BAC Information

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BAC

Clone NameB6Ng01-145D12
Chromosome8 (Build37)
Map Location 19,871,097 - 19,879,765
singlet/doubletdoublet
Overlap geneLOC547150
Upstream geneAgpat5, LOC100040486, Xkr5, Defb40, Defb37, Defb38, Defb39, Defb12, Defb34, EG546038, Spag11, Defb14, Defb4, EG654452, Defb6, EG574081, Defb5, Defb3, Defb54-ps, LOC100040504, LOC100040514, Defb8, LOC100040528, LOC100041511, Defb7, LOC670326, LOC100040561, LOC624198, EG665730, 4930467E23Rik, LOC100041567
Downstream geneLOC100040599, EG665822, 6820431F20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145D12.bB6Ng01-145D12.g
ACCDH942687DH942688
length1,059934
definitionDH942687|Mus musculus domesticus DNA, BAC clone: B6Ng01-145D12, 5' end.DH942688|Mus musculus domesticus DNA, BAC clone: B6Ng01-145D12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,878,712 - 19,879,765)(19,871,097 - 19,872,031)
sequence
gaattcactatgaaagtcagattagatcaaagtagcctctgacttcttaa
aatttctgtgatccttctgtgcctgtctacagagctctggattccatacc
tgtacccctcccacacacataccttagtcattcatttcttcattgattat
tttgattaccatcatcatttcctgaggtctgccttgtctttccttccatc
tcacagactatgacataagattcctcttattttccatttgtgcttaagtc
ttggtttatgctgtggttggccaactgtaatggttatggaattctggtgt
ttttttttttccatggtatcctatcttctccattcttaaaatagaagctt
ttgctttagtattcaattcagtcaccatatcctttaagcatcctctcttt
gctgtgctggcctctggcatccttgctgtggatgcacacatatgatcaat
gaataatagagtttctgggttctagacattgtattagtggctttatattc
ccatttctcttgatcattgcagcaacctttcaacgaatattattcttatc
tacatttctgaaatgagcaagctgggttcagagaaagctgtcagctttcc
caaagctgacaagtggtaaactgatactcaaaccacatgtttgctaaatg
aaaacgaaacaataggtggatggaggctgcagctaatctcatctctttct
ctgcttgcagaagctgactgcagaggtgaacaaccctggtgtgatgtcct
cagtgagtgaagatattccattccagaggaggtctacttgatacatctgg
gaggctgccatccaaaagaaagccactctgttggtgtaggaagtgacagc
tacattctcctgtgcctactgcataaccaaaaatgaaggagaaatactgt
ttacaagctgccctggtatgcctggtatgttagccctggagcatgaagcc
accttgcatccctctttcatggacaccatgagagggcaagaagggcaaga
tgctgcaacgcttcaagagagttgggtctggaatcagttctttgtgatag
acgagtaca
gaattctattttttaagaattttttaaaattctaaaacaaaaattctaat
attgaaggagttatcaaatatttctatttgacctatatacccagaactca
ttagtaactattatcttgatttcatagttgacgaaatgataaattaggaa
gggatacaaaggagcactggttcacacagctttctgatgacaaagacaat
aatttcatatgtagagtagaaagtctgagaactgccatagtctccaaagt
gtcctgtaaggagcaaaagtccacctgggttatcagtttggatgactagc
ttcctctgcttcttccatcctttcttctcattagaattcacatctgagga
tagtgtagtcaagggaccagacaagaataagtaaaaggaaggaaggagac
aatgactcagcctggctttttctcagtaaaagaagatcttatgggataga
tccccaggtggggcagtctctgaatggtccttccttcagtctcagttctg
aactctgtctctgtaactccttccatggatattttgttcccccttcgaag
aaggaacgaagtatccacactttggtcttccttcttcttgagtttcatga
cttctgcaaaattgtatattgggtattctaaactattgcaacaagatttt
gctgacaggaccctgatatagcagtctcctgtgaggctatgtcagtgcct
ggtaaatacagaagtggatgctcacagtcatctattggatggaacacagg
gtccccaatgaaggagctagagaaagtacccaagaagctgaggagtctgc
agccctataggagaaacaacaatatgaactaaccagtactccccagagct
cgtgtctctagtggcatacgtagcagaggatggcctaatcggccatcagt
agtaggagaggtccttgatcttgcgaggattcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_19878712_19879765
seq2: B6Ng01-145D12.b_48_1106 (reverse)

seq1  TGTACTCGTCTATCACAAAGAACTGATTCCAGACCCAACCTCTCTTGGAG  50
      |||||||||||||||||||||||||||||||||||||| |||||||| ||
seq2  TGTACTCGTCTATCACAAAGAACTGATTCCAGACCCAA-CTCTCTTGAAG  49

