BAC Information

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BAC

Clone NameB6Ng01-144P15
Chromosome8 (Build37)8 (Build37)
Map Location 73,726,538 - 73,727,19774,171,821 - 74,172,923
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSlc25a42, Armc6, Sfrs14, Homer3, Ddx49, Cope, Lass1, Upf1, Comp, Crtc1, Klhl26, Tmem59l, Crlf1, 2810428I15Rik, Uba52, Fkbp8, Ell, Isyna1, Ssbp4, Lrrc25, Gdf15, Pgpep1, Lsm4, Jund1, 2410018E23Rik, LOC100041434, Pde4c, Rab3a, BC051227, Ifi30, Pik3r2, LOC100041971, Mast3, Il12rb1, Arrdc2, Kcnn1, LOC100042011, Ccdc124, Slc5a5, Rpl18a, Snora68, Mtap1s, LOC100042057, LOC665858, LOC384645
Downstream geneLOC100041583, EG621377, 2410004L22Rik, Myo9b, 2010315L10Rik, Ocel1, Nr2f6, Ushbp1, 5430437P03Rik, Ankrd41, Abhd8, Mrpl34, 1500034J01Rik, Tmem16h, Gtpbp3, Plvap, LOC665928, Bst2, 1110012M11Rik, BC033932, Txnl6, Slc27a1, Pgls, Bcnp1, Glt25d1, Unc13a, Jak3, Insl3, B3gnt3, LOC100042289, Fcho1, EG665991, LOC665996, LOC385024, LOC675190, Zfp709, LOC670453, Zfp617, BC049349, Cyp4f18, LOC666033, Olfr372, Olfr373, Olfr374, Tpm4, Rab8a, Hsh2d
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144P15.bB6Ng01-144P15.g
ACCDH942512DH942513
length9481,099
definitionDH942512|Mus musculus domesticus DNA, BAC clone: B6Ng01-144P15, 5' end.DH942513|Mus musculus domesticus DNA, BAC clone: B6Ng01-144P15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(73,726,538 - 73,727,197)(74,171,821 - 74,172,923)
sequence
gaattctttacgaatggatcacaaagacccattcctctaacttttcttcc
tctaaatcatgccaactacccatcatctgacacaagtaggaatttcctgt
gaacacatcaatgaacaaataaaacaggtcaactcactctgaaaatccag
agaggaaacagacaccaagtgtcttagttagggttttactgctgtaaaca
gacaccatgaccaaagcaagtcttaaaaaacaacaacaacaacaacaaca
acatttgattggggctagcttacaggttcagaggttcagtccattatcat
caaggtgggagcatggcagcatccaggctgtcatggtgcaggcagagctg
agagttctacatcttcatccaaagctgctagtggaagactgacttccagg
caactagggtgaggattttatgcccacacccacagtgacacacctactcc
aaccaggtcacacctattccaacaaggccacacctccaaatggtgccact
ccctggcccaagaatatactaaccatcacattccactccctggccccctc
agacttttcaaacacatgagtctatgggggggggtgggcatacttaaaca
tagcatgatgcaaaatgcacttagtccaactttcaaagtcctcacagtat
atagcaatttcaacaatgttaaaagtccaaagttcaaggtctctcctgag
attcatccaatcacttaactgtaatccccaaagaaagacaggaatctagc
tgggcaaattccaaactctgcatctccatggctgatgtcaaagctgtctt
cagatctccactcctttttcatctttgttgactacaacaaactgctttct
cctgggctggttccactccctgttagcagctttccccagcatgtatccca
tggcctcttgcacctttaacgtctttgagtctccaaggcagtttcaat
gaattcttatcctcctcgatgatagacacgatgagggtgatcagcttgga
ccagaaatccaggttcttgatgctagggccttgctcctctgggggaacct
cccccttcttggcctgaaaggggagaaagggacaattcgtagcagttagg
gtgtcaggggtactgcaggccacactcttgcaccacagacttgggaccaa
atgggcttcatggtaagactctcatttcaaacaaacaaactgaaaaagga
cgaaaaactgaaagaaattcaatccaagccagtatcttttcttttctgaa
gcagaaacttaagatgtagcccaggctggcctggaacagtccatcctcac
gtctcagtgtcctgagggccaggctggcatagggataggctgtctttcta
caccatgcgggtctcatggacgaaccacaggtaaccaggtttggtggcaa
gccctagcctgccctcttacctctcaccagctttcaaatctttcttttta
agatttctttgactttatacgtatgtttgcgtgtctgtatgtacaccatg
tgcatgtgggtgcccaaggaggccagaggcactgcagttataggtggctg
tgggccaccatgtgggtgctgggaatcaaactctagtcctctggaggagc
agtaagtactcttaaccactgaacttaactctaacagaccagactcactg
aaccttttgcaaatagaaactttctactaaccataaggctttaagccaaa
ctcagagagctcattcttgactgcctgctgtgtgcttggtgctgtgtgct
cggtactgagtgcttggtgctgtgtgctcagtgctgtgtgttctgtgctg
agtgcttggtgctaagtgccctatgctgtgtgttctgtcagtctgatttc
agaagacacactgagggtctgagcacagcatgtccagggctcctgtgaag
gtgaagtcccatccaagtctcaacggatccgtttggtactcccggccata
gaagctcatggcagttgtgaagaatgtacctcataagtgagttgaggcag
ctttccacaagtcttttcacatactggctgcacgcggcggctctgcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_73726538_73727197
seq2: B6Ng01-144P15.b_50_716

