BAC Information

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BAC

Clone NameB6Ng01-142A10
Chromosome8 (Build37)
Map Location 53,254,291 - 53,255,370
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667517, LOC623872
Downstream geneLOC100040220, LOC623935, 1190028D05Rik, LOC676688
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142A10.bB6Ng01-142A10.g
ACCDH940330DH940331
length5901,067
definitionDH940330|Mus musculus domesticus DNA, BAC clone: B6Ng01-142A10, 5' end.DH940331|Mus musculus domesticus DNA, BAC clone: B6Ng01-142A10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cagtgactgattcaaattgagatccatctcaaagggaggttagaaagcct
gacactaatattgatgctatggtgtgcttacagacatggctgtcctctta
gaggcccaagaagtagctgaaacattcagtttcagatatttacacccagc
caatggacattagctcgtgatccctgtggttgaattagggaaaagctaga
agaagctgaggataagggcaaccctagaggaagatcagaattctaaacta
acctgtgccccgagattgcttagacactgagccaccaaccaggcagaata
tatcagctgatatgaggcccccaacacatacatagtagaagacttctgtg
tcttgactcagtgagagaagatgcacataaacctcaagtgacttgaagcc
ccagggactggggagatctgttagggcaggggttggggggtggagacatc
ttcctggagatggtggggtgggaggaggtatggtatgtggaacagtcata
gggcaaaacaggagtgggaaagactggtctgtaaaaagattgaagaataa
aaaatccaagattatctgatttttttagtttaaagaaaga

gaattccaggacagggaagcaggaacgggtgtgtttgtgaacagggggga
gatgccaccaggggtttttggagaggaaatgaggaaagaggataaaaatt
gaaatataaataaaaaatatctaataataataaaataaataaattataaa
ttatttattatttagctgtatttttttaaatttttaattaataatgggat
tttttatcattaggacaaatgtaatattttgaaaataattgtagatttat
gtgtacacatacatatccacacatacctattgggtattggttatttaggg
gtaattattatgttcactagtgtctttgctagagttcaattcctgtgata
aatatgaacaaaggaaacttggagaaaaaatatttattctagcttacagt
tctcagtttagaattcatcatagaagtaagtcaagcaggaacttggaggc
gagagctaaagcaaaggccatggtgtagtgctgcctactgacttagtcct
catgtcttgttcagtgcacacacttgtagcacctaccagtccctgcccac
gtgtggaaccatccacagtttaaatgggacaacctagatcaatcattaat
caagaaaaaaaaattatttgtccttgggccaatcaggtgggagttatttt
cttaattaatgtttctctttcaaaatgactctaatcagtgtccaatgggt
gtagaaaacctagcaagcacaaacaggttataccctcttccctcattggt
gctattaattcaaccctaacaaacacttgtcgtttgctttcagtgagtat
atgttccatacattatttccagatagaagccttatgttaccttaccatgc
tgtgccttagaacaatacagttctcaccttcagtcaccatttttctcatt
tatgaccatctcttgtcctgtaatttgccattgcccagaactccataaac
accattatctgtatatcattggatcttagatttcatagccatgcttttct
tttgttctgactattttttttgtcatagtctaacatctacaaagctattt
agtggtctaatgcagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_53254291_53255370
seq2: B6Ng01-142A10.g_67_1133 (reverse)

seq1  AACTGCCATTTAGACACTATAAATAGACTTTGTAGATGTTAGACTATGAA  50
      ||||||   |||||| |  ||||||| |||||||||||||||||||||| 
seq2  AACTGC--ATTAGAC-CACTAAATAG-CTTTGTAGATGTTAGACTATGA-  45

seq1  CAAAAAAAAATAGGTCAGGAACAAAAAGAAAAGCATTGGCTATGAAATCT  100
        |||||||||| |||| |||| |||||||||||| ||||||||||||||
seq2  -CAAAAAAAATA-GTCA-GAAC-AAAAGAAAAGCA-TGGCTATGAAATCT  90

seq1  AAGATCCAATGATATTACAGATAATGGTGTTTATGGAGGTTCTTGGGCAA  150
      |||||||||||||| |||||||||||||||||||||| |||| |||||||
seq2  AAGATCCAATGATA-TACAGATAATGGTGTTTATGGA-GTTC-TGGGCAA  137

