BAC Information

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BAC

Clone NameB6Ng01-140E02
Chromosome8 (Build37)
Map Location 62,735,243 - 62,736,424
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneAadat, Mfap3l, LOC100040679, 2700029M09Rik, Clcn3, B230317F23Rik, Nek1, Sh3rf1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140E02.bB6Ng01-140E02.g
ACCDH939035DH939036
length1,1671,160
definitionDH939035|Mus musculus domesticus DNA, BAC clone: B6Ng01-140E02, 5' end.DH939036|Mus musculus domesticus DNA, BAC clone: B6Ng01-140E02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctttgcactgtgtgggagccattctacgtggtccaaatgtttaa
atatctccctaaacttttgtattcttggctattgaaggaactccttgaac
tttgccggcaagactgtcaaaaatatcactgccctgtcagaactggatac
attaagccagaaatattcttcatttcctccaagtcaacaaaaaagtgaaa
agagactataggcatgatcaaaattttaagagaaatatttaaaaactcca
aagacaggaaaatcatatgctggttgattaaaggcggcgctgcatttata
actggtttcaccattgcatattttcgtctatatggtttggctcatggatg
gggagtcactacaatgaaatggacttctatgaataacaaactcatcactc
atagaacttctaatctaaataatcataaaagaattatgctaggtagtagt
ttaatttttataatatttaatattttgtggcacattaggctacagctaat
ataagaaaaatataaataactggaaattaaaaggaaattaaaagttagta
agatgtgaatgagtctacaacatagatccatgcactttttgaaagtttca
tctcactcatatacaaaataattagaattctttttccaagttagttaaat
gtaaccatgaggaagtaaccataaaagatgccagcatttttatgacaagg
aacgatatgaagccagaacacatgcaaacaaactttaatcaggaaagtac
tgtttacttgccagggtctgaaagggttacatagacctataaagatgaca
attttcaccctgagccctagttttcttagtagagggaatggactcagcaa
ggacaaagcactggcctctctacggaagagctacacttctgatattacag
cttttttctaatattaattaaacgtaagcaactaggagcttacagctcag
agttaaaatcagtctataatttgaagggttacatgaaactacttgatcca
aatatataaagaactctaggtagcacttgggtcactttccaactcgcatt
tgccatacttggcaataagacactaaaactccactaacctgctccttaca
acagtagcacttcagcgaatagccagacaaatggacacaaacatctggta
gctttcctttactaagg
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattgttcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctttcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgaagatgtcgctgcctgagaagctctgtggctcttgtccggaaggaggc
cggccgtctggagctgaggatggcgctgcctcagaagctctgtggctctt
gccgggagggtggctggttgtctggagctgaagatggcgccgcccagaag
ctctgcagctctcgcccgtcctagaaacggctggcactctgtattccaca
cggtcacccgtgcagcctgccctccgcggagtcccggagccaagaaggct
cccgccggcgcctgtgccacaaacctctcagcctggcagacccccgtgct
ctcaccaggaaagtggccggctgtctggagctgaagatggcgccgcccag
aagctctgcgactctcgcccgtcccagaaacggctggcactctgtattcc
acacggtcacccgtgcagcctgccctccgcggagtcccggagccaagaag
gctcccgcggcgctgtgcacaaacttctcaggctggcagacctcgtgctc
tcaccaggaagtgctggctatcttctttttcttttgaaattttttatatt
acgtattttcctcaatacaattagaatgctatccaaggtcctcataacct
tccccaattctaacccacgattccattttggcctggcatcccttgacagg
ggaataaagtgctgtccaaggcttcagaaggccacacgacatcttatgac
catacagcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_62735243_62736424
seq2: B6Ng01-140E02.b_46_1212

seq1  GAATTCCTTTGCACTGTGTGGGAGCCATTCTACGTGGTCCAAATGTTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTGCACTGTGTGGGAGCCATTCTACGTGGTCCAAATGTTTAA  50

seq1  ATATCTCCCTAAACTTTTGTATTCTTGGCTATTGAAGGAACTCCTTGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTCCCTAAACTTTTGTATTCTTGGCTATTGAAGGAACTCCTTGAAC  100

seq1  TTTGCCGGCAAGACTGTCAAAAATATCACTGCCCTGTCAGAACTGGATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCGGCAAGACTGTCAAAAATATCACTGCCCTGTCAGAACTGGATAC  150

seq1  ATTAAGCCAGAAATATTCTTCATTTCCTCCAAGTCAACAAAAAAGTGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGCCAGAAATATTCTTCATTTCCTCCAAGTCAACAAAAAAGTGAAA  200

seq1  AGAGACTATAGGCATGATCAAAATTTTAAGAGAAATATTTAAAAACTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTATAGGCATGATCAAAATTTTAAGAGAAATATTTAAAAACTCCA  250

