctggtctgcatttctcattacattctttctggcactt
agcacctcagctcaaaggaacgttcattatttgctctgtaattcatgccg
ctgtcttggagcacctctttcatctttgtagtaatttttgctctgaaaca
cctccttcccacatcctttactgaaatcctactttacaacccacttcacc
tgcataacgaaagaacaacctacttctccacttgagatcattgtttccct
tccttctgtgggttaccataggtattctctacatcggccacaccttagtg
tctctgcagaggttaagaaacatatcaaagcttggctagccacacctact
cctccattctatgcacgtaatttccacagcaatctgaacagtggccagga
ttagtcttcccagtctcttctagatatgtgggctaaagtttccttttcat
tcatagcacaaagatgcttgctggtacagaaaagtgtttgaaagagagtg
catggggcagctagttcccttctgtagccagtgatgctgggagtgtagct
ctttttctttattataataatcatccattcattacatctcaatgatatcc
atttcc
gaattctttgacatgcagcacaattaggttcctgttctaacttgttataa
tattgcggttgcaaatacttaaaattaattttagtgtaattgattcctag
tttcctatctgacagtagactttacatttttaggggtgagagggcaggct
atttgtttgtgtcctggactggcttaatattacactgccttgatattgca
tatggaatctcagagagggacagcgtatatgttgtttctgcagtttgagg
tggatggtgagtcccttgcgccctgttctccttctgtttgcaactctaaa
ttctcttccttcccacttcctgcctgggcacccttagagtgggatggaga
ttggctttgcctagaacaggaagaccagtgccgctcgctcaagacctggg
gtctgagccaagaacatgagtggtgttttatagcaggaggaaagaagatc
ctgcaaaggtgaaatggcaagtgaaccattccccccgactgcgtggataa
atcacacgtgtcaaggaaggaaagctaaaaataagtcctgccctccgtgc
agtctcaggcaaaagtgtcaaaactctaggaagaagagctacagagaggc
tagccccactggccagtcagttctggcactcgcgtttcaagacagctatc
cttgtcaaaaccgcaggaagttggcccagaggaactggagctccagcctg
tggggagcatgcccttttccttcttgcccatgttggtactgttgcctgag
gatctctgctgtccaggcactttgggtccccagagctgctctcccagtgt
gggtctacttataggttcctgggttgtcgctcatgtccactttaccaggc
acctcgggtgcgtccttcagttcacgtgaccccgcctcccccagcagttt
caatctggatcctttcctgtcttgttttatcttttagtgagatcagccag
acctatttacgtatgttttcattgcagattgatatttactgtcactagaa
gctacagagcctcaattgctggccctggcctttggccggcagcgatgggg
tggggggtggaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_13828268_13829330
seq2: B6Ng01-133I17.b_47_1102

seq1  GAATTCATATAGGCAAATCAACAGCATACACTGTATCATATAGTGAATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATAGGCAAATCAACAGCATACACTGTATCATATAGTGAATTC  50

seq1  ATATAGGCAAGTCAACAGCATACACTGTATCATATAGTGAATTCATATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGGCAAGTCAACAGCATACACTGTATCATATAGTGAATTCATATAG  100

seq1  GAAAGTCAACAGCATACATTGTATCAGCTCATGAAGCCTGTTGCAGGCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTCAACAGCATACATTGTATCAGCTCATGAAGCCTGTTGCAGGCAC  150

seq1  TTTCTGTATAGAGCTATTGACCTGATTTATACTCCAGTTCAATTAATCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTATAGAGCTATTGACCTGATTTATACTCCAGTTCAATTAATCCT  200

seq1  TTCAGGAAAATGATCCAACGTGAAGAGCGGTTAAGACATCTCTCCACATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGAAAATGATCCAACGTGAAGAGCGGTTAAGACATCTCTCCACATG  250

seq1  GTCAATTAGTAAGCCCATAAGACAAGATACATTTTTAAGTGAAAAATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATTAGTAAGCCCATAAGACAAGATACATTTTTAAGTGAAAAATTAT  300

seq1  CAGAGGGGAGTCTTTCCATGAAATTACAGGATCGAGATGTTTGTTGGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGGAGTCTTTCCATGAAATTACAGGATCGAGATGTTTGTTGGTGT  350

