BAC Information

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BAC

Clone NameB6Ng01-144A08
Chromosome8 (Build37)
Map Location 18,269,395 - 18,270,440
singlet/doubletsinglet
Overlap geneLOC100040466
Upstream geneCsmd1, LOC665638
Downstream geneMcph1, Angpt2, Agpat5, LOC100040486, Xkr5, Defb40, Defb37, Defb38, Defb39, Defb12, Defb34, EG546038, Spag11, Defb14, Defb4, EG654452, Defb6, EG574081, Defb5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144A08.bB6Ng01-144A08.g
ACCDH941806DH941807
length1,0361,172
definitionDH941806|Mus musculus domesticus DNA, BAC clone: B6Ng01-144A08, 5' end.DH941807|Mus musculus domesticus DNA, BAC clone: B6Ng01-144A08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaaggcctccaatggtagaataatattccttcttatgtgtgtg
tcacatttttctttatttgtcgagtcattgatagctgtttaggagatctg
tgcaagacaagtatagcagcttttgttaatactggattcagtggctggtg
ataccatttactaatgacccagtaacacagaatcaacaccaccacaactt
aaaagttgtgtccttaatcattactaattggatataccctctgcagtaag
ttaccatcatgaattctaatcttttattctatatactaaatattcaagtc
aaacaaaacaaaacaatgcaaaacaaccaaataagcaaaaccatggaaaa
gttccatgatgaatgcaaaataattttctgtttatatgttccccattcaa
ttgacaaatcaaattatatgtttcttcttagtctgttatttaattttgga
aacactctaacatgttttctttttattgtttgtcatgtttactttaaggt
cattccagagttgcttgcaatagttgtatagtattctactgtgagagact
tacaatgttccagacacctactagaatgcattaaataaaagccactaatc
tcccattattacaacagagctgaagtgaacattactgtacattgactatt
tcccactgttatattaggtattctttccttgctttggtgaaataccacac
ccagaagtgacttatggaagaaaaactttctcttggcttatagctcagag
aaacaagaatgcatcatggtatgcagacatggtagaagaggcaagaaact
gagagatgatatctccaaatacacccacagcaaaggggggaagaagaaga
agaaggaagaggaggaggaggaagaagagaagagaaagagaagagatgaa
agaggaggaggagaatagactggaagtgaggtatggctctaacctttccc
agcctacctgcagatgcattcttcatcaaaggttcatggctttatggctc
catgcactcagtcccacaacaaggttcccctcgccc
gaattctcacctgaggaatatcgaatggctgagaagtacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccaatcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtgttgaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaaacagtctggtggttcctca
gaaaattggacatagtactaccggaggatcccgcaatacctcttctgggc
atatatccagaagatgtcccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggtaa
atggatgaatctggaggacatcatcctgagtgaggtaacccaatcacaaa
agaactcacatgatatgtactcactgataagtggatattagcccagaaac
atagaatacctgagatataagatacaatttgcaaaacacacgaaactcaa
gaagaacaaagactaaagtgtggacaatttgccccttcttagaattggga
acaaaacacccttggaaggagttacagagacaaagtttggagctgtgacg
aaaggaaaggatgaaccatctagaaactgccatatccggggatccatcct
ataatcagcttccaaacgctgacaccattgcatactctagcaagattttg
ctgaaaggacccagatatagctgtctcttgtgagactatgctggggccta
gcaaacacagaagtggatgctcacagtcagctattgaatggatcacaggg
ccccaatggagagctagagaaagtaccaaggagctaaagggatctgcacc
ctataggtggactacaatatgaactaccagtcctccggagcttttgtctc
ttagctgcatatattattacgaagaatgctagtcgcatcactggaaagag
agtcattgatcattcacttattgcccgatacagggaacgccaggcaaagg
tggagtgggatgtgagagggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_18269395_18270440
seq2: B6Ng01-144A08.b_44_1079 (reverse)

seq1  GGGCGGAGGGGAA-CATGTTGTGGGACCTGAGTGCATGGAGCCATAGAGC  49
      |||| |||||||| | |||||||||| ||||||||||||||||||| |||
seq2  GGGC-GAGGGGAACCTTGTTGTGGGA-CTGAGTGCATGGAGCCATAAAGC  48

seq1  CATGGACCTTTGATGGAAGAATTGCATCCTGGCAGGTAGGCTGGGAAAGG  99
      |||| ||||||||| |||||| ||||||   |||||||||||||||||||
seq2  CATGAACCTTTGAT-GAAGAA-TGCATC--TGCAGGTAGGCTGGGAAAGG  94