seq1  AAGACAGGAAAATCATATGCTGGTTGATTAAAGGCGGCGCTGCATTTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGGAAAATCATATGCTGGTTGATTAAAGGCGGCGCTGCATTTATA  300

seq1  ACTGGTTTCACCATTGCATATTTTCGTCTATATGGTTTGGCTCATGGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTTTCACCATTGCATATTTTCGTCTATATGGTTTGGCTCATGGATG  350

seq1  GGGAGTCACTACAATGAAATGGACTTCTATGAATAACAAACTCATCACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTCACTACAATGAAATGGACTTCTATGAATAACAAACTCATCACTC  400

seq1  ATAGAACTTCTAATCTAAATAATCATAAAAGAATTATGCTAGGTAGTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAACTTCTAATCTAAATAATCATAAAAGAATTATGCTAGGTAGTAGT  450

seq1  TTAATTTTTATAATATTTAATATTTTGTGGCACATTAGGCTACAGCTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTTATAATATTTAATATTTTGTGGCACATTAGGCTACAGCTAAT  500

seq1  ATAAGAAAAATATAAATAACTGGAAATTAAAAGGAAATTAAAAGTTAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAAAAATATAAATAACTGGAAATTAAAAGGAAATTAAAAGTTAGTA  550

seq1  AGATGTGAATGAGTCTACAACATAGATCCATGCACTTTTTGAAAGTTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTGAATGAGTCTACAACATAGATCCATGCACTTTTTGAAAGTTTCA  600

seq1  TCTCACTCATATACAAAATAATTAGAATTCTTTTTCCAAGTTAGTTAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTCATATACAAAATAATTAGAATTCTTTTTCCAAGTTAGTTAAAT  650

seq1  GTAACCATGAGGAAGTAACCATAAAAGATGCCAGCATTTTTATGACAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCATGAGGAAGTAACCATAAAAGATGCCAGCATTTTTATGACAAGG  700

seq1  AACGATATGAAGCCAGAACACATGCAAACAAACTTTAATCAGG-AAGTAC  749
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AACGATATGAAGCCAGAACACATGCAAACAAACTTTAATCAGGAAAGTAC  750

seq1  TGTTTACTTGCCAGGGTCTGAAAGGGTTACATAGACCTATAAAGATGACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACTTGCCAGGGTCTGAAAGGGTTACATAGACCTATAAAGATGACA  800

seq1  ATTTTCACCCTGAGCCCTAGTTTTCTTAGTAGAGGGAATGGACTCAGCAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCACCCTGAGCCCTAGTTTTCTTAGTAGAGGGAATGGACTCAGCAA  850

seq1  GGACAAAGCACTGGCCTCTCTACGGAAGAGCTACACTTCTGATATTACAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAAGCACTGGCCTCTCTACGGAAGAGCTACACTTCTGATATTACAG  900

seq1  CTTTTTTCTAATATTAATTAAACGTAAGCAACTAGGAGCTTACAGCTCAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTCTAATATTAATTAAACGTAAGCAACTAGGAGCTTACAGCTCAG  950

seq1  AGTTAAAAATCAGTCTATTAATTTGAAGGGTTACATGAAACTACTTTGAT  999
      |||| |||||||||||| |||||||||||||||||||||||||| |||||
seq2  AGTT-AAAATCAGTCTA-TAATTTGAAGGGTTACATGAAACTAC-TTGAT  997

seq1  CCAAATATATAAAGAACTCTTAGTTAGCACTTTGGTCCACTTTCCCACTC  1049
      ||||||||||||||||||| ||| |||||||| ||| |||||||| ||||
seq2  CCAAATATATAAAGAACTC-TAGGTAGCACTTGGGT-CACTTTCCAACTC  1045

seq1  GCATTTGCCCATACTTTTGCAATAAAGACACTAAAAACTCCACTAAACTG  1099
      ||||||| |||||| || ||||| |||||||| ||||||||||||| |||
seq2  GCATTTG-CCATAC-TTGGCAAT-AAGACACT-AAAACTCCACTAACCTG  1091

seq1  CTCC-TACAACAGGTAAGCACTTTCAGCAAAATAGCAAGACAAAATTGGC  1148
      |||| ||||||||   ||||| ||||||  |||||| |||||||  ||| 
seq2  CTCCTTACAACAG--TAGCAC-TTCAGC-GAATAGCCAGACAAA--TGG-  1134

seq1  ACACAAACATCT-GTAGCTTTTCTATAAACTAAGG  1182
      |||||||||||| |||||||| || |  |||||||
seq2  ACACAAACATCTGGTAGCTTTCCTTT--ACTAAGG  1167