BAC Information

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BAC

Clone NameB6Ng01-136M24
Chromosome8 (Build37)
Map Location 52,970,187 - 52,971,274
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667517, LOC623872
Downstream geneLOC100040220, LOC623935, 1190028D05Rik, LOC676688
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136M24.bB6Ng01-136M24.g
ACCDH936487DH936488
length1,1811,078
definitionDH936487|Mus musculus domesticus DNA, BAC clone: B6Ng01-136M24, 5' end.DH936488|Mus musculus domesticus DNA, BAC clone: B6Ng01-136M24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagctccattttttaatggagttgtttgatt
ttctggagtccagcttcttgaattctttatgtatgtgtatattagtcccc
tatctcatttaggataggtaaagatcctttcccaatctgtggtcatttag
tcttgttgacggtgtctttcgccttgcagaagctttgcaacattatgagg
tcccttttatcaattcttgatcttacagcacaagccattgctcttctatt
caggaatttttcccctgtacacatatcttttaggcttttccctactttct
cctctataagtttcagtgtctctggttttatgtggagttccttaatccac
ttagatttgaccttagtacaagtagctaggaatggatcaattcacattct
tctacatgataatcgccagttgtgccagcaccttttgttgaaaaggctgt
cttttttccactggatgattttagctcccttgtcaaagatcaagtgacca
taggtgtatggattcatctcttaatcttcaaatctgttccattggtctac
ttgtctgttgctataacagtaccttgcagtttttatcacaattgctctgt
agtagagctttaggtcattcatggtgattccaccagaggttattttatcc
ttgagaagagtttttgctatcctaggtttttttttttgttattccagatg
aatgtgctgattgccttttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctatagattgcttttggcaagatagccattt
ttactatattaatcctgccaatccatgagcataggcaatctttccaactt
ctgagaacttctttaatttctttcttcagagacatgaagttcttactata
cagatctttcacttccttagttagagtcacccagtattttatactatttg
tgactatgagaggtgtgttccctatttctttctcagctgtttatctttgt
gtatagaatgcatgattgtttcagtattttatattcagatactacattgc
agctgttataggttagagtctcttggtgatttaggtcctattaccttcaa
tcacctgcaaggcattgacctctccttccaatgagcctgatctgggtcaa
tgctgctagacctccagatcaagtgtagaag
gaattctcttagtcctatgttccaattctttcctgtatagtgaaattatt
taaggtggttttaccaaaaatatttctccaagaaaagtcactgaatacca
gtgagacagaaatatcctttacctaacgcacagctatggtgataaacaaa
cgtaattacatctgtaagagtgtatttatttatggagattaatggctaca
cagagaacaatggaatgctccaaatgtgccctgacattctcattgatttg
aaggagaaacaaattagaaatagaacaagagcccttcagacaagaggact
gaacatgcaatgtctactgataagaatgatctgcctaacacatcctcaga
agatcaaagaaactcgattgttgatgggcttgaaatcatttcctttcaaa
tgtctttttcaaacacaggtacttttgttctgtcaactctggccctttca
aattctaatctttgatcttaaaaaaatgatatttcatcacaaggattaat
ctgcctttctggctaacttgtacatttttttcatggtgaagggtaaattg
aacattaattaattaaatttctattgacaatgtctatgaataatcaaatt
tggttgaccctattaccagattctgttacatgagacaatctcattaacag
ccctgagatgtcactttagagccatttggtaatagagatactgacataaa
ttaatcatgtgatgtgctctctacacttaactggatgagcattagttatt
caggctattgtttggaagcaatatacctgatatgttgaattctaaagtaa
aaccaagttaaacgaaatacaggaaaatgataagtaggaaagaatgaaat
agagttaggtggaaaatcagagatattaaaacgtataagttgttcattat
catactttattataaagtactgagtaaagtcataggaatatttgtaaatg
tttcacttaccctacaaggcatttgtatgattttataaagcattgcaaaa
tatgaatatgtttatgtggtgtgattttcacatactagtatatatctttc
aagttatgaaatttgtgaaagatttcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_52970187_52971274
seq2: B6Ng01-136M24.g_69_1146

seq1  GAATTCTCTTAGTCCTATGTTCCAATTCTTTCCTGTATAGTGAAATTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTAGTCCTATGTTCCAATTCTTTCCTGTATAGTGAAATTATT  50

seq1  TAAGGTGGTTTTACCAAAAATATTTCTCCAAGAAAAGTCACTGAATACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTGGTTTTACCAAAAATATTTCTCCAAGAAAAGTCACTGAATACCA  100

