BAC Information

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BAC

Clone NameB6Ng01-133L20
Chromosome8 (Build37)
Map Location 101,154,815 - 101,155,953
singlet/doubletsinglet
Overlap genenone
Upstream geneEG384885, LOC100041173, EG636915
Downstream geneCdh8, A330008L17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133L20.bB6Ng01-133L20.g
ACCDH934210DH934211
length1,1261,162
definitionDH934210|Mus musculus domesticus DNA, BAC clone: B6Ng01-133L20, 5' end.DH934211|Mus musculus domesticus DNA, BAC clone: B6Ng01-133L20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctcacaggaataggaagaataatgaaattgattttgaggtcc
agtatggttgttccttaagaaaacaccctattatatttaattcctaattc
ctatcttctctctctctctctctctctctctctcgctctcgctctcgctc
tctctctctttgtctgtgaaacagtcacaattatcaggtcaccttttgat
ttagtatattactcctggggagctggttcctcctgttcaaagatcaaaca
tgggtgatagaagcatctattttcagagtgatttaacttaggacacacac
acacacaattatttttttttgaaggataaatggataaaagatttcctaat
ttgggctttaataacacaagatacttagtgtatataacatagacatgact
tccaagttctagatgctcaagttactgtcatggtttagcaaaattaaatt
ggggaagagctttatctcaggtattcagtgagagagagaaaacgtatagt
tggtttattcatagtgattactccatcctcatgaattcatttcaatccaa
tattcaaaggttgcatctcttagtacttcccaaaactatctctgtatgat
atgtctaagcacatgaaatttaaggggatagaaacagagtccatactaat
gaatgagtagtcagcatgttatgctgagagactctgattgctaaaaaaac
tttactatgaatattcaaggcctcttccatgaccacgggaacaaagaagt
gtgttgttggtgcagtaagtctctatctgtgcacacatgatattaataat
atgatataaaaataaccatcaggtagaaagttacaattaactataaagaa
ttcttttgtgtataaccatttaccttataaacaccttgtacaatgctgtc
atttccacagaaagccctctaagaagagctgtaaatgtaagccatttaca
gctattacgttgacctgatttggaaactcaagtcatgaaaatatatgagc
ttactacacttatttattcacatattatttttgtaattttagagattgac
agtgtttctactggaatatggagaacagctagagtgcaatcatatacttc
tttatgttctttagggctgtttgacc
gaattctcacctgaggaatactgaatggctgaaaagcacctaaaatatgt
taaacatccttaatcatcagggaaatgcaaatcaaaacaaccatgagatt
ccacctcacaccagtcagaatggctaagttcaaaaattcaggtgacagca
catgctctcgaggatgtggagaaagaggaacactcctcctttgttggtgg
gattgcaagcttgtacaaccactctggaaatcagtctggcggttcctcag
aaaattggacatagtactgccagaggatccggctatacctctcctggaca
tatattcagaagatgttccacctggtaagaaagacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
agtactactcagctattaaaaagaatgaatttttgaaatttctaggcaaa
tggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaaa
gaactcacatgatatgtactcactgataagtggatattatcccagaaact
taaaatacccaacatataagatacaatttaggaaacacatgaaactcaag
aagaatgaagaccaaagtgtggacactttgccccttcttgtaattgggaa
caaaacacccatggaaggatttacagagacaaagtttggagccgaggcaa
aaggatggaccatctagagactgccacatctggggatccatcccataatc
ctcctccaaacgctgacaccattgcatacactagcaagattttgctgaaa
ggatcctgatatagctgtctcttgtgagactttggtggggcctagcaaac
acagaagtggatgctcacagtcagctattggatggatcacagggtcccca
atggaggagctagagaaagtacccaagaactaaagggattcgcactctat
agtggacacatatgactaaccagtacccctagagctcatgtctgtactgc
atacataatcagaagatgctagtcgcatcagtggcagagaggtccattgt
ctcaactttattgcctcagtactggggaacgccagggccagaattggaga
gtgggtggtgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_101154815_101155953
seq2: B6Ng01-133L20.b_46_1171

seq1  GAATTCTCCTCACAGGAATAGGAAGAATAATGAAATTGATTTTGAGGTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTCACAGGAATAGGAAGAATAATGAAATTGATTTTGAGGTCC  50

seq1  AGTATGGTTGTTCCTTAAGAAAACACCCTATTATATTTAATTCCTAATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGGTTGTTCCTTAAGAAAACACCCTATTATATTTAATTCCTAATTC  100

seq1  CTATCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTCTCGCTCTCGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTCTCGCTCTCGCTC  150

seq1  TCTCTCTCTTTGTCTGTGAAACAGTCACAATTATCAGGTCACCTTTTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTTTGTCTGTGAAACAGTCACAATTATCAGGTCACCTTTTGAT  200

seq1  TTAGTATATTACTCCTGGGGAGCTGGTTCCTCCTGTTCAAAGATCAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTATATTACTCCTGGGGAGCTGGTTCCTCCTGTTCAAAGATCAAACA  250

seq1  TGGGTGATAGAAGCATCTATTTTCAGAGTGATTTAACTTAGGACACACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGATAGAAGCATCTATTTTCAGAGTGATTTAACTTAGGACACACAC  300

seq1  ACACACAATTATTTTTTTTTGAAGGATAAATGGATAAAAGATTTCCTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACAATTATTTTTTTTTGAAGGATAAATGGATAAAAGATTTCCTAAT  350

seq1  TTGGGCTTTAATAACACAAGATACTTAGTGTATATAACATAGACATGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCTTTAATAACACAAGATACTTAGTGTATATAACATAGACATGACT  400

seq1  TCCAAGTTCTAGATGCTCAAGTTACTGTCATGGTTTAGCAAAATTAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGTTCTAGATGCTCAAGTTACTGTCATGGTTTAGCAAAATTAAATT  450

seq1  GGGGAAGAGCTTTATCTCAGGTATTCAGTGAGAGAGAGAAAACGTATAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAGAGCTTTATCTCAGGTATTCAGTGAGAGAGAGAAAACGTATAGT  500

seq1  TGGTTTATTCATAGTGATTACTCCATCCTCATGAATTCATTTCAATCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTATTCATAGTGATTACTCCATCCTCATGAATTCATTTCAATCCAA  550

seq1  TATTCAAAGGTTGCATCTCTTAGTACTTCCCAAAACTATCTCTGTATGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAAAGGTTGCATCTCTTAGTACTTCCCAAAACTATCTCTGTATGAT  600

seq1  ATGTCTAAGCACATGAAATTTAAGGGGATAGAAACAGAGTCCATACTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTAAGCACATGAAATTTAAGGGGATAGAAACAGAGTCCATACTAAT  650

seq1  GAATGAGTAGTCAGCATGTTATGCTGAGAGACTCTGATTGCT-AAAAAAC  699
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GAATGAGTAGTCAGCATGTTATGCTGAGAGACTCTGATTGCTAAAAAAAC  700

seq1  TTTACTATGAATATTCAAGGCCTCTTCCATGACCACGGGAACAAAGAAGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTATGAATATTCAAGGCCTCTTCCATGACCACGGGAACAAAGAAGT  750

seq1  GTGTTGTTGGTGCAGTAAGTCTCTATCTGTGCACACATGATATTAATAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGTTGGTGCAGTAAGTCTCTATCTGTGCACACATGATATTAATAAT  800

seq1  ATGATATAAAAATAACCATCAGGTAGAAAGTTACAATTAACTATAAAGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATAAAAATAACCATCAGGTAGAAAGTTACAATTAACTATAAAGAA  850

seq1  TTCTTTTGTGTATAACCATTTACCTTATAAACACCTTGTACAATGCTGTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTGTGTATAACCATTTACCTTATAAACACCTTGTACAATGCTGTC  900

seq1  ATTTCCACAGAAAGCCCTCTAAGAAGAGCTGTAAATGTAAGGCCATTTAC  949
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATTTCCACAGAAAGCCCTCTAAGAAGAGCTGTAAATGTAA-GCCATTTAC  949

seq1  AGCTATTACGTTGACCTGATTTGGAAACTCAAGTCATGAAAATATATGAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGCTATTACGTTGACCTGATTTGGAAACTCAAGTCATGAAAATATATGA-  998

seq1  GCTTACTACCACTTATTTTATTCAACATATTA-TTTTGTAATTTTTAGAG  1048
      |||||||| |||||| ||||||| |||||||| |||||||| ||||||||
seq2  GCTTACTA-CACTTA-TTTATTC-ACATATTATTTTTGTAA-TTTTAGAG  1044

seq1  ATTTGACAGTGTTTCCTACCTGGGAATAT-GAGAACAGCTTAAGAGTGCA  1097
      | |||||||||||| ||||   ||||||| ||||||||||  ||||||| 
seq2  A-TTGACAGTGTTT-CTAC--TGGAATATGGAGAACAGCT--AGAGTGC-  1087

seq1  AATCATATACTTC-TTATGTTCTTTAAGGGGCTTGTTTTGACC  1139
      ||||||||||||| ||||||||||||  |||||   |||||||
seq2  AATCATATACTTCTTTATGTTCTTTA--GGGCT--GTTTGACC  1126