seq1  TGAATTTTATGACTTTGTAGAATATCTATTGAGGTTATGATCTTTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTTATGACTTTGTAGAATATCTATTGAGGTTATGATCTTTTTTTT  400

seq1  CCTGTTCAGCGTGTACAATGGGTTTCTGTTACCTGGAACAGGTTGAATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTCAGCGTGTACAATGGGTTTCTGTTACCTGGAACAGGTTGAATCT  450

seq1  CTCTAGGGACCTCCTGGTCTGCATTTCTCATTACATTCTTTCTGGCACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGGGACCTCCTGGTCTGCATTTCTCATTACATTCTTTCTGGCACTT  500

seq1  AGCACCTCAGCTCAAAGGAACGTTCATTATTTGCTCTGTAATTCATGCCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCTCAGCTCAAAGGAACGTTCATTATTTGCTCTGTAATTCATGCCG  550

seq1  CTGTCTTGGAGCACCTCTTTCATCTTTGTAGTAATTTTTGCTCTGAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTGGAGCACCTCTTTCATCTTTGTAGTAATTTTTGCTCTGAAACA  600

seq1  CCTCCTTCCCACATCCTTTACTGAAATCCTACTTTACAACCCACTTCACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTCCCACATCCTTTACTGAAATCCTACTTTACAACCCACTTCACC  650

seq1  TGCATAACGAAAGAACAACCTACTTCTCCACTTGAGATCATTGTTTCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAACGAAAGAACAACCTACTTCTCCACTTGAGATCATTGTTTCCCT  700

seq1  TCCTTCTGTGGGTTACCATAGGTATTCTCTACATCGGCCACACCTTAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTGTGGGTTACCATAGGTATTCTCTACATCGGCCACACCTTAGTG  750

seq1  TCTCTGCAGAGGTTAAGAAACATATCAAAGCTTGGCTAGCCACACCTACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCAGAGGTTAAGAAACATATCAAAGCTTGGCTAGCCACACCTACT  800

seq1  CCTCCATTCTATGCACGTAATTTCCACAGCAATCTGAACAGTGGCCAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATTCTATGCACGTAATTTCCACAGCAATCTGAACAGTGGCCAGGA  850

seq1  TTAGTCTTCCCAGTCTCTTCTAGATATGTGGGCTAAAGTTTCC-TTTCAT  899
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTAGTCTTCCCAGTCTCTTCTAGATATGTGGGCTAAAGTTTCCTTTTCAT  900

seq1  TCATAGCACAAAGATGCTTGCTGGTACAGAAAAGTGTTTGAAAGAGAGTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGCACAAAGATGCTTGCTGGTACAGAAAAGTGTTTGAAAGAGAGTG  950

seq1  CATGGGGCAGCTAGTTCAC-TCTGTAGCCAGTGATGCTGGGAGGTGGTAG  998
      ||||||||||||||||| | |||||||||||||||||||||||   ||||
seq2  CATGGGGCAGCTAGTTCCCTTCTGTAGCCAGTGATGCTGGGAG--TGTAG  998

seq1  CTCTTTTTTCTTCTATTATTATTAATCATTCCATTCATTTACATCTCAAA  1048
      ||| |||||||| ||||| || |||||| |||||||| ||||||||| ||
seq2  CTC-TTTTTCTT-TATTA-TAATAATCA-TCCATTCA-TTACATCTC-AA  1042

seq1  TGATATCCCATTTCC  1063
      |||||| ||||||||
seq2  TGATAT-CCATTTCC  1056

seq1: chr8_13964673_13965735
seq2: B6Ng01-133I17.g_67_1130 (reverse)

seq1  GCCTCCA-CCCCCACCCCATCGCCTGCC-GCCAA--GGCAGGGCCAGCAC  46
      ||||||| |||||||||||||| ||||| |||||  | ||||||||||| 
seq2  GCCTCCACCCCCCACCCCATCG-CTGCCGGCCAAAGGCCAGGGCCAGCAA  49

seq1  TGAAGGCTCTGTAGCTTCTAGTGACAGTAAATATCATTCTGCAATGAAAA  96
      |  ||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTGAGGCTCTGTAGCTTCTAGTGACAGTAAATATCAATCTGCAATGAAAA  99

seq1  CATTACGTAAATAGGTCTGGCTGATCTCACTAAAAGATAAAACAAGACAG  146
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CA-TACGTAAATAGGTCTGGCTGATCTCACTAAAAGATAAAACAAGACAG  148