seq1  CGTTGCAGCATCTGCCCCTCCTTGCCCTTCTCATGGTGTCCATGGAAAGA  100
      |||||||||||||  |||| ||||||| ||||||||||||||| ||||||
seq2  CGTTGCAGCATCTTGCCCTTCTTGCCC-TCTCATGGTGTCCAT-GAAAGA  97

seq1  GGGATGC-AGGTGGCTTCATTGCTCCAGGGCAAACATACCAGGCATACCA  149
      ||||||| ||||||||||| ||||||||||| ||||||||||||||||||
seq2  GGGATGCAAGGTGGCTTCA-TGCTCCAGGGCTAACATACCAGGCATACCA  146

seq1  GGGCAGCTTGTAAACAGTAGTTCTCCTTCATTTTTGGTTATGCAGTAGGC  199
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GGGCAGCTTGTAAACAGTATTTCTCCTTCATTTTTGGTTATGCAGTAGGC  196

seq1  ACAGGAGAATGCAGCTGTCACTTCCTACACCAACAGAGTGGCTTTCTTTT  249
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGAATGTAGCTGTCACTTCCTACACCAACAGAGTGGCTTTCTTTT  246

seq1  GGATGGCGGCCTCCCAGATGT--------GACCTCCTCTGGAATGGAGTA  291
      ||||||| |||||||||||||        |||||||||||||||||| ||
seq2  GGATGGCAGCCTCCCAGATGTATCAAGTAGACCTCCTCTGGAATGGAATA  296

seq1  TCTTCACTCACTGAGGACATCACACCAGGGTTGTTCACCTCTGCAGTCAG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACTCACTGAGGACATCACACCAGGGTTGTTCACCTCTGCAGTCAG  346

seq1  CTTCTGCAAGCAGAGAAAGAGATGAGATTAGCTGCAGCCTCCATCCACCT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCAAGCAGAGAAAGAGATGAGATTAGCTGCAGCCTCCATCCACCT  396

seq1  ATTGTTTCGTTTTCATTTAGCAAACATGTGGTTTGAGTATCAGTTTACCA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTCGTTTTCATTTAGCAAACATGTGGTTTGAGTATCAGTTTACCA  446

seq1  CTTGTCAGCTTTGGGAAAGCTGACAGCTTTCTCTGAACCCAGCTTGCTCA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCAGCTTTGGGAAAGCTGACAGCTTTCTCTGAACCCAGCTTGCTCA  496

seq1  TTTCAGAAATGTAGATAAGAATAATATTCGTTGAAAGGTTGCTGCAATGA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGAAATGTAGATAAGAATAATATTCGTTGAAAGGTTGCTGCAATGA  546

seq1  TCAAGAGAAATGGGAATATAAAGCCACTAATACAATGTCTAGAACCCAGA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAGAAATGGGAATATAAAGCCACTAATACAATGTCTAGAACCCAGA  596

seq1  AACTCTATTATTCATTGATCATATGTGTGCATCCACAGCAAGGATGCCAG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTATTATTCATTGATCATATGTGTGCATCCACAGCAAGGATGCCAG  646

seq1  AGGCCAGCACAGCAAAGAGAGGATGCTTAAAGGATATGGTGACTGAATTG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGCACAGCAAAGAGAGGATGCTTAAAGGATATGGTGACTGAATTG  696

seq1  AATACTAAAGCAAAAGCTTCTATTTTAAGAATGGAGAAGATAGGATACCA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTAAAGCAAAAGCTTCTATTTTAAGAATGGAGAAGATAGGATACCA  746

seq1  TGGAAAAAAAAAAACACCAGAATTCCATAACCATTACAGTTGGCCAACCA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAAAAAAAACACCAGAATTCCATAACCATTACAGTTGGCCAACCA  796

seq1  CAGCATAAACCAAGACTTAAGCACAAATGGAAAATAAGAGGAATCTTATG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATAAACCAAGACTTAAGCACAAATGGAAAATAAGAGGAATCTTATG  846

seq1  TCATAGTCTGTGAGATGGAAGGAAAGACAAGGCAGACCTCAGGAAATGAT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGTCTGTGAGATGGAAGGAAAGACAAGGCAGACCTCAGGAAATGAT  896

seq1  GATGGTAATGAAAATAATCAATGAAGAAATGAATGACTAAGGTATGTGTG  941
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTAATCAAAATAATCAATGAAGAAATGAATGACTAAGGTATGTGTG  946

seq1  TGGGAGGGGTACAGGTATGGAATCCAGAGCTCTGTAGACAGGCACAGAAG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGGGTACAGGTATGGAATCCAGAGCTCTGTAGACAGGCACAGAAG  996