seq1  GAATTCTTTATGAATGGATCACAAAGACCCATTCCTCTAACTTTTCTTCC  50
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTACGAATGGATCACAAAGACCCATTCCTCTAACTTTTCTTCC  50

seq1  TCTAAATCATGCCAACTACCCATCATCTGACACAAGTAGGAATTTCCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATCATGCCAACTACCCATCATCTGACACAAGTAGGAATTTCCTGT  100

seq1  GAACACATCAATGAACAAATAAAACAGGTCAACTCACTCTCTGAAAATCC  150
      ||||||||||||||||||||||||||||||||||||  ||||||||||||
seq2  GAACACATCAATGAACAAATAAAACAGGTCAACTCA--CTCTGAAAATCC  148

seq1  AGAGAGGAAACAGACACCAAGTGTCTTAGTTAGGGTTTTACTGCTGTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGAAACAGACACCAAGTGTCTTAGTTAGGGTTTTACTGCTGTAAA  198

seq1  CAGACACCATGACCAAAGCAAGTCTTAAAAA--AAAAACAACAACAACAA  248
      |||||||||||||||||||||||||||||||  || ||||||||||||||
seq2  CAGACACCATGACCAAAGCAAGTCTTAAAAAACAACAACAACAACAACAA  248

seq1  CAACATTTGATTGGGGCTAGCTTACAGGTTCAGAGGTTCAGTCCATTATC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTTGATTGGGGCTAGCTTACAGGTTCAGAGGTTCAGTCCATTATC  298

seq1  ATCAAGGTGGGAGCATGGCAGCATCCAGGCTGTCATGGTGCAGGCAAAGC  348
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATCAAGGTGGGAGCATGGCAGCATCCAGGCTGTCATGGTGCAGGCAGAGC  348

seq1  TGAGAGTTCTACGTCTTCATCCAAAGCTGCTAGTGGAAGACTGACTTCCA  398
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTTCTACATCTTCATCCAAAGCTGCTAGTGGAAGACTGACTTCCA  398

seq1  GGCAACTAGGGTGAGGATTTTATGCCCACACCCACAGTGACACACCTACT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACTAGGGTGAGGATTTTATGCCCACACCCACAGTGACACACCTACT  448

seq1  CCAA-CAGGTCACACCT-TTCCAACAAGGCCACACCTCCAAATGGTGCCA  496
      |||| |||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCAACCAGGTCACACCTATTCCAACAAGGCCACACCTCCAAATGGTGCCA  498

seq1  CTCCCTGGCCCAAGAATATACTAACCATCACATTCCACTCCCTGGCCCCC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGGCCCAAGAATATACTAACCATCACATTCCACTCCCTGGCCCCC  548

seq1  TCAGACTTTTCAAACACATGAGTCTATGGGGG-----GGCCATACTTAAA  591
      ||||||||||||||||||||||||||||||||     || ||||||||||
seq2  TCAGACTTTTCAAACACATGAGTCTATGGGGGGGGGTGGGCATACTTAAA  598

seq1  CATAGCATGATGCAAAATGCACTTAGTCCAACTTTCAAAGTCCTCATAGT  641
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CATAGCATGATGCAAAATGCACTTAGTCCAACTTTCAAAGTCCTCACAGT  648

seq1  ATATAGCAATCTCAACAAT  660
      |||||||||| ||||||||
seq2  ATATAGCAATTTCAACAAT  667

seq1: chr8_74171821_74172923
seq2: B6Ng01-144P15.g_69_1167

seq1  GAATTCTTATCCTCCTCGATGATAGACACGATGAGGGTGATCAGCTTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATCCTCCTCGATGATAGACACGATGAGGGTGATCAGCTTGGA  50

seq1  CCAGAAATCCAGGTTCTTGATGCTAGGGCCTTGCTCCTCTGGGGGAACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATCCAGGTTCTTGATGCTAGGGCCTTGCTCCTCTGGGGGAACCT  100

seq1  CCCCCTTCTTGGCCTGAAAGGGGAGAAAGGGACAATTCGTAGCAGTTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTTCTTGGCCTGAAAGGGGAGAAAGGGACAATTCGTAGCAGTTAGG  150

