BAC Information

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BAC

Clone NameB6Ng01-143F13
Chromosome8 (Build37)
Map Location 85,211,818 - 85,386,861
singlet/doubletdoublet
Overlap geneLOC675800, EG666289, Zfp330
Upstream geneInpp4b, LOC671182, Il15, EG666564
Downstream geneRnf150, LOC100039688, Tbc1d9, Ucp1, Elmod2, 4933434I20Rik, Clgn, Scoc, LOC546077, LOC675854, Olfr370, Ndufb7, Gpsn2, Dnajb1, Gipc1, Ptger1, Pkn1, Ddx39, Cd97
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143F13.bB6Ng01-143F13.g
ACCDH941307DH941308
length273296
definitionDH941307|Mus musculus domesticus DNA, BAC clone: B6Ng01-143F13, 5' end.DH941308|Mus musculus domesticus DNA, BAC clone: B6Ng01-143F13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,211,818 - 85,212,090)(85,386,566 - 85,386,861)
sequence
gaattcttccacaacttggtttatgtaaagctatgagtcagacccaggtc
tttgtgcaaattaggcaactgctctcacaactgggctccatctcctcttc
ccctactcgagagtgcacacacacacacacacacacacacacacacacac
acacacacagcagcagcagcagcagcagctatatgtgagtttaaaaatga
gagagaagggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagg
aaggaaggaaggaaggaaggaag
cagttttaaaccaggactgatcagcatgaattcaggagaatttcacattt
attaagtcaggggtggggtccttggtgatgcacactctgctggtctaagg
accagtctgtggtgtgggtaaaagtgacttcttttcctctgctctggaag
ccagctcatggcatggcgttagttttcttagaaaatggacctctcctcat
actttaagattgagacattttgcctccattcccactctaatagccctgcc
ttagaggattcacagcgtcagtaggtggtatgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_85211818_85212090
seq2: B6Ng01-143F13.b_46_318

seq1  GAATTCTTCCACAACTTGGTTTATGTAAAGCTATGAGTCAGACCCAGGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCACAACTTGGTTTATGTAAAGCTATGAGTCAGACCCAGGTC  50

seq1  TTTGTGCAAATTAGGCAACTGCTCTCACAACTGGGCTCCATCTCCTCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCAAATTAGGCAACTGCTCTCACAACTGGGCTCCATCTCCTCTTC  100

seq1  CCCTACTCGAGAGTGCACACACACACACACACACACACACACACACACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACTCGAGAGTGCACACACACACACACACACACACACACACACACAC  150

seq1  ACACACACAGCAGCAGCAGCAGCAGCAGCTATATGTGAGTTTAAAAATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACAGCAGCAGCAGCAGCAGCAGCTATATGTGAGTTTAAAAATGA  200

seq1  GAGAGAAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG  250

seq1  AAGGAAGGAAGGAAGGAAGGAAG  273
      |||||||||||||||||||||||
seq2  AAGGAAGGAAGGAAGGAAGGAAG  273

seq1: chr8_85386566_85386861
seq2: B6Ng01-143F13.g_74_369 (reverse)

seq1  CACACACACACACACATACCACCTACTGACGCTGTGAATCCTCTAAGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACATACCACCTACTGACGCTGTGAATCCTCTAAGGCA  50

seq1  GGGCTATTAGAGTGGGAATGGAGGCAAAATGTCTCAATCTTAAAGTATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTATTAGAGTGGGAATGGAGGCAAAATGTCTCAATCTTAAAGTATGA  100

seq1  GGAGAGGTCCATTTTCTAAGAAAACTAACGCCATGCCATGAGCTGGCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGTCCATTTTCTAAGAAAACTAACGCCATGCCATGAGCTGGCTTC  150

seq1  CAGAGCAGAGGAAAAGAAGTCACTTTTACCCACACCACAGACTGGTCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCAGAGGAAAAGAAGTCACTTTTACCCACACCACAGACTGGTCCTT  200

seq1  AGACCAGCAGAGTGTGCATCACCAAGGACCCCACCCCTGACTTAATAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGCAGAGTGTGCATCACCAAGGACCCCACCCCTGACTTAATAAAT  250

seq1  GTGAAATTCTCCTGAATTCATGCTGATCAGTCCTGGTTTAAAACTG  296
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAATTCTCCTGAATTCATGCTGATCAGTCCTGGTTTAAAACTG  296