seq1  GTGAGACAGAAATATCCTTTACCTAACGCACAGCTATGGTGATAAACAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGACAGAAATATCCTTTACCTAACGCACAGCTATGGTGATAAACAAA  150

seq1  CGTAATTACATCTGTAAGAGTGTATTTATTTATGGAGATTAATGGCTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAATTACATCTGTAAGAGTGTATTTATTTATGGAGATTAATGGCTACA  200

seq1  CAGAGAACAATGGAATGCTCCAAATGTGCCCTGACATTCTCATTGATTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAACAATGGAATGCTCCAAATGTGCCCTGACATTCTCATTGATTTG  250

seq1  AAGGAGAAACAAATTAGAAATAGAACAAGAGCCCTTCAGACAAGAGGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAAACAAATTAGAAATAGAACAAGAGCCCTTCAGACAAGAGGACT  300

seq1  GAACATGCAATGTCTACTGATAAGAATGATCTGCCTAACACATCCTCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGCAATGTCTACTGATAAGAATGATCTGCCTAACACATCCTCAGA  350

seq1  AGATCAAAGAAACTCGATTGTTGATGGGCTTGAAATCATTTCCTTTCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAAAGAAACTCGATTGTTGATGGGCTTGAAATCATTTCCTTTCAAA  400

seq1  TGTCTTTTTCAAACACAGGTACTTTTGTTCTGTCAACTCTGGCCCTTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTTTCAAACACAGGTACTTTTGTTCTGTCAACTCTGGCCCTTTCA  450

seq1  AATTCTAATCTTTGATCTTAAAAAAATGATATTTCATCACAAGGATTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTAATCTTTGATCTTAAAAAAATGATATTTCATCACAAGGATTAAT  500

seq1  CTGCCTTTCTGGCTAACTTGTACATTTTTTTCATGGTGAAGGGTAAATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTTCTGGCTAACTTGTACATTTTTTTCATGGTGAAGGGTAAATTG  550

seq1  AACATTAATTAATTAAATTTCTATTGACAATGTCTATGAATAATCAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTAATTAATTAAATTTCTATTGACAATGTCTATGAATAATCAAATT  600

seq1  TGGTTGACCCTATTACCAGATTCTGTTACATGAGACAATCTCATTAACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGACCCTATTACCAGATTCTGTTACATGAGACAATCTCATTAACAG  650

seq1  CCCTGAGATGTCACTTTAGAGCCATTTGGTAATAGAGATACTGACATAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGATGTCACTTTAGAGCCATTTGGTAATAGAGATACTGACATAAA  700

seq1  TTAATCATGTGATGTGCTCTCTACACTTAACTGGATGAGCATTAGTTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCATGTGATGTGCTCTCTACACTTAACTGGATGAGCATTAGTTATT  750

seq1  CAGGCTATTGTTTGGAAGCAATATACCTGATATGTTGAATTCTAAAGTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTATTGTTTGGAAGCAATATACCTGATATGTTGAATTCTAAAGTAA  800

seq1  AACCAAGTTAAACGAAATACAGGAAAATGATAAGTAGGAAAGAATGAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAGTTAAACGAAATACAGGAAAATGATAAGTAGGAAAGAATGAAAT  850

seq1  AGAGTTAGGTGGAAAATCAGAGATATTAAAACGTATAAAGTTGTTCATTA  900
      |||||||||||||||||||||||||||||||||||| |||||||||||| 
seq2  AGAGTTAGGTGGAAAATCAGAGATATTAAAACGTAT-AAGTTGTTCATT-  898

seq1  ATCATACTTTATTATAAAGTACTGAGTAAAGTCATAGGAATATTTGTAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATACTTTATTATAAAGTACTGAGTAAAGTCATAGGAATATTTGTAAA  948

seq1  TGTTTCACTTACCCTACAAGGCAATTTGTAATGATTTTTAATAAAGCATT  1000
      |||||||||||||||||||||| |||||| ||||||||  ||||||||||
seq2  TGTTTCACTTACCCTACAAGGC-ATTTGT-ATGATTTT--ATAAAGCATT  994

seq1  GCAAAATAATGAATATGTTTATGTGTGTGATATTTCCACAATACTAGTAT  1050
      ||||||| ||||||||||||||||| |||  |||| ||| ||||||||| 
seq2  GCAAAAT-ATGAATATGTTTATGTG-GTGTGATTTTCAC-ATACTAGTA-  1040

seq1  TATATCTTCAAGGTTATGAAATATGTGAAAGATTTCAA  1088
      ||||||||  | |||||||||| |||||||||||||||
seq2  TATATCTTTCAAGTTATGAAATTTGTGAAAGATTTCAA  1078