seq1  GTGTCAGGGGTACTGCAGGCCACACTCTTGCACCACAGACTTGGGACCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAGGGGTACTGCAGGCCACACTCTTGCACCACAGACTTGGGACCAA  200

seq1  ATGGGCTTCATGGTAAGACTCTCATTTCAAACAAACAAACTGAAAAAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTTCATGGTAAGACTCTCATTTCAAACAAACAAACTGAAAAAGGA  250

seq1  CGAAAAACTGAAAGAAATTCAATCCAAGCCAGTATCTTTTCTTTTCTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAAACTGAAAGAAATTCAATCCAAGCCAGTATCTTTTCTTTTCTGAA  300

seq1  GCAGAAACTTAAGATGTAGCCCAGGCTGGCCTGGAACAGTCCATCCTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAACTTAAGATGTAGCCCAGGCTGGCCTGGAACAGTCCATCCTCAC  350

seq1  GTCTCAGTGTCCTGAGGGCCAGGCTGGCATAGGGATAGGCTGTCTTTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGTGTCCTGAGGGCCAGGCTGGCATAGGGATAGGCTGTCTTTCTA  400

seq1  CACCATGCGGGTCTCATGGACGAACCACAGGTAACCAGGTTTGGTGGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATGCGGGTCTCATGGACGAACCACAGGTAACCAGGTTTGGTGGCAA  450

seq1  GCCCTAGCCTGCCCTCTTACCTCTCACCAGCTTTCAAATCTTTCTTTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTAGCCTGCCCTCTTACCTCTCACCAGCTTTCAAATCTTTCTTTTTA  500

seq1  AGATTTCTTTGACTTTATACGTATGTTTGCGTGTCTGTATGTACACCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCTTTGACTTTATACGTATGTTTGCGTGTCTGTATGTACACCATG  550

seq1  TGCATGTGGGTGCCCAAGGAGGCCAGAGGCACTGCAGTTATAGGTGGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTGGGTGCCCAAGGAGGCCAGAGGCACTGCAGTTATAGGTGGCTG  600

seq1  TGGGCCACCATGTGGGTGCTGGGAATCAAACTCTAGTCCTCTGGAGGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCACCATGTGGGTGCTGGGAATCAAACTCTAGTCCTCTGGAGGAGC  650

seq1  AGTAAGTACTCTTAACCACTGAACTTAACTCTAACAGACCAGACTCACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGTACTCTTAACCACTGAACTTAACTCTAACAGACCAGACTCACTG  700

seq1  AACCTTTTGCAAATAGAAACTTTCTACTAACCATAAGGCTTTAAGCCAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTTGCAAATAGAAACTTTCTACTAACCATAAGGCTTTAAGCCAAA  750

seq1  CTCAGAGAGCTCATTCTTGACTGCCTGCTGTGTGCTTGGTGCTGTGTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGAGCTCATTCTTGACTGCCTGCTGTGTGCTTGGTGCTGTGTGCT  800

seq1  CGGTACTGAGTGCTTGGTGCTGTGTGCTCAGTGCTGTGTGTTCTGTGCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTACTGAGTGCTTGGTGCTGTGTGCTCAGTGCTGTGTGTTCTGTGCTG  850

seq1  AGTGCTTGGTGCTAAGTGCCCTATGCTGTGTGTTCTGTCAGTCTGAATTC  900
      ||||||||||||||||||||||||||||||||||||||||||||| ||| 
seq2  AGTGCTTGGTGCTAAGTGCCCTATGCTGTGTGTTCTGTCAGTCTG-ATTT  899

seq1  CAGAAGACAACACTGAGGGTCTGAGCACAGCATGTCCCAGGGCTCCTGTG  950
      |||||||| |||||||||||||||||||||||||| ||||||||||||||
seq2  CAGAAGAC-ACACTGAGGGTCTGAGCACAGCATGT-CCAGGGCTCCTGTG  947

seq1  AAGGTGAAGTCCCATCCAAGTCTCACCGGATCCGTTTGGTACTCCCGGCC  1000
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAGGTGAAGTCCCATCCAAGTCTCAACGGATCCGTTTGGTACTCCCGGCC  997

seq1  ATAG-AGCTCATGGCAGTTGTTGAAG-ATGTA-CTCATAGGTGGAGTTGA  1047
      |||| ||||||||||||||| ||||| ||||| |||||| || |||||||
seq2  ATAGAAGCTCATGGCAGTTG-TGAAGAATGTACCTCATAAGT-GAGTTGA  1045

seq1  GGCAGGCCTTCACACAGTC-TTTCACTACCTGGCTGGCACGCGGCGGGCT  1096
      |||||   | |||| |||| ||||||   |||||| ||||||||| ||||
seq2  GGCAGCTTTCCACA-AGTCTTTTCACATACTGGCT-GCACGCGGC-GGCT  1092

seq1  CTGCAGT  1103
      |||||||
seq2  CTGCAGT  1099