BAC Information

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BAC

Clone NameB6Ng01-139M20
Chromosome8 (Build37)
Map Location 6,836,914 - 6,837,841
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040360
Downstream geneEG665127, EG546032
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-139M20.bB6Ng01-139M20.g
ACCDH938692DH938693
length1,189967
definitionDH938692|Mus musculus domesticus DNA, BAC clone: B6Ng01-139M20, 5' end.DH938693|Mus musculus domesticus DNA, BAC clone: B6Ng01-139M20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagatctaagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatccgattttggataggtaaaaatcctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgctttgcagaagctttgcaatttta
tgaggtcccatttattgattcttgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtacccatatctgtaaggcttttccctac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttaa
tccacttatatttgaccttagtacaaggagatagaaatggatcaattcgc
attcttctacatgataaccgccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatggttttagctcccttgtcaaagatcaagt
gaccataggtgtgtggattcatctctgggtcttcaattctgttccattgg
tctacttgtctgtcactataccagtaccatgcagttttgatcacaattgc
tctgtagtacagttttaggtccggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgtttttccagatg
aatctgctgattgccctttctaattcattgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatggccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttctttagagacttgaagttcttatcata
cagatctttcacttccttagtagagtcacgccaggtattttatatattgt
gactattgagaggtgttgtttcctaatttcatctcagcctgtttatcctt
tgtggtaagaaaggccattgactggtccgagttattttatttcaactact
cattgagctgtttatacagcttaggagttctctggtgaatttagggtcac
tttatatactacattcatctgccaagatgaagcggaatgtgcttccatat
cggaggttggacgaatttgggtgggaatctcttgactat
gaattcctcttgctcctacgtcattagatctttactttgctttcagtgta
tatttctggttccctattgttgaatttaccaaaactctaccctgtttctt
acttattcttgaatttacttttcttagtggaactagtaatacattaggac
ccaagtgaaaacttctgtttccatctagcacgtcctgatattaagaatgg
attggggacttaaaagataaacttaacccactatttggaattgaagccac
tgacttagatttccattaatttaatgcatatatttttggttaagtataaa
atatatagtttctaaaggattcaggagataaatggtgtcagaaagagagc
atggtgtgcaatgtcatagaataaatgagatatgacatagtcttttgctg
ccccacacacacctttaagaaaatgtatgtgtgatggtttatatatgctc
agcactattataaggtgtggtcttgttggagtagatgtgtcatggtgggc
ctgggccttaagaccctcaacctagtttcttggaagccagtcttccacta
gcagccttcagatgaatatgtagaattctcagctctgtctgaaacatgcc
taccgggatactgccatgttctcaccttgataataacagactgagcctct
gaacctgtaagccagccccaattaaatgttgtcctaataagaattgcttt
ggtcatggagtctgttcacagtagtaaaactctaattaaaacagtatgaa
attttcagtgtcttcgtttggatttctattgctgtgaagagacagtatga
ccatggaaaacgttatttggggctggctttcagtttaagaggtttagtcc
attgtttacagggcaggaagcatgccaatgtgcatacagacatggtgctc
aaaaggagctaagagtcctatatcagatccaaagcagcaagtaatgaatg
agatctgtcaagtaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_6836914_6837841
seq2: B6Ng01-139M20.g_68_993

seq1  GAATTCCTCTTGCTCCTACGTCATTAGATCTTTACTTTGCTTTCAGTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTTGCTCCTACGTCATTAGATCTTTACTTTGCTTTCAGTGTA  50

seq1  TATTTCTGGTTCCCTATTGTTGAATTTACCAAAACTCTACCCTGTTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTGGTTCCCTATTGTTGAATTTACCAAAACTCTACCCTGTTTCTT  100

seq1  ACTTATTCTTGAATTTACTTTTCTTAGTGGAACTAGTAATACATTAGGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATTCTTGAATTTACTTTTCTTAGTGGAACTAGTAATACATTAGGAC  150

seq1  CCAAGTGAAAACTTCTGTTTCCATCTAGCACGTCCTGATATTAAGAATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTGAAAACTTCTGTTTCCATCTAGCACGTCCTGATATTAAGAATGG  200

seq1  ATTGGGGACTTAAAAGATAAACTTAACCCACTATTTGGAATTGAAGCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGGACTTAAAAGATAAACTTAACCCACTATTTGGAATTGAAGCCAC  250

seq1  TGACTTAGATTTCCATTAATTTAATGCATATATTTTTGGTTAAGTATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTAGATTTCCATTAATTTAATGCATATATTTTTGGTTAAGTATAAA  300

seq1  ATATATAGTTTCTAAAGGATTCAGGAGATAAATGGTGTCAGAAAGAGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAGTTTCTAAAGGATTCAGGAGATAAATGGTGTCAGAAAGAGAGC  350

seq1  ATGGTGTGCAATGTCATAGAATAAATGAGATATGACATAGTCTTTTGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGTGCAATGTCATAGAATAAATGAGATATGACATAGTCTTTTGCTG  400

seq1  CCCCACACACACCTTTAAGAAAATGTATGTGTGATGGTTTATATATGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACACACACCTTTAAGAAAATGTATGTGTGATGGTTTATATATGCTC  450

seq1  AGCACTATTATAAGGTGTGGTCTTGTTGGAGTAGATGTGTCATGGTGGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTATTATAAGGTGTGGTCTTGTTGGAGTAGATGTGTCATGGTGGGC  500

seq1  CTGGGCCTTAAGACCCTCAACCTAGTTTCTTGGAAGCCAGTCTTCCACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCCTTAAGACCCTCAACCTAGTTTCTTGGAAGCCAGTCTTCCACTA  550

seq1  GCAGCCTTCAGATGAATATGTAGAATTCTCAGCTCTGTCTGAAACATGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCTTCAGATGAATATGTAGAATTCTCAGCTCTGTCTGAAACATGCC  600

seq1  TACCGGGATACTGCCATGTTCTCACCTTGATAATAACAGACTGAGCCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCGGGATACTGCCATGTTCTCACCTTGATAATAACAGACTGAGCCTCT  650

seq1  GAACCTGTAAGCCAGCCCCAATTAAATGTTGTCCTAATAAGAATTGCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTGTAAGCCAGCCCCAATTAAATGTTGTCCTAATAAGAATTGCTTT  700

seq1  GGTCATGGAGTCTGTTCACAGTAGTAAAACTCTAATTAAAACAGTATGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATGGAGTCTGTTCACAGTAGTAAAACTCTAATTAAAACAGTATGAA  750

seq1  ATTTTCAGTGTCTTCGTTTGGATTTCTATTGCTGTGAAGAGACAGTATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAGTGTCTTCGTTTGGATTTCTATTGCTGTGAAGAGACAGTATGA  800

seq1  CCATGGAAAACGTTTATTTGGGGCTGGCTTTCAGTTTAAGAGGTTTAGTC  850
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CCATGGAAAACG-TTATTTGGGGCTGGCTTTCAGTTTAAGAGGTTTAGTC  849

seq1  CATTGTTTACAGGGCAGGAAGCATGCCAATGTGCATACAGACATGGTGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTTACAGGGCAGGAAGCATGCCAATGTGCATACAGACATGGTGCT  899

seq1  CAAAAAGGAGCTAAGAGTCCTATATCAG  928
      | ||||||||||||||||||||||||||
seq2  C-AAAAGGAGCTAAGAGTCCTATATCAG  926