BAC Information

Click to search

BAC

Clone NameB6Ng01-135L02
Chromosome8 (Build37)Y (Build37)
Map Location 22,119,478 - 22,119,7091,870,346 - 1,870,415
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100041654, EG574083, AY761185
Downstream geneDefcr21, LOC100038926, Defcr23, LOC100041688, Defcr25, LOC626605, LOC634825, LOC100040619, LOC100038927, Defcr22, Defcr-rs7, LOC100041759, LOC672740, EG665969, LOC100041787, Defcr3, Defcr5, LOC100041811, Defcr-rs1, LOC100040668, LOC100041843, LOC100040678, EG665927, LOC100040693, Defcr20, LOC100041890, LOC100041895, EG626682, LOC100040706, EG665956, LOC635093, Defcr26, Defcr17, LOC100041952, Defcr-ps1, AY761184, LOC100040729, Defcr24, LOC100040739, Defb1, Defb50, Defb2, Defb10, Defb9, Defb11, Defb15, Defb35, Defb13, C86695, Ccdc70, Atp7b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-135L02.bB6Ng01-135L02.g
ACCDH935666DH935667
length232433
definitionDH935666|Mus musculus domesticus DNA, BAC clone: B6Ng01-135L02, 5' end.DH935667|Mus musculus domesticus DNA, BAC clone: B6Ng01-135L02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(22,119,478 - 22,119,709)(1,870,346 - 1,870,415)
sequence
gaattccttgtattgtcttaggctctggttgctctcagaactctagaagt
ttggaaattaatcattgattcctgatgaggtacaagttgacactgagtct
ctaggtctgccctaccccagagactttcccctatgcaatctagacatgct
ctctcctctcacctctctcctctctcctcccctctccacccctctcctct
ctccactctccactctccactctccactctcc
gaattctttgtttagctctgtaagccattttataatggggctatttgaat
ttctggagttcagcttcttaagttctttgtgtatattggatgttagtccc
ctatcagatttagaattggtaaaaaagataacagtatcttttgccttaca
gaaggcttgcaattttatgaggtcccatttgttgatttttgatcttacag
cacaagccattgctgttcttttcatgattttctccccctggtgcccatat
cttcgaggcttttccccactttgtcctcctgaggctattcagtgcctggc
aaatacagaagtggatgctcacagtcacctattggatggaacatatggac
ccaaatggagaagctagagaaagtacccaaggagctgcagggatctgtaa
gcccataggtggaacaaaaatatgaactaacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_22119478_22119709
seq2: B6Ng01-135L02.b_43_274 (reverse)

seq1  GGAGAGAGGAGAGAGGAGAGAGGAGAGAGGAGAGAGGAGAGGGGAGGAGA  50
      |||||| |||||| |||||| |||||| |||||||||||||||| |||||
seq2  GGAGAGTGGAGAGTGGAGAGTGGAGAGTGGAGAGAGGAGAGGGGTGGAGA  50

seq1  GGGGAGGAGAGAGGAGAGAGGTGAGAGGAGAGAGCATGTCTAGATTGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGAGAGAGGAGAGAGGTGAGAGGAGAGAGCATGTCTAGATTGCAT  100

seq1  AGGGGAAAGTCTCTGGGGTAGGGCAGACCTAGAGACTCAGTGTCAACTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAAGTCTCTGGGGTAGGGCAGACCTAGAGACTCAGTGTCAACTTG  150

seq1  TACCTCATCAGGAATCAATGATTAATTTCCAAACTTCTAGAGTTCTGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCATCAGGAATCAATGATTAATTTCCAAACTTCTAGAGTTCTGAGA  200

seq1  GCAACCAGAGCCTAAGACAATACAAGGAATTC  232
      ||||||||||||||||||||||||||||||||
seq2  GCAACCAGAGCCTAAGACAATACAAGGAATTC  232

seq1: chrY_1870346_1870415
seq2: B6Ng01-135L02.g_432_501

seq1  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50
      |||||||||||||||||||||||  ||||||||| || || |||||||||
seq2  CTAGAGAAAGTACCCAAGGAGCTGCAGGGATCTGTAAGCCCATAGGTGGA  50

seq1  ACAACATTATGAACTAACCA  70
      |||| | |||||||||||||
seq2  ACAAAAATATGAACTAACCA  70