BAC Information

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BAC

Clone NameB6Ng01-142O18
Chromosome8 (Build37)
Map Location 17,937,541 - 17,937,973
singlet/doubletsinglet
Overlap genenone
Upstream geneCsmd1
Downstream geneLOC665638, LOC100040466, Mcph1, Angpt2, Agpat5, LOC100040486, Xkr5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142O18.bB6Ng01-142O18.g
ACCDH940996DH940997
length1,215427
definitionDH940996|Mus musculus domesticus DNA, BAC clone: B6Ng01-142O18, 5' end.DH940997|Mus musculus domesticus DNA, BAC clone: B6Ng01-142O18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccttcgcctaggacgtgtcactccctgattggctgcagcccat
cggccgagttgacgtcacggggaaggcagagcacatggagtgaagaacca
ccctcggcacatgcgcagattatttgtttaccacttagaacacagctgtc
agtgccatcttgtaacggcgaatgtgggcgcggctcccaacagttaagtt
ccttaaactgtaacaaaaccgtaactttcaatacctcctctctaccacag
tgccttacaattcagagcatgttgattctttgtggtactcaggtatatca
tcttctacctgccagctcatcaaaagtttgtacactggtatatctttttc
cttaattatctgtgataagtagacagcagcccctacaaatccctgttgtg
gataactaccctgtcataataaaagggaaatgcaaatcctgcccctcctg
cctgttgcaggaataactgcaggtgctgccaccagaacagcagggctggc
cacctccctaaccttgtacaatcagttctccttccggttcatctaggctc
ttcaacaatgggcccaaaatttactcactctccaaggctgtgtttctctt
cccctatcccttcttcctttcctttcctttcctttcctttcctttccttt
cctttcctttcctttcctttcctttcctttcctttccagaagtagccttt
gttcctctttttttttttttttttttttgtaataagcctccatgtgagac
ctgttgcatggtgtgattttattctctatcccctgctcttcctcccctct
ctcctaggtccattcttctggccatgttcagtctagtccttttttcgttc
tgctctggattcttccagatgcctctgactgttggtctctcatatctaca
tacatcttcccctcagcacactatcagtcatttcgtcagtttatcagtgg
aacggatccttgttatatctcagagggcaaaatttaataaaatctgaagt
cattgagtacagctcctatgtttctgggagagtaccttgcatgactcgag
tacagaaagcgaactcataacttagctgtgtagttctgagttagtatgca
gtaaaagtttatgttctagtagaggtccaggaagagactgcataagattc
ctgtttatgtagatggcgtaatgtaggtcctaatcgacgagtggcagtaa
ggtaggtgtaggact
agtggagagcttgtggggcacagcatagaaacagaaagagcaaactgccc
tgaacttatactagaaaactcaattttaattactaaatgctcagcttaaa
aaatttcagaatggtttatgcttgtgcccacttctcactcctgaatctag
aaagaactaaacatacagggtcctactgtttgatgataagcacagctatt
tggagaacgtcctaatagccacagacaatggccacattgagtctcacctg
cacaggggggagctggtgatgcttttccttcactttgcttattcctgtgc
tcacagtttcctatttcattcttttctactctctttttttccctacctaa
tcactgccacccacatctcttttactgtttttagatttatttgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_17937541_17937973
seq2: B6Ng01-142O18.g_69_501

seq1  GAATTCAGTGGAGAGCTTGTGGGGCACAGCATAGAAACAGAAAGAGCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGGAGAGCTTGTGGGGCACAGCATAGAAACAGAAAGAGCAAA  50

seq1  CTGCCCTGAACTTATACTAGAAAACTCAATTTTAATTACTAAATGCTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTGAACTTATACTAGAAAACTCAATTTTAATTACTAAATGCTCAG  100

seq1  CTTAAAAAATTTCAGAATGGTTTATGCTTGTGCCCACTTCTCACTCCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAAAATTTCAGAATGGTTTATGCTTGTGCCCACTTCTCACTCCTGA  150

seq1  ATCTAGAAAGAACTAAACATACAGGGTCCTACTGTTTGATGATAAGCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGAAAGAACTAAACATACAGGGTCCTACTGTTTGATGATAAGCACA  200

seq1  GCTATTTGGAGAACGTCCTAATAGCCACAGACAATGGCCACATTGAGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTTGGAGAACGTCCTAATAGCCACAGACAATGGCCACATTGAGTCT  250

seq1  CACCTGCACAGGGGGGAGCTGGTGATGCTTTTCCTTCACTTTGCTTATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGCACAGGGGGGAGCTGGTGATGCTTTTCCTTCACTTTGCTTATTC  300

seq1  CTGTGCTCACAGTTTCCTATTTCATTCTTTTCTACTCTCTTTTTTTCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTCACAGTTTCCTATTTCATTCTTTTCTACTCTCTTTTTTTCCCT  350

seq1  ACCTAATCACTGCCACCCACATCTCTTTTACTGTTTTTAGATTTATTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAATCACTGCCACCCACATCTCTTTTACTGTTTTTAGATTTATTTGT  400

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  433
      |||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  433