BAC Information

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BAC

Clone NameB6Ng01-134E17
Chromosome8 (Build37)
Map Location 73,014,882 - 73,124,522
singlet/doubletdoublet
Overlap geneCrlf1, 2810428I15Rik, Uba52, Fkbp8, Ell, Isyna1, Ssbp4
Upstream geneEG665578, LOC622336, LOC100041482, LOC673968, AI449175, EG636741, 1200003I07Rik, D330038O06Rik, Atp13a1, Gmip, Edg4, Pbx4, Cilp2, BC028663, Ndufa13, Tssk6, Gatad2a, LOC665649, 9130404D08Rik, Sf4, Tm6sf2, Hapln4, Ncan, Rfxank, 2310073E15Rik, 2310045N01Rik, Mef2b, Tmem161a, Slc25a42, Armc6, Sfrs14, Homer3, Ddx49, Cope, Lass1, Upf1, Comp, Crtc1, Klhl26, Tmem59l
Downstream geneLrrc25, Gdf15, Pgpep1, Lsm4, Jund1, 2410018E23Rik, LOC100041434, Pde4c, Rab3a, BC051227, Ifi30, Pik3r2, LOC100041971, Mast3, Il12rb1, Arrdc2, Kcnn1, LOC100042011, Ccdc124, Slc5a5, Rpl18a, Snora68, Mtap1s, LOC100042057, LOC665858, LOC384645, LOC100041583, EG621377, 2410004L22Rik, Myo9b, 2010315L10Rik, Ocel1, Nr2f6, Ushbp1, 5430437P03Rik, Ankrd41, Abhd8, Mrpl34, 1500034J01Rik, Tmem16h, Gtpbp3, Plvap, LOC665928, Bst2, 1110012M11Rik, BC033932, Txnl6, Slc27a1, Pgls, Bcnp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134E17.bB6Ng01-134E17.g
ACCDH934629DH934630
length1,007979
definitionDH934629|Mus musculus domesticus DNA, BAC clone: B6Ng01-134E17, 5' end.DH934630|Mus musculus domesticus DNA, BAC clone: B6Ng01-134E17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,123,512 - 73,124,522)(73,014,882 - 73,015,869)
sequence
gaattctgggggtgtggctactgctgaccctccttcagcctcccctttct
ctggtccagattgacattccagcttgaccacatgacagctgtcccttgct
gtggctcttgtcccaccctctgtgtctcgttcttgcagagcgcagcagca
gctcccagccctgtgatgggtgccatgaccccaaacgatgcaatggcagc
aggccctgtggcaccaggcttcttccaggtatgggtgcctggggcttcct
ctgttcccagagttgaggtcggggtatgctgcaggctcgtcttcagtgga
agactgtcaccacagtgggtgtgaagatgtgtgcaccttgtcattgccag
tgacaggcatgaatctatgcccctgagtattagttaccattaatgccatc
ccctggcaacaggctgtgcccctgttcccctcccaggttgagcttcatag
cttttcccacctatcctcccgaacaagatgtgtagccccagtggtggacc
tcacagccaggtagtgggcttcacccgagctggcaccatgacgtgctccc
tccttttacagctgtgccagctgactgtggtctgcagtctggatctgcag
caggggactagcaaggttggaggccctggtcccccactctactcccaggg
atagtaagaacagggtttctttagggcaagtacaagatgaaggttattta
ttgattgccacccacctcttccagcccttcatgtcaccacggtttccaag
ggggtgcccgcccaatcctaaggatgccaggccaggtgagagagggccgg
ccgcggtgtgaggagcagtggttttgggggatgtctcttcccactcatta
ctgtgcctgctccacagcctcctgtgggcctcctggctcccagcccttat
ccccgctgcctggacccctccccacgagtgcagggtgaataggatgcatc
cagctgctggtccacagctctgcccctcatgggtgtgccctagcctgatc
cctcttt
gaattcacaaaaggcgcgagggaagttttccccgaagccacaggcaaaga
aggaaggctcctgaaaacaacgagcccaaacagccagcgagctggagagg
ggagcatctggtatgggcacgggtggcaaggcagagttgggtctcatttc
tttcaaagtccctctgcctgtgacgaaaacaaagactgaaggaagacgga
aggaaccccagaggagggcctgcaacatcccgggaggcggaaggagccca
gaggagggcctgcaacatcccgggaagaggatgaggggcctggaccagga
gaggggtgtgtcagaagctcaggatgggggtgtgttttggaaccagggcc
aaccggattgctgatggattgtacgtatgggaagaaggggaaagcattca
gtcacgcagctcccaggtcgttgcctgcagcacctgggtgcataggggaa
gttagccctttccacccgggactgggaggaggagcattcgggaacaagta
aaataaagatctttgctccaaaagcctcccaggagtcgagattcctacct
ctctacctatatggagaccggagcgaataggcgttgtgggggaggggcgg
caatggtcctggaaatgtagccaagacccaggtctccacagagccttagg
ccacctggccacatttctcagaggagacctgcaagccagtgccacctctg
catcccaccgtgctaatcaggttttaagtttggggggattttctttcccg
tactttgattctttacacgtaaacttttagttggtcccagattagccact
gtacaaagaagaaacttgagcacaagtggcctagtttgccccagcaaatg
gcagtggcgaattagtttttaattctcctctttgtcattggagcttcttg
gaggacttttaggaagggctgagcctcaaggtaacggctgtatgggagga
atcgagcctttactcttagggagctgtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_73123512_73124522
seq2: B6Ng01-134E17.b_50_1056 (reverse)

seq1  AAAGAGGGCTCAGGCTAGGGCACACCCATGAGGGGCGAGTGCTGTGGACC  50
      |||||||| ||||||||||||||||||||||||||| || ||||||||||
seq2  AAAGAGGGATCAGGCTAGGGCACACCCATGAGGGGC-AGAGCTGTGGACC  49

seq1  AGCAGCTGGAGTGCATCCTACTCACCCTGCACTCGTGGGGAGGGGTCCAT  100
      |||||||||| ||||||||| |||||||||||||||||||||||||||| 
seq2  AGCAGCTGGA-TGCATCCTATTCACCCTGCACTCGTGGGGAGGGGTCCA-  97

seq1  GGCAGCGGGGATGAGGGGCTGGGAGCCAGGGAGGCCCACAGGAGGCTGTG  150
      |||||||||||| | ||||||||||||| |||||||||||||||||||||
seq2  GGCAGCGGGGAT-AAGGGCTGGGAGCCA-GGAGGCCCACAGGAGGCTGTG  145

seq1  GAGCAGGCACAGTACTGAGTTGGGAGAGACATCCCCCAAAACCACTGCTC  200
      |||||||||||||| ||||| || ||||||||||||||||||||||||||
seq2  GAGCAGGCACAGTAATGAGTGGGAAGAGACATCCCCCAAAACCACTGCTC  195

seq1  CTCCCACCGCGGCCGGCCCTCTATCACCTGGCCTGGCATCCTTAGGATTG  250
      ||| |||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTCACACCGCGGCCGGCCCTCTCTCACCTGGCCTGGCATCCTTAGGATTG  245

seq1  GGCGGGCACCCCC-TGGGAACCGTGGTGACATGAAGGGCTGGAAGAGGTG  299
      ||||||||||||| ||| ||||||||||||||||||||||||||||||||
seq2  GGCGGGCACCCCCTTGGAAACCGTGGTGACATGAAGGGCTGGAAGAGGTG  295

seq1  GGTGGCAATCAATAAATAACCTTCATCTTGTACTTGCCCTAAAGAAACCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCAATCAATAAATAACCTTCATCTTGTACTTGCCCTAAAGAAACCC  345

seq1  TGTTCTTACTATCCCTGGGAGTAGAGTGGGGGACCAGGGCCTCCAACCTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTACTATCCCTGGGAGTAGAGTGGGGGACCAGGGCCTCCAACCTT  395

seq1  GCTAGTCCCCTGCTGCAGATCCAGACTGCAGACCACAGTCAGCTGGCACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTCCCCTGCTGCAGATCCAGACTGCAGACCACAGTCAGCTGGCACA  445

seq1  GCTGTAAAAGGAGGGAGCACGTCATGGTGCCAGCTCGGGTGAAGCCCACT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAAAAGGAGGGAGCACGTCATGGTGCCAGCTCGGGTGAAGCCCACT  495

seq1  ACCTGGCTGTGAGGTCCACCACTGGGGCTACACATCTTGTTCGGGAGGAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGCTGTGAGGTCCACCACTGGGGCTACACATCTTGTTCGGGAGGAT  545

seq1  AGGTGGGAAAAGCTATGAAGCTCAACCTGGGAGGGGAACAGGGGCACAGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGGAAAAGCTATGAAGCTCAACCTGGGAGGGGAACAGGGGCACAGC  595

seq1  CTGTTGCCAGGGGATGGCATTAATGGTAACTAATACTCAGGGGCATAGAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGCCAGGGGATGGCATTAATGGTAACTAATACTCAGGGGCATAGAT  645

seq1  TCATGCCTGTCACTGGCAATGACAAGGTGCACACATCTTCACACCCACTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCCTGTCACTGGCAATGACAAGGTGCACACATCTTCACACCCACTG  695

seq1  TGGTGACAGTCTTCCACTGAAGACGAGCCTGCAGCATACCCCGACCTCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGACAGTCTTCCACTGAAGACGAGCCTGCAGCATACCCCGACCTCAA  745

seq1  CTCTGGGAACAGAGGAAGCCCCAGGCACCCATACCTGGAAGAAGCCTGGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGAACAGAGGAAGCCCCAGGCACCCATACCTGGAAGAAGCCTGGT  795

seq1  GCCACAGGGCCTGCTGCCATTGCATCGTTTGGGGTCATGGCACCCATCAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAGGGCCTGCTGCCATTGCATCGTTTGGGGTCATGGCACCCATCAC  845

seq1  AGGGCTGGGAGCTGCTGCTGCGCTCTGCAAGAACGAGACACAGAGGGTGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTGGGAGCTGCTGCTGCGCTCTGCAAGAACGAGACACAGAGGGTGG  895

seq1  GACAAGAGCCACAGCAAGGGACAGCTGTCATGTGGTCAAGCTGGAATGTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGAGCCACAGCAAGGGACAGCTGTCATGTGGTCAAGCTGGAATGTC  945

seq1  AATCTGGACCAGAGAAAGGGGAGGCTGAAGGAGGGTCAGCAGTAGCCACA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGGACCAGAGAAAGGGGAGGCTGAAGGAGGGTCAGCAGTAGCCACA  995

seq1  CCCCCAGAATTC  1011
      ||||||||||||
seq2  CCCCCAGAATTC  1007

seq1: chr8_73014882_73015869
seq2: B6Ng01-134E17.g_67_1045

seq1  GAATTCACAAAAGGCGCGAGGGAAGTTTTCCCCGAAGCCACAGGCAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAAAAGGCGCGAGGGAAGTTTTCCCCGAAGCCACAGGCAAAGA  50

seq1  AGGAAGGCTCCTGAAAACAACGAGCCCAAACAGCCAGCGAGCTGGAGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGCTCCTGAAAACAACGAGCCCAAACAGCCAGCGAGCTGGAGAGG  100

seq1  GGAGCATCTGGTATGGGCACGGGTGGCAAGGCAGAGTTGGGTCTCATTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCATCTGGTATGGGCACGGGTGGCAAGGCAGAGTTGGGTCTCATTTC  150

seq1  TTTCAAAGTCCCTCTGCCTGTGACGAAAACAAAGACTGAAGGAAGACGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAGTCCCTCTGCCTGTGACGAAAACAAAGACTGAAGGAAGACGGA  200

seq1  AGGAACCCCAGAGGAGGGCCTGCAACATCCCGGGAGGCGGAAGGAGCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACCCCAGAGGAGGGCCTGCAACATCCCGGGAGGCGGAAGGAGCCCA  250

