BAC Information

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BAC

Clone NameB6Ng01-135G21
Chromosome8 (Build37)
Map Location 30,084,375 - 30,222,165
singlet/doubletdoublet
Overlap geneUnc5d
Upstream geneEG666422, LOC666430, EG666446, LOC100042598
Downstream geneLOC100041237
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-135G21.bB6Ng01-135G21.g
ACCDH935466DH935467
length7711,128
definitionDH935466|Mus musculus domesticus DNA, BAC clone: B6Ng01-135G21, 5' end.DH935467|Mus musculus domesticus DNA, BAC clone: B6Ng01-135G21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,221,395 - 30,222,165)(30,084,375 - 30,085,508)
sequence
gaattcatagtaaaaacagtctagtctgtctctgatgctctcccttctag
taagagtttttattcacaccagttgggttcttatttttgattactgagtt
cagcaaccaagaaacaaatttctcagatgaaaccacctttaagccattgt
ggaatgctaatgctcttgtcgcagttaattctctcagctcttcatcctaa
aggcattagatgtgatacccaggaggttagtgtttgcatggcaggtatga
gaggaagaggccttttagaatgacataccattcattactttgtagctgcc
tctggattgttgtgcaaagaaatagcatgactcccatgaatgttctactg
tgtgggctttcataccgtacacaataccagatttaaggcatgccaaaata
tctagagcagttagtcaaggaagtgatgtatatgttccctaaatggggac
agcacaaaggacacgtgacagcatcttccagaagtcacctgaaggagtag
gtgctgtgttccagagtccccagtttcttaaccttgaccagttttctttc
tgtacccatggtgtcttgtgttgttactcaacaatatagccaagaaaagt
atattattctatgttattatagcaaaatatcggatacaagctatattaaa
tggaaaaaaaaagacagtgactcataatgcccatcattcaagattcaaag
agaattttgtattttcttcagaaagtccttttaggctgcatcataccata
tccggagtgtatgtatctctc
gaattcttcagtcagacattcttgcatacaaataagctgaggtgtcaaat
agggagtcttctggaatgtccattctctactgactggtgctggctaggtc
agagaatacagcattcccaacagggaagtattttgcacaatgcttagcag
atgtatctgtcagagcatgttttcaacataggcacaacaaaatgtcaggc
tgggtgggatcacattcttcttatactgaggtgtgccttacataagtcag
caccattcctgcctgggctccctgcatgatgtacaggtgtgattgttgcc
tttcgatagccattagtccttgtcccacaggtactgaaggaacatgtagg
gaagaggagatgcacaataaaaagattgttattttttaaaaggtttattt
tttttcattttatgtttatgggtgttttgtctgcatgtataattgtacac
cttgtgctcgcagtgggcagagggtatggagctgctgaagagggtggaat
tcctgggaactggagttactgagagttgtgaggtgcatgtgggtgcaggt
atcaaatctagatcatctggaaaaacagtgagtccttctaacctctgagt
tatctctccagccattaatgttttctatattaataaatgagccacattgt
tataagcagcgttgtagaataaaataatttgtacataagaaattcctgaa
agtatccttttgtttccaaaccactttacacagacctctgtcagtgtgca
tttaagttcgttgtaactatttcagtatgcttttctttaatggcattttt
atttatttcctttctgtttatggcttctgcccaggtgtttgctcacaatt
ctgttcaccaactattcaaaatctaagtgattttggatacattctgctgg
aaaatgatgggaaatcaaatttacattagcttctgaattaattacttgcc
cagtacctcatggataatactctaaagacaaggtagggggttaccacaaa
ttggttaccacatactagaagaagctggaaatttctagcactttcccttt
tattcagtgtgacctagaaacgcttggcatatctaaggtttcctagcatg
cctatgcagtcctctctatttttaaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_30221395_30222165
seq2: B6Ng01-135G21.b_49_819 (reverse)

seq1  GAGAGATACATACACTCCGGATATGGTATGATGCAGCCTAAAAGGACTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATACATACACTCCGGATATGGTATGATGCAGCCTAAAAGGACTTT  50

seq1  CTGAAGAAAATACAAAATTCTCTTTGAATCTTGAATGATGGGCATTATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGAAAATACAAAATTCTCTTTGAATCTTGAATGATGGGCATTATGA  100

seq1  GTCACTGTCTTTTTTTTTCCATTTAATATAGCTTGTATCCGATATTTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTGTCTTTTTTTTTCCATTTAATATAGCTTGTATCCGATATTTTGC  150

seq1  TATAATAACATAGAATAATATACTTTTCTTGGCTATATTGTTGAGTAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAACATAGAATAATATACTTTTCTTGGCTATATTGTTGAGTAACA  200

seq1  ACACAAGACACCATGGGTACAGAAAGAAAACTGGTCAAGGTTAAGAAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAGACACCATGGGTACAGAAAGAAAACTGGTCAAGGTTAAGAAACT  250

seq1  GGGGACTCTGGAACACAGCACCTACTCCTTCAGGTGACTTCTGGAAGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACTCTGGAACACAGCACCTACTCCTTCAGGTGACTTCTGGAAGATG  300

seq1  CTGTCACGTGTCCTTTGTGCTGTCCCCATTTAGGGAACATATACATCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCACGTGTCCTTTGTGCTGTCCCCATTTAGGGAACATATACATCACT  350

seq1  TCCTTGACTAACTGCTCTAGATATTTTGGCATGCCTTAAATCTGGTATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGACTAACTGCTCTAGATATTTTGGCATGCCTTAAATCTGGTATTG  400

seq1  TGTACGGTATGAAAGCCCACACAGTAGAACATTCATGGGAGTCATGCTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACGGTATGAAAGCCCACACAGTAGAACATTCATGGGAGTCATGCTAT  450

seq1  TTCTTTGCACAACAATCCAGAGGCAGCTACAAAGTAATGAATGGTATGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGCACAACAATCCAGAGGCAGCTACAAAGTAATGAATGGTATGTC  500

seq1  ATTCTAAAAGGCCTCTTCCTCTCATACCTGCCATGCAAACACTAACCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAAAAGGCCTCTTCCTCTCATACCTGCCATGCAAACACTAACCTCC  550

seq1  TGGGTATCACATCTAATGCCTTTAGGATGAAGAGCTGAGAGAATTAACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTATCACATCTAATGCCTTTAGGATGAAGAGCTGAGAGAATTAACTG  600

seq1  CGACAAGAGCATTAGCATTCCACAATGGCTTAAAGGTGGTTTCATCTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACAAGAGCATTAGCATTCCACAATGGCTTAAAGGTGGTTTCATCTGAG  650

seq1  AAATTTGTTTCTTGGTTGCTGAACTCAGTAATCAAAAATAAGAACCCAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGTTTCTTGGTTGCTGAACTCAGTAATCAAAAATAAGAACCCAAC  700

seq1  TGGTGTGAATAAAAACTCTTACTAGAAGGGAGAGCATCAGAGACAGACTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGAATAAAAACTCTTACTAGAAGGGAGAGCATCAGAGACAGACTA  750

seq1  GACTGTTTTTACTATGAATTC  771
      |||||||||||||||||||||
seq2  GACTGTTTTTACTATGAATTC  771

seq1: chr8_30084375_30085508
seq2: B6Ng01-135G21.g_67_1194

seq1  GAATTCTTCAGTCAGACATTCTTGCATACAAATAAGCTGAGGTGTCAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGTCAGACATTCTTGCATACAAATAAGCTGAGGTGTCAAAT  50

seq1  AGGGAGTCTTCTGGAATGTCCATTCTCTACTGACTGGTGCTGGCTAGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGTCTTCTGGAATGTCCATTCTCTACTGACTGGTGCTGGCTAGGTC  100

seq1  AGAGAATACAGCATTCCCAACAGGGAAGTATTTTGCACAATGCTTAGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATACAGCATTCCCAACAGGGAAGTATTTTGCACAATGCTTAGCAG  150

seq1  ATGTATCTGTCAGAGCATGTTTTCAACATAGGCACAACAAAATGTCAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCTGTCAGAGCATGTTTTCAACATAGGCACAACAAAATGTCAGGC  200

seq1  TGGGTGGGATCACATTCTTCTTATACTGAGGTGTGCCTTACATAAGTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGGATCACATTCTTCTTATACTGAGGTGTGCCTTACATAAGTCAG  250

seq1  CACCATTCCTGCCTGGGCTCCCTGCATGATGTACAGGTGTGATTGTTGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATTCCTGCCTGGGCTCCCTGCATGATGTACAGGTGTGATTGTTGCC  300

seq1  TTTCGATAGCCATTAGTCCTTGTCCCACAGGTACTGAAGGAACATGTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGATAGCCATTAGTCCTTGTCCCACAGGTACTGAAGGAACATGTAGG  350

seq1  GAAGAGGAGATGCACAATAAAAAGATTGTTATTTTTTAAAAGGTTTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGAGATGCACAATAAAAAGATTGTTATTTTTTAAAAGGTTTATTT  400

seq1  TTTTTCATTTTATGTTTATGGGTGTTTTGTCTGCATGTATAATTGTACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATTTTATGTTTATGGGTGTTTTGTCTGCATGTATAATTGTACAC  450

seq1  CTTGTGCTCGCAGTGGGCAGAGGGTATGGAGCTGCTGAAGAGGGTGGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGCTCGCAGTGGGCAGAGGGTATGGAGCTGCTGAAGAGGGTGGAAT  500

seq1  TCCTGGGAACTGGAGTTACTGAGAGTTGTGAGGTGCATGTGGGTGCAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGGAACTGGAGTTACTGAGAGTTGTGAGGTGCATGTGGGTGCAGGT  550

seq1  ATCAAATCTAGATCATCTGGAAAAACAGTGAGTCCTTCTAACCTCTGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATCTAGATCATCTGGAAAAACAGTGAGTCCTTCTAACCTCTGAGT  600

seq1  TATCTCTCCAGCCATTAATGTTTTCTATATTAATAAATGAGCCACATTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTCCAGCCATTAATGTTTTCTATATTAATAAATGAGCCACATTGT  650

seq1  TATAAGCAGCGTTGTAGAATAAAATAATTTGTACATAAGAAATTCCTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGCAGCGTTGTAGAATAAAATAATTTGTACATAAGAAATTCCTGAA  700

seq1  AGTATCCTTTTGTTTCCAAACCACTTTACACAGACCTCTGTCAGTGTGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCCTTTTGTTTCCAAACCACTTTACACAGACCTCTGTCAGTGTGCA  750

seq1  TTTAAGTTCGTTGTAACTATTTCAGTATGCTTTTCTTTAATGGCATTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTTCGTTGTAACTATTTCAGTATGCTTTTCTTTAATGGCATTTTT  800

seq1  ATTTATTTCCTTTCTGTTTATGGCTTCTGCCCAGGTGTTTGCTCACAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTCCTTTCTGTTTATGGCTTCTGCCCAGGTGTTTGCTCACAATT  850

seq1  CTGTTCACCAACTATTCAAAATCTAAGTGATTTTGGATACATTCTGCTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCACCAACTATTCAAAATCTAAGTGATTTTGGATACATTCTGCTGG  900

seq1  AAAATGATGGGAAATCAAAATTTACAATAAGCTTCTGAAATAAATTACTT  950
      |||||||||||||||| |||||||| || |||||||| ||| ||||||||
seq2  AAAATGATGGGAAATC-AAATTTAC-ATTAGCTTCTG-AATTAATTACTT  947

seq1  GCACAGTACCTCATGGATAATACTCTAAAGACAAGGTA-GGGGTTACCAA  999
      || ||||||||||||||||||||||||||||||||||| |||||||||| 
seq2  GCCCAGTACCTCATGGATAATACTCTAAAGACAAGGTAGGGGGTTACCAC  997

seq1  CAATATGGTAACACATACTAGAAG-AGCT-GAAATTTCTAGCATCTTTCC  1047
       |||  | || ||||||||||||| |||| ||||||||||||| ||||||
seq2  AAATTGGTTACCACATACTAGAAGAAGCTGGAAATTTCTAGCA-CTTTCC  1046

seq1  C-TTTATTCTAGTTGTACCTAGAAAACGCTTTGGCATATACCTAAAGTTC  1096
      | ||||||| |||   |||||| |||||| |||||||||  |||| ||| 
seq2  CTTTTATTC-AGTGTGACCTAG-AAACGC-TTGGCATAT--CTAAGGTT-  1090

seq1  TCCTAGCATTGC-ATGCAGTCTGCTTCTATTTATAAGGC  1134
      |||||||||  | ||||||||  | ||||||| ||||||
seq2  TCCTAGCATGCCTATGCAGTCCTC-TCTATTTTTAAGGC  1128