seq1  TTAGAGCCATACCTCACTTCCAGTTCTTATTCTCCTCCTCCTCTTTCCTT  149
      ||||||||||||||||||||||||   ||||||||||||||||||| | |
seq2  TTAGAGCCATACCTCACTTCCAGT--CTATTCTCCTCCTCCTCTTT-CAT  141

seq1  CTCCTTCTCTTTCTCCTTCTCTTCTTCCTCCTCCTCCTCTTCCTTCTTCT  199
      || ||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CT-CTTCTCTTTCT-CTTCTCTTCTTCCTCCTCCTCCTCTTCCTTCTTCT  189

seq1  TCTTCTTCCCCCCTTTGCTGTGGGTGTATTTGGAGATATCATCTCTCAGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTCCCCCCTTTGCTGTGGGTGTATTTGGAGATATCATCTCTCAGT  239

seq1  TTCTTGCCTCTTCTACCATGTCTGCATACCATGATGCATTCTTGTTTCTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGCCTCTTCTACCATGTCTGCATACCATGATGCATTCTTGTTTCTC  289

seq1  TGAGCTATAAGCCAAGAGAAAGTTTTTCTTCCATAAGTCACTTCTGGGTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTATAAGCCAAGAGAAAGTTTTTCTTCCATAAGTCACTTCTGGGTG  339

seq1  TGGTATTTCACCAAAGCAAGGAAAGAATACCTAATATAACAGTGGGAAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTTCACCAAAGCAAGGAAAGAATACCTAATATAACAGTGGGAAAT  389

seq1  AGTCAATGTACAGTAATGTTCACTTCAGCTCTGTTGTAATAATGGGAGAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAATGTACAGTAATGTTCACTTCAGCTCTGTTGTAATAATGGGAGAT  439

seq1  TAGTGGCTTTTATTTAATGCATTCTAGTAGGTGTCTGGAACATTGTAAGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGCTTTTATTTAATGCATTCTAGTAGGTGTCTGGAACATTGTAAGT  489

seq1  CTCTCACAGTAGAATACTATACAACTATTGCAAGCAACTCTGGAATGACC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCACAGTAGAATACTATACAACTATTGCAAGCAACTCTGGAATGACC  539

seq1  TTAAAGTAAACATGACAAACAATAAAAAGAAAACATGTTAGAGTGTTTCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTAAACATGACAAACAATAAAAAGAAAACATGTTAGAGTGTTTCC  589

seq1  AAAATTAAATAACAGACTAAGAAGAAACATATAATTTGATTTGTCAATTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAAATAACAGACTAAGAAGAAACATATAATTTGATTTGTCAATTG  639

seq1  AATGGGGAACATATAAACAGAAAATTATTTTGCATTCATCATGGAACTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGGAACATATAAACAGAAAATTATTTTGCATTCATCATGGAACTTT  689

seq1  TCCATGGTTTTGCTTATTTGGTTGTTTTGCATTGTTTTGTTTTGTTTGAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGGTTTTGCTTATTTGGTTGTTTTGCATTGTTTTGTTTTGTTTGAC  739

seq1  TTGAATATTTAGTATATAGAATAAAAGATTAGAATTCATGATGGTAACTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATATTTAGTATATAGAATAAAAGATTAGAATTCATGATGGTAACTT  789

seq1  ACTGCAGAGGGTATATCCAATTAGTAATGATTAAGGACACAACTTTTAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGAGGGTATATCCAATTAGTAATGATTAAGGACACAACTTTTAAG  839

seq1  TTGTGGTGGTGTTGATTCTGTGTTACTGGGTCATTAGTAAATGGTATCAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGTGGTGTTGATTCTGTGTTACTGGGTCATTAGTAAATGGTATCAC  889

seq1  CAGCCACTGAATCCAGTATTAACAAAAGCTGCTATACTTGTCTTGCACAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCACTGAATCCAGTATTAACAAAAGCTGCTATACTTGTCTTGCACAG  939

seq1  ATCTCCTAAACAGCTATCAATGACTCGACAAATAAAGAAAAATGTGACAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTAAACAGCTATCAATGACTCGACAAATAAAGAAAAATGTGACAC  989

seq1  ACACATAAGAAGGAATATTATTCTACCATTGGAGGCCTTGTGAATTC  1046
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATAAGAAGGAATATTATTCTACCATTGGAGGCCTTGTGAATTC  1036