seq1  GATCACAGAAATTTTAAGAAGTCAGAGGCTAGTTTGATCTAATCTGACTT  1041
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GATCACAGAAATTTTAAGAAGTCAGAGGCTACTTTGATCTAATCTGACTT  1046

seq1  TCATAGTGAATTC  1054
      |||||||||||||
seq2  TCATAGTGAATTC  1059

seq1: chr8_19871097_19872031
seq2: B6Ng01-145D12.g_69_1002

seq1  GAATTCTATTTTTTAAGAATTTTTTAAAATTCTAAAACAAAAATTCTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTTTTTAAGAATTTTTTAAAATTCTAAAACAAAAATTCTAAT  50

seq1  ATTGAAGGAGTTATCAAATATTTCTATTTGACCTATATACCCAGAACTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGGAGTTATCAAATATTTCTATTTGACCTATATACCCAGAACTCA  100

seq1  TTAGTAACTATTATCTTGATTTCATAGTTGACGAAATGATAAATTAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAACTATTATCTTGATTTCATAGTTGACGAAATGATAAATTAGGAA  150

seq1  GGGATACAAAGGAGCACTGGTTCACACAGCTTTCTGATGACAAAGACAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATACAAAGGAGCACTGGTTCACACAGCTTTCTGATGACAAAGACAAT  200

seq1  AATTTCATATGTAGAGTAGAAAGTCTGAGAACTGCCATAGTCTCCAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCATATGTAGAGTAGAAAGTCTGAGAACTGCCATAGTCTCCAAAGT  250

seq1  GTCCTGTAAGGAGCAAAAGTCCACCTGGGTTATCAGTTTGGATGACTAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGTAAGGAGCAAAAGTCCACCTGGGTTATCAGTTTGGATGACTAGC  300

seq1  TTCCTCTGCTTCTTCCATCCTTTCTTCTCATTAGAATTCACATCTGAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTGCTTCTTCCATCCTTTCTTCTCATTAGAATTCACATCTGAGGA  350

seq1  TAGTGTAGTCAAGGGACCAGACAAGAATAAGTAAAAGGAAGGAAGGAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTAGTCAAGGGACCAGACAAGAATAAGTAAAAGGAAGGAAGGAGAC  400

seq1  AATGACTCAGCCTGGCTTTTTCTCAGTAAAAGAAGATCTTATGGGATAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTCAGCCTGGCTTTTTCTCAGTAAAAGAAGATCTTATGGGATAGA  450

seq1  TCCCCAGGTGGGGCAGTCTCTGAATGGTCCTTCCTTCAGTCTCAGTTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGGTGGGGCAGTCTCTGAATGGTCCTTCCTTCAGTCTCAGTTCTG  500

seq1  AACTCTGTCTCTGTAACTCCTTCCATGGATATTTTGTTCCCCCTTCGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGTCTCTGTAACTCCTTCCATGGATATTTTGTTCCCCCTTCGAAG  550

seq1  AAGGAACGAAGTATCCACACTTTGGTCTTCCTTCTTCTTGAGTTTCATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACGAAGTATCCACACTTTGGTCTTCCTTCTTCTTGAGTTTCATGA  600

seq1  CTTCTGCAAAATTGTATATTGGGTATTCTAAACTATTGCAACAAGATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCAAAATTGTATATTGGGTATTCTAAACTATTGCAACAAGATTTT  650

seq1  GCTGACAGGACCCTGATATAGCAGTCTCCTGTGAGGCTATGTCAGTGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACAGGACCCTGATATAGCAGTCTCCTGTGAGGCTATGTCAGTGCCT  700

seq1  GGTAAATACAGAAGTGGATGCTCACAGTCATCTATTGGATGGAACACAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAATACAGAAGTGGATGCTCACAGTCATCTATTGGATGGAACACAGG  750

seq1  GTCCCCAATGAAGGAGCTAGAGAAAGTACCCAAGAAGCTGAAGGAGTCTG  800
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GTCCCCAATGAAGGAGCTAGAGAAAGTACCCAAGAAGCTG-AGGAGTCTG  799

seq1  CAGCCCTATAGGAGAAACAACAATATGAACTAACCAGTACTCCCCAGAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCTATAGGAGAAACAACAATATGAACTAACCAGTACTCCCCAGAGC  849

seq1  TCGTGTCTCTAGTGGCATACGTAGCAGAGGATGGCCTAATCGGCCATCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGTCTCTAGTGGCATACGTAGCAGAGGATGGCCTAATCGGCCATCAG  899

seq1  TAGTAGGAGAGGTCCTTGATCTTGCGAGGATTCTA  935
      |||||||||||||||||||||||||||||||||||
seq2  TAGTAGGAGAGGTCCTTGATCTTGCGAGGATTCTA  934