seq1  TGGCAAATTACAGGACAAGAGATGGTCATAAATGAGAAAAATGGTGACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAATTACAGGACAAGAGATGGTCATAAATGAGAAAAATGGTGACTG  187

seq1  AAGGTGAGAACTGTATTGTTCTAAGGCACAGCATGGTAAGGTAACATAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGAGAACTGTATTGTTCTAAGGCACAGCATGGTAAGGTAACATAAG  237

seq1  GCTTCTATCTGGAAATAATGTATGGAACATATACTCACTGAAAGCAAACG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTATCTGGAAATAATGTATGGAACATATACTCACTGAAAGCAAACG  287

seq1  ACAAGTGTTTGTTAGGGTTGAATTAATAGCACCAATGAGGGAAGAGGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTGTTTGTTAGGGTTGAATTAATAGCACCAATGAGGGAAGAGGGTA  337

seq1  TAACCTGTTTGTGCTTGCTAGGTTTTCTACACCCATTGGACACTGATTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTGTTTGTGCTTGCTAGGTTTTCTACACCCATTGGACACTGATTAG  387

seq1  AGTCATTTTGAAAGAGAAACATTAATTAAGAAAATAACTCCCACCTGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTTTGAAAGAGAAACATTAATTAAGAAAATAACTCCCACCTGATT  437

seq1  GGCCCAAGGACAAATAATTTTTTTTTCTTGATTAATGATTGATCTAGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAAGGACAAATAATTTTTTTTTCTTGATTAATGATTGATCTAGGTT  487

seq1  GTCCCATTTAAACTGTGGATGGTTCCACACGTGGGCAGGGACTGGTAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCATTTAAACTGTGGATGGTTCCACACGTGGGCAGGGACTGGTAGGT  537

seq1  GCTACAAGTGTGTGCACTGAACAAGACATGAGGACTAAGTCAGTAGGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAAGTGTGTGCACTGAACAAGACATGAGGACTAAGTCAGTAGGCAG  587

seq1  CACTACACCATGGCCTTTGCTTTAGCTCTCGCCTCCAAGTTCCTGCTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACACCATGGCCTTTGCTTTAGCTCTCGCCTCCAAGTTCCTGCTTGA  637

seq1  CTTACTTCTATGATGAATTCTAAACTGAGAACTGTAAGCTAGAATAAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTCTATGATGAATTCTAAACTGAGAACTGTAAGCTAGAATAAATA  687

seq1  TTTTTTCTCCAAGTTTCCTTTGTTCATATTTATCACAGGAATTGAACTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTCCAAGTTTCCTTTGTTCATATTTATCACAGGAATTGAACTCT  737

seq1  AGCAAAGACACTAGTGAACATAATAATTACCCCTAAATAACCAATACCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGACACTAGTGAACATAATAATTACCCCTAAATAACCAATACCCA  787

seq1  ATAGGTATGTGTGGATATGTATGTGTACACATAAATCTACAATTATTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTATGTGTGGATATGTATGTGTACACATAAATCTACAATTATTTTC  837

seq1  AAAATATTACATTTGTCCTAATGATAAAAAATCCCATTATTAATTAAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTACATTTGTCCTAATGATAAAAAATCCCATTATTAATTAAAAA  887

seq1  TTTAAAAAAATACAGCTAAATAATAAATAATTTATAATTTATTTATTTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAAATACAGCTAAATAATAAATAATTTATAATTTATTTATTTTA  937

seq1  TTATTATTAGATATTTTTTATTTATATTTCAATTTTTATCCTCTTTCCTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTAGATATTTTTTATTTATATTTCAATTTTTATCCTCTTTCCTC  987

seq1  ATTTCCTCTCCAAAAACCCCTGGTGGCATCTCCCCCCTGTTCACAAACAC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTCTCCAAAAACCCCTGGTGGCATCTCCCCCCTGTTCACAAACAC  1037

seq1  ACCCGTTCCTGCTTCCCTGTCCTGGAATTC  1080
      ||||||||||||||||||||||||||||||
seq2  ACCCGTTCCTGCTTCCCTGTCCTGGAATTC  1067


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