BAC Information

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BAC

Clone NameB6Ng01-145D21
Chromosome8 (Build37)
Map Location 27,725,019 - 27,873,163
singlet/doubletdoublet
Overlap genenone
Upstream geneWhsc1l1, Ppapdc1, Bag4, Lsm1, Star, Ash2l, Kcnu1, Hgsnat, 4930444A02Rik, Fnta, Hook3, 1700047A11Rik, Rnf170, Thap1
Downstream geneZfp703, Erlin2, Prosc, Gpr124, Brf2, Rab11fip1, Got1l1, Adrb3, Eif4ebp1, LOC732482, Tex24, Chrnb3, Chrna6, 4921537P18Rik, Gm1698
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145D21.bB6Ng01-145D21.g
ACCDH942703DH942704
length1,001696
definitionDH942703|Mus musculus domesticus DNA, BAC clone: B6Ng01-145D21, 5' end.DH942704|Mus musculus domesticus DNA, BAC clone: B6Ng01-145D21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,725,019 - 27,725,886)(27,872,472 - 27,873,163)
sequence
gaattcaataaagagacagaagtactgaaaaaaatcaatctgaaatactg
gaaatgaacaattcaagaagtcaaataaaaaattccatgaaaagcctcac
cagtatagaggactaaggggagccagaatatgtgtccttggtgacaaagt
caatgaattgaagatctcagacagattctttaaaagacaattggtaagac
attacacatcaaagactagagagctaccagacactatttttaaaatatca
aatatatatatatatatatatatatatggaaaaaagttcatgctaaagac
atagaaattatcttcagtaaaaccacaactggaaacttaccaaatctagg
gaaattggtacaggggcaatttggaaccataagtagatgccactatctta
catctgacaaaataagatttcaaactaacactatccaaagagataaagct
cacttcatccttattaaatgaaggaatcatcaattagacatcacaaatct
aagcatatatgtgctaaaaattgagttgctctagtttcccttctgatgct
gtaataacactctgataaaaaacaacttagaatagaaattatttattcaa
tttatatttccaggttactctccatcactgagggaagtcagggtaggagc
tcaggtagaaccctgaggcagaaactattgagcaactgtgattactagct
cactcccaaactcttgcttggttaatctttcttatatagctcacgatcac
tgggctggctagttttatgtcaacttgaaacaagctatagtcatctaaga
ggagggagctttaattgagaaaattcctctataagatggggtacaggaat
tcctatagggcattttcttaattagtgattgatggggagggcccagctca
ttgtgggtggtgccattcctaggaaaatggtactgaattctatagaaagc
agctagcagtcagagaagcaagccagtaagcagcactctctatgacccct
g
gaattctctctcttgctttgaaaagacgaattttcaaattggaaaaaaaa
cagtcaggcaggatagacacaggcaggggcttgtttcttttgggtgtgaa
tagcagtgctaaagtgatgctcttcagtgtgttggcacaccgaagtgagc
tatcaagactctctgaatgacatcttagaggtttcgtcataaaatgataa
gataggaaatgaagaaagttacatgccacatgccctcctcccccgcccca
caggggcagatcctgccttaaataagcttgtaccttagaaaaacgcagat
tgtatttacaatatgtagggatatatgacttattttcctctctgagtcat
gtagaacaggtagaaatggccaggacaagctaattaaaaatagtgtctga
agatgaaggtgtgtgtcctggtgtgtgtgtgtgtgtgtgtgtgtgtgtgc
gatggaaagaggaacttcagctgagaaaatgcctctatctgaatgcctgt
aggcaagtatagggcattctcttgactgaaggttgatgtcagagaaccca
gttcactgtgtgtagtactcatttgggcaggtcctggagtgtctacagaa
acagagaaagccaggggaatggagagagtaaagcagcattcctcaatggc
tgttgcttcagttcctacctccatattttgcggtgggtttgtatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_27725019_27725886
seq2: B6Ng01-145D21.b_47_914

seq1  GAATTCAATAAAGAGACAGAAGTACTGAAAAAAATCAATCTGAAATACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAAAGAGACAGAAGTACTGAAAAAAATCAATCTGAAATACTG  50

seq1  GAAATGAACAATTCAAGAAGTCAAATAAAAAATTCCATGAAAAGCCTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAACAATTCAAGAAGTCAAATAAAAAATTCCATGAAAAGCCTCAC  100

seq1  CAGTATAGAGGACTAAGGGGAGCCAGAATATGTGTCCTTGGTGACAAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATAGAGGACTAAGGGGAGCCAGAATATGTGTCCTTGGTGACAAAGT  150

seq1  CAATGAATTGAAGATCTCAGACAGATTCTTTAAAAGACAATTGGTAAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAATTGAAGATCTCAGACAGATTCTTTAAAAGACAATTGGTAAGAC  200

seq1  ATTACACATCAAAGACTAGAGAGCTACCAGACACTATTTTTAAAATATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACACATCAAAGACTAGAGAGCTACCAGACACTATTTTTAAAATATCA  250

seq1  AATATATATATATATATATATATATATGGAAAAAAGTTCATGCTAAAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATATATATATATATATATATATGGAAAAAAGTTCATGCTAAAGAC  300

seq1  ATAGAAATTATCTTCAGTAAAACCACAACTGGAAACTTACCAAATCTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAATTATCTTCAGTAAAACCACAACTGGAAACTTACCAAATCTAGG  350

seq1  GAAATTGGTACAGGGGCAATTTGGAACCATAAGTAGATGCCACTATCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTGGTACAGGGGCAATTTGGAACCATAAGTAGATGCCACTATCTTA  400

seq1  CATCTGACAAAATAAGATTTCAAACTAACACTATCCAAAGAGATAAAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGACAAAATAAGATTTCAAACTAACACTATCCAAAGAGATAAAGCT  450

seq1  CACTTCATCCTTATTAAATGAAGGAATCATCAATTAGACATCACAAATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCATCCTTATTAAATGAAGGAATCATCAATTAGACATCACAAATCT  500

seq1  AAGCATATATGTGCTAAAAATTGAGTTGCTCTAGTTTCCCTTCTGATGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATATATGTGCTAAAAATTGAGTTGCTCTAGTTTCCCTTCTGATGCT  550

seq1  GTAATAACACTCTGATAAAAAACAACTTAGAATAGAAATTATTTATTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAACACTCTGATAAAAAACAACTTAGAATAGAAATTATTTATTCAA  600

seq1  TTTATATTTCCAGGTTACTCTCCATCACTGAGGGAAGTCAGGGTAGGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATTTCCAGGTTACTCTCCATCACTGAGGGAAGTCAGGGTAGGAGC  650

seq1  TCAGGTAGAACCCTGAGGCAGAAACTATTGAGCAACTGTGATTACTAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTAGAACCCTGAGGