BAC Information

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BAC

Clone NameB6Ng01-135J23
Chromosome8 (Build37)10 (Build37)
Map Location 67,933,761 - 67,934,05369,483,211 - 69,484,300
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneCpe, Sc4mol, Klhl2, LOC100040903, LOC619647, 3110005G23Rik, Trim75, Trim60, LOC665388, LOC665396, LOC100040949, LOC665405, Vaultrc-ps1
Downstream geneLOC100040967, March1, LOC100040986
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-135J23.bB6Ng01-135J23.g
ACCDH935613DH935614
length3631,091
definitionDH935613|Mus musculus domesticus DNA, BAC clone: B6Ng01-135J23, 5' end.DH935614|Mus musculus domesticus DNA, BAC clone: B6Ng01-135J23, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(67,933,761 - 67,934,053)(69,483,211 - 69,484,300)
sequence
catggatacctgtgtctagaaagtcaacatttaatgcacagcagcaagaa
ttgtttacagtggggcctagcaaacacagaagtggatgctcacagtcagc
tattggatggatcacagggcccccaatggaggagctagagaaagtaccca
aggagctaaagagaactgcaaccctataggtggaacaacattatgaacta
accagtaccctggagctcttgactctagctgcatatgtatcaaaagatgg
cctagtaggccatcactggaaagagaggcccattggacttgcaaacttta
tatgccccagtacaggggaacgccagggccaaaaagtgggagtgggtggg
taggggagtgcgg
gaattccatacatgttgattagagaaggaagtctacgtagatacagattc
aggagcagcaaaagataatttgctatcctgtgtcatcttagttagggttt
tactgctgtgaacagacaccatgaccaaggcaactctttttttttttttt
ttttttttttggtttttcgagacagggtttctctgtatagccctggctct
cctggtaccaaggcaactcttataaggacaacatttaattgggacgggac
tggcttgcaggttcagagattcagtccattatcatcaaagtgggagcatg
gcagaacccaggcaggcattgtgcaggaggagctgaaagttctacctctt
gttccaaaggcaaacaagacaagtctggctcccatgtggttaagagtggg
gtctcagagcccactcgcacagtgacacactttttctaacaagaccacac
ctcccaatagtaccactccctgggttaaacatttaaaccaccacatgtgt
atacctgatgaggtatgcagtctttattttcagagtagggctagaggtaa
acactggcagcatcaaagtcttagaaacgaatgtctagatttactcttga
tctataaaacccctccagatgtctgtgtacacattaagctttgggaagca
tgctcccaggacccatcgttggcactgtggcttgatcgaacgctagaact
aactagagagttggcgtgggagtggttgctggttttcatcactggcccct
gtgggcgtggcgtggactggacactggggctcattaagtcatattgtaca
gccataaagttttgagaaccaggagaggaatgtgactccagtagatgtga
gagataaatcctccagtgtgtactgggctcagaacaaaacaaaaaagcaa
acaaacaaacctgagtacttccatgggactcctaaatggctctcagtcag
caactgagcctttgctagatctgggccggttttgtaagtatcatttacat
gtttccttaaagtggacgatgattcagatcagagtatctggggaatattc
tttctaacctcccattttttaattcagaagggctcgcctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_67933761_67934053
seq2: B6Ng01-135J23.b_123_415

seq1  CAAACACAGAAGTGGATGCTCACAGTCAGCTAATGGATGGATCACAGGGC  50
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CAAACACAGAAGTGGATGCTCACAGTCAGCTATTGGATGGATCACAGGGC  50

seq1  TCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTTCA  100
       |||||||||||||||||||||||||||||||||||||||| || || ||
seq2  CCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGAGAACTGCA  100

seq1  ACCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCCTGAGCTCTT  150
      ||||||||||||||||||||||||||||||||||||||||  ||||||||
seq2  ACCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCTGGAGCTCTT  150

seq1  GACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGA  200
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTAGGCCATCACTGGA  200

seq1  AAGAGAGGCCCATTGGACACGCAGACTTTGTGTGCCCCGGTACAGGGGAA  250
      ||||||||||||||||||  ||| ||||| | |||||| |||||||||||
seq2  AAGAGAGGCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAA  250

seq1  CGCCAGGGCCAAAGGGGGGGAGTGGGAGGGTAGGGGAGTGGGG  293
      |||||||||||||  | ||||||||| ||||||||||||| ||
seq2  CGCCAGGGCCAAAAAGTGGGAGTGGGTGGGTAGGGGAGTGCGG  293

seq1: chr10_69483211_69484300
seq2: B6Ng01-135J23.g_68_1158

seq1  GAATTCCATACATGTTGATTAGAGAAGGAAGTCTACGTAGATACAGATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATACATGTTGATTAGAGAAGGAAGTCTACGTAGATACAGATTC  50

seq1  AGGAGCAGCAAAAGATAATTTGCTATCCTGTGTCATCTTAGTTAGGGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCAGCAAAAGATAATTTGCTATCCTGTGTCATCTTAGTTAGGGTTT  100

seq1  TACTGCTGTGAACAGACACCATGACCAAGGCAACTCTTTTTTTTTTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTGTGAACAGACACCATGACCAAGGCAACTCTTTTTTTTTTTTTT  150

seq1  TTTTTTTTTTGGTTTTTCGAGACAGGGTTTCTCTGTATAGCCCTGGCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTGGTTTTTCGAGACAGGGTTTCTCTGTATAGCCCTGGCTCT  200

seq1  CCTGGTACCAAGGCAACTCTTATAAGGACAACATTTAATTGGGACGGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTACCAAGGCAACTCTTATAAGGACAACATTTAATTGGGACGGGAC  250

seq1  TGGCTTGCAGGTTCAGAGATTCAGTCCATTATCATCAAAGTGGGAGCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGCAGGTTCAGAGATTCAGTCCATTATCATCAAAGTGGGAGCATG  300

seq1  GCAGAACCCAGGCAGGCATTGTGCAGGAGGAGCTGAGAGTTCTACCTCTT  350
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GCAGAACCCAGGCAGGCATTGTGCAGGAGGAGCTGAAAGTTCTACCTCTT  350

seq1  GTTCCAAAGGCAAACAAGACAAGTCTGGCTCCCATGTGGTTAAGAGTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAAAGGCAAACAAGACAAGTCTGGCTCCCATGTGGTTAAGAGTGGG  400

seq1  GTCTCAGAGCCCACTCGCACAGTGACACACTTTTTCTAACAAGACCACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGAGCCCACTCGCACAGTGACACACTTTTTCTAACAAGACCACAC  450

seq1  CTCCCAATAGTACCACTCCCTGGGTTAAACATTTAAACCACCACATGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAATAGTACCACTCCCTGGGTTAAACATTTAAACCACCACATGTGT  500

seq1  ATACCTGATGAGGTATGCAGTCTTTATTTTCAGAGTAGGGCTAGAGGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTGATGAGGTATGCAGTCTTTATTTTCAGAGTAGGGCTAGAGGTAA  550

seq1  ACACTGGCAGCATCAAAGTCTTAGAAACGAATGTCTAGATTTACTCTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGGCAGCATCAAAGTCTTAGAAACGAATGTCTAGATTTACTCTTGA  600

seq1  TCTATAAAACCCCTCCAGATGTCTGTGTACACATTAAGCTTTGGGAAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAAAACCCCTCCAGATGTCTGTGTACACATTAAGCTTTGGGAAGCA  650

seq1  TGCTCCCAGGACCCATCGTTGGCACTGTGGCTTGATCGAACGCTAGAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCCAGGACCCATCGTTGGCACTGTGGCTTGATCGAACGCTAGAACT  700

seq1  AACTAGAGAGTTGGCGTGGGAGTGGTTGCTGGTTTTCATCACTGGCCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGAGAGTTGGCGTGGGAGTGGTTGCTGGTTTTCATCACTGGCCCCT  750

seq1  GTGGGCGTGGCGTGGACTGGACACTGGGGCTCATTAAGTCATATTGTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCGTGGCGTGGACTGGACACTGGGGCTCATTAAGTCATATTGTACA  800

seq1  GCCATAAAG-TTTGAGAACCAGGAGA-GAATGTGACTCCAGTAGATGTGA  848
      ||||||||| |||||||||||||||| |||||||||||||||||||||||
seq2  GCCATAAAGTTTTGAGAACCAGGAGAGGAATGTGACTCCAGTAGATGTGA  850

seq1  GAGATAAATCCTCCAGTGTGTACTGGGCTCAGAACAAAAC-AAAAAGCAA  897
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAGATAAATCCTCCAGTGTGTACTGGGCTCAGAACAAAACAAAAAAGCAA  900

seq1  ACAAACAAACCTGAGTACTTCCATGGGACTCTAAATTGGCTCTCAGGTCA  947
      |||||||||||||||||||||||||||||||  || ||||||||| ||||
seq2  ACAAACAAACCTGAGTACTTCCATGGGACTCCTAAATGGCTCTCA-GTCA  949

seq1  GCACCTGAGCCTTTGCTAGATCTGGAGCCGTGTTTTGTAAGTATCATTTA  997
      ||| ||||||||||||||||||||| |||| |||||||||||||||||| 
seq2  GCAACTGAGCCTTTGCTAGATCTGG-GCCG-GTTTTGTAAGTATCATTT-  996

seq1  ACATGTTT-CTTAAAGT-GACAATGAATCAGTATCAGAGTATCTGTG--A  1043
      |||||||| |||||||| ||| |||| |||| ||||||||||||| |  |
seq2  ACATGTTTCCTTAAAGTGGACGATGATTCAG-ATCAGAGTATCTGGGGAA  1045

seq1  TATTCTTTCTACACTCCCATTTTTTACATTCAGAAGGCTACGCCTAG  1090
      |||||||||||  ||||||||||||| ||||||||||   |||||||
seq2  TATTCTTTCTAACCTCCCATTTTTTA-ATTCAGAAGGGCTCGCCTAG  1091