seq1  GAGGAGGGCCTGCAACATCCCGGGAAGAGGATGAGGGGCCTGGACCAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGGCCTGCAACATCCCGGGAAGAGGATGAGGGGCCTGGACCAGGA  300

seq1  GAGGGGTGTGTCAGAAGCTCAGGATGGGGGTGTGTTTTGGAACCAGGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGTGTGTCAGAAGCTCAGGATGGGGGTGTGTTTTGGAACCAGGGCC  350

seq1  AACCGGATTGCTGATGGATTGTACGTATGGGAAGAAGGGGAAAGCATTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGGATTGCTGATGGATTGTACGTATGGGAAGAAGGGGAAAGCATTCA  400

seq1  GTCACGCAGCTCCCAGGTCGTTGCCTGCAGCACCTGGGTGCATAGGGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACGCAGCTCCCAGGTCGTTGCCTGCAGCACCTGGGTGCATAGGGGAA  450

seq1  GTTAGCCCTTTCCACCCGGGACTGGGAGGAGGAGCATTCGGGAACAAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGCCCTTTCCACCCGGGACTGGGAGGAGGAGCATTCGGGAACAAGTA  500

seq1  AAATAAAGATCTTTGCTCCAAAAGCCTCCCAGGAGTCGAGATTCCTACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAGATCTTTGCTCCAAAAGCCTCCCAGGAGTCGAGATTCCTACCT  550

seq1  CTCTACCTATATGGAGACCGGAGCGAATAGGCGTTGTGGGGGAGGGGCGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACCTATATGGAGACCGGAGCGAATAGGCGTTGTGGGGGAGGGGCGG  600

seq1  CAATGGTCCTGGAAATGTAGCCAAGACCCAGGTCTCCACAGAGCCTTAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGTCCTGGAAATGTAGCCAAGACCCAGGTCTCCACAGAGCCTTAGG  650

seq1  CCACCTGGCCACATTTCTCAGAGGAGACCTGCAAGCCAGTGCCACCTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGGCCACATTTCTCAGAGGAGACCTGCAAGCCAGTGCCACCTCTG  700

seq1  CATCCCACCGTGCTAATCAGGTTTTAAGTTTGGGGGGATTTTCTTTCCCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCACCGTGCTAATCAGGTTTTAAGTTTGGGGGGATTTTCTTTCCCG  750

seq1  TAC-TTGATTCTTTACACGTAAACTTTTAAGTTGGTCCCAGATTAGCCAC  799
      ||| |||||||||||||||||||||||| |||||||||||||||||||||
seq2  TACTTTGATTCTTTACACGTAAACTTTT-AGTTGGTCCCAGATTAGCCAC  799

seq1  TGTACAAAAGAAGAAACTGAGGCACAAGTGGCCTAGTTTGCCCCCAGCAA  849
      ||||| ||||||||||||   ||||||||||||||||||| ||||||| |
seq2  TGTAC-AAAGAAGAAACTTGAGCACAAGTGGCCTAGTTTG-CCCCAGC-A  846

seq1  AATGGCAGTGGCCGAATTAGTTTTTATTTCTCTCCTTTGTCATTTGAAGC  899
      ||||||||||| |||||||||||||| |||||  |||||||| ||| |||
seq2  AATGGCAGTGG-CGAATTAGTTTTTAATTCTCCTCTTTGTCA-TTGGAGC  894

seq1  TTCTTGGAGGACCTTTAAGGAAGGGGCTGAGCCTCCAAGGGAACGGCTGT  949
      ||||||||||| |||| ||||| ||||||||||| ||||| |||||||||
seq2  TTCTTGGAGGA-CTTTTAGGAA-GGGCTGAGCCT-CAAGGTAACGGCTGT  941

seq1  ATGGGAGAAATCGAGCCCTTTACTCTCAGGGAGCTGTGG  988
      ||||||| ||||||| |||||||||| ||||||||||||
seq2  ATGGGAGGAATCGAG-CCTTTACTCTTAGGGAGCTGTGG  979