seq1  GAAAAGGATCCAGATTGAAACTGCTGGGGGAGGCGGGGTCACGTGAACTG  196
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  G-AAAGGATCCAGATTGAAACTGCTGGGGGAGGCGGGGTCACGTGAACTG  197

seq1  AAGGACGCACCCGAGGTGCCTGGTAAAGTGGACATGAGCGACAACCCAGG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACGCACCCGAGGTGCCTGGTAAAGTGGACATGAGCGACAACCCAGG  247

seq1  AACCTATAAGTAGACCCACACTGGGAGAGCAGCTCTGGGGACCCAAAGTG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTATAAGTAGACCCACACTGGGAGAGCAGCTCTGGGGACCCAAAGTG  297

seq1  CCTGGACAGCAGAGATCCTCAGGCAACAGTACCAACATGGGCAAGAAGGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGACAGCAGAGATCCTCAGGCAACAGTACCAACATGGGCAAGAAGGA  347

seq1  AAAGGGCATGCTCCCCACAGGCTGGAGCTCCAGTTCCTCTGGGCCAACTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGCATGCTCCCCACAGGCTGGAGCTCCAGTTCCTCTGGGCCAACTT  397

seq1  CCTGCGGTTTTGACAAGGATAGCTGTCTTGAAACGCGAGTGCCAGAACTG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCGGTTTTGACAAGGATAGCTGTCTTGAAACGCGAGTGCCAGAACTG  447

seq1  ACTGGCCAGTGGGGCTAGCCTCTCTGTAGCTCTTCTTCCTAGAGTTTTGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCCAGTGGGGCTAGCCTCTCTGTAGCTCTTCTTCCTAGAGTTTTGA  497

seq1  CACTTTTGCCTGAGACTGCACGGAGGGCAGGACTTATTTTTAGCTTTCCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTGCCTGAGACTGCACGGAGGGCAGGACTTATTTTTAGCTTTCCT  547

seq1  TCCTTGACACGTGTGATTTATCCACGCAGTCGGGGGGAATGGTTCACTTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGACACGTGTGATTTATCCACGCAGTCGGGGGGAATGGTTCACTTG  597

seq1  CCATTTCACCTTTGCAGGATCTTCTTTCCTCCTGCTATAAAACACCACTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCACCTTTGCAGGATCTTCTTTCCTCCTGCTATAAAACACCACTC  647

seq1  ATGTTCTTGGCTCAGACCCCAGGTCTTGAGCGAGCGGCACTGGTCTTCCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTTGGCTCAGACCCCAGGTCTTGAGCGAGCGGCACTGGTCTTCCT  697

seq1  GTTCTAGGCAAAGCCAATCTCCATCCCACTCTAAGGGTGCCCAGGCAGGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAGGCAAAGCCAATCTCCATCCCACTCTAAGGGTGCCCAGGCAGGA  747

seq1  AGTGGGAAGGAAGAGAATTTAGAGTTGCAAACAGAAGGAGAACAGGGCGC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGAAGGAAGAGAATTTAGAGTTGCAAACAGAAGGAGAACAGGGCGC  797

seq1  AAGGGACTCACCATCCACCTCAAACTGCAGAAACAACATATACGCTGTCC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGACTCACCATCCACCTCAAACTGCAGAAACAACATATACGCTGTCC  847

seq1  CTCTCTGAGATTCCATATGCAATATCAAGGCAGTGTAATATTAAGCCAGT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGAGATTCCATATGCAATATCAAGGCAGTGTAATATTAAGCCAGT  897

seq1  CCAGGACACAAACAAATAGCCTGCCCTCTCACCCCTAAAAATGTAAAGTC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACACAAACAAATAGCCTGCCCTCTCACCCCTAAAAATGTAAAGTC  947

seq1  TACTGTCAGATAGGAAACTAGGAATCAATTACACTAAAATTAATTTTAAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTCAGATAGGAAACTAGGAATCAATTACACTAAAATTAATTTTAAG  997

seq1  TATTTGCAACCGCAATATTATAACAAGTTAGAACAGGAACCTAATTGTGC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGCAACCGCAATATTATAACAAGTTAGAACAGGAACCTAATTGTGC  1047

seq1  TGCATGTCAAAGAATTC  1063
      |||||||||||||||||
seq2  TGCATGTCAAAGAATTC  1064