BAC Information

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BAC

Clone NameB6Ng01-141G13
Chromosome8 (Build37)
Map Location 19,702,773 - 19,736,306
singlet/doubletdoublet
Overlap geneEG665730, 4930467E23Rik
Upstream geneMcph1, Angpt2, Agpat5, LOC100040486, Xkr5, Defb40, Defb37, Defb38, Defb39, Defb12, Defb34, EG546038, Spag11, Defb14, Defb4, EG654452, Defb6, EG574081, Defb5, Defb3, Defb54-ps, LOC100040504, LOC100040514, Defb8, LOC100040528, LOC100041511, Defb7, LOC670326, LOC100040561, LOC624198
Downstream geneLOC100041567, LOC547150, LOC100040599, EG665822, 6820431F20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141G13.bB6Ng01-141G13.g
ACCDH939875DH939876
length1,067156
definitionDH939875|Mus musculus domesticus DNA, BAC clone: B6Ng01-141G13, 5' end.DH939876|Mus musculus domesticus DNA, BAC clone: B6Ng01-141G13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,735,230 - 19,736,306)(19,702,773 - 19,702,926)
sequence
gaattcacttttcagcaattgactatgcattgctgactgctctcctccca
ccttttctcaagagaaaatatgaggaatacttagctcttaattaaaacac
aaagaaaggtgcacgcgcacgcaaacacacaaacacacacacacacacac
taaaaagaattaaagacaagatcgggcatgctcagggtggtttggctgta
gacacttatggaagtctaaaaggaaggattccaggcctgaaggagatagg
aactccagagaatgaccaaccaccagaatcaaataacatgaaccctcagg
gcactcagagatggaacaatgaaacaaagaacaaacatgggttggacgga
tatctccgagcacctatgtagcagaggggcagctaggtcttcacatgggt
cccaatcaactggaatgggggtatcaaaaaaagctgttcatcctacctca
gttttattcttctagctgagctactttttctgtcctcagagagagacgaa
gtgccagggtttggacatacagggagaaactgctcagaggtgaagtggag
gaggggcagggagagactgtgggactgggtgaccaggagggggtcactga
gctagatgtaaacataagaaaaaaattaaattaaatttttacagaaatca
ttaaagttttgaaatgtatcttaaatcacagaaagaactgttatttggaa
ataatggctcacataaacaacagatatacatgtctactaaacagaaaatt
tcagcataaacagatgtattccatatggaaaaagcatgtggcattgtaag
agcaaactctttcagagctatatattcacagaattcagtacaagatttat
aacgctaattaaagtagtagactctgcggaaagaaatgactacttatata
tccactatgaagcttctatctgaatgggaagaaaatgtctttgaactgcc
gaatcaccaagttgtggggacctgtgctaggaacagtttagatcatctct
cagtaaaaggaagttttctgcttgacttggacatttcagactcaaacatc
attggaacacctgcttg
ccgaaatttctccctctctaaggtgactctgaaagcctgggttgacttgc
aacattggcaaatcctgaaggcctaccaggctttggcgccagggtcccag
gaagtgagtgactcttgccttgggctgcagtagaattgttgggggtgggg
tggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_19735230_19736306
seq2: B6Ng01-141G13.b_51_1117 (reverse)

seq1  CAAGCAGTGTTTCCAAATGATGTTTGAGTCTTGAAATGTCCAAGTC-AGC  49
      ||||||| || | | ||||||||||||||| ||||||||||||||| |||
seq2  CAAGCAG-GTGTTCCAATGATGTTTGAGTC-TGAAATGTCCAAGTCAAGC  48

seq1  AGAAAACTACCTTTCACTGGGAGATGTTCTTAAACTG-TCCTAGCACAGG  98
      |||||||| ||||| |||| |||||| || ||||||| ||||||||||||
seq2  AGAAAACTTCCTTTTACTGAGAGATGATC-TAAACTGTTCCTAGCACAGG  97

seq1  TACCCAGCAACTTTGGTGATTCGGCAGTTC-AAGACATTTTTCTTCCCCA  147
      | |||| |||| |||||||||||||||||| |||||| ||||||||||  
seq2  TCCCCA-CAAC-TTGGTGATTCGGCAGTTCAAAGACA-TTTTCTTCCC--  142

seq1  TTTCAGATGGAGCTTTCATAGTGGATATATAAGTAGTTCATTTCTTTCCG  197
       ||||||| ||   |||||||||||||||||||||| |||||||||||||
seq2  ATTCAGATAGAAGCTTCATAGTGGATATATAAGTAG-TCATTTCTTTCCG  191

seq1  CAGAGTCTACTACTTTAATTAGCGTTATAAATCTTGTACTGAATTCTGTG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTCTACTACTTTAATTAGCGTTATAAATCTTGTACTGAATTCTGTG  241

seq1  AATATATAGCTCTGAAAGAGTTTGCTCTTACAATGCCACATGCTTTTTCC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATAGCTCTGAAAGAGTTTGCTCTTACAATGCCACATGCTTTTTCC  291

seq1  ATATGGAATACATCTGTTTATGCTGAAATTTTCTGTTTAGTAGACATGTA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGAATACATCTGTTTATGCTGAAATTTTCTGTTTAGTAGACATGTA  341

seq1  TATCTGTTGTTTATGTTGAGCCATTATTTCCAAATAACAGTTCTTTCTGT  397
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TATCTGTTGTTTATG-TGAGCCATTATTTCCAAATAACAGTTCTTTCTGT  390

seq1  GATTGAAGATACATTTCAAAACTTTAATGATTTCTGTAAAAATTTAATTT  447
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAAGATACATTTCAAAACTTTAATGATTTCTGTAAAAATTTAATTT  440

seq1  AATTTTTTTCTTATGTTTACATCTAGCTCAGTGACCCCCTCCTGGTCACC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTTCTTATGTTTACATCTAGCTCAGTGACCCCCTCCTGGTCACC  490

seq1  CAGTCCCACAGTCTCTCCCTGCCCCTCCTCCACTTCACCTCTGAGCAGTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCCACAGTCTCTCCCTGCCCCTCCTCCACTTCACCTCTGAGCAGTT  540

seq1  TGGGACTCCCTGTATGTCCAAACCCTGGCACTTCGTCTCTCTCTGAGGAC  597
      |    |||||||||||||||||||||||||||||||||||||||||||||
seq2  T----CTCCCTGTATGTCCAAACCCTGGCACTTCGTCTCTCTCTGAGGAC  586

seq1  AGAAAAAGTAGCTCAGCTAGAAGAATAAAACTGAGGTAGGATGAACAGCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAGTAGCTCAGCTAGAAGAATAAAACTGAGGTAGGATGAACAGCT  636

seq1  TTTTTTGATACCCCCATTCCAGTTGATTGGGACCCATGTGAAGACCTAGC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGATACCCCCATTCCAGTTGATTGGGACCCATGTGAAGACCTAGC  686

seq1  TGCCCCTCTGCTACATAGGTGCTCGGAGATATCCGTCCAACCCATGTTTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCTCTGCTACATAGGTGCTCGGAGATATCCGTCCAACCCATGTTTG  736

seq1  TTCTTTGTTTCATTGTTCCATCTCTGAGTGCCCTGAGGGTTCATGTTATT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGTTTCATTGTTCCATCTCTGAGTGCCCTGAGGGTTCATGTTATT  786

seq1  TGATTCTGGTGGTTGGTCATTCTCTGGAGTTCCTATCTCCTTCAGGCCTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTGGTGGTTGGTCATTCTCTGGAGTTCCTATCTCCTTCAGGCCTG  836

seq1  GAATCCTTCCTTTTAGACTTCCATAAGTGTCTACAGCCAAACCACCCTGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCTTCCTTTTAGACTTCCATAAGTGTCTACAGCCAAACCACCCTGA  886

seq1  GCATGCCCGATCTTGTCTTTAATTCTTTTTAGTGTGTGTGTGTGTGTGTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCCCGATCTTGTCTTTAATTCTTTTTAGTGTGTGTGTGTGTGTGTT  936

seq1  TGTGTGTTTGCGTGCACGTGCACCTTTGTTTGTGTTTTAATTAAGAGCTA  997
      ||||||||||||||| ||||||||||| ||||||||||||||||||||||
seq2  TGTGTGTTTGCGTGCGCGTGCACCTTTCTTTGTGTTTTAATTAAGAGCTA  986

seq1  AGTATTCCTCATATTTTCTCTTGAGAAAAGGTGGGAGGAGAGCAGTCAGC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTCCTCATATTTTCTCTTGAGAAAAGGTGGGAGGAGAGCAGTCAGC  1036

seq1  AAT-CATAGTCAATTGCTGAAAAGTGAATTC  1077
      ||| |||||||||||||||||||||||||||
seq2  AATGCATAGTCAATTGCTGAAAAGTGAATTC  1067

seq1: chr8_19702773_19702926
seq2: B6Ng01-141G13.g_76_229

seq1  GAAATTTCTCCCTCTCTAAGGTGACTCTGAAAGCCTGGGTTGACTAGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAAATTTCTCCCTCTCTAAGGTGACTCTGAAAGCCTGGGTTGACTTGCAA  50

seq1  CATTGGCAAATCCTGAAGGCCTACCAGGCTTTGGCGCCAGGGTCCCAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGCAAATCCTGAAGGCCTACCAGGCTTTGGCGCCAGGGTCCCAGGA  100

seq1  AGTGAGTGACTCTTGCCTTGGGCTGCAGTAGAATTGTTGGGGGTGGGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTGACTCTTGCCTTGGGCTGCAGTAGAATTGTTGGGGGTGGGGTG  150

seq1  GGGT  154
      ||||
seq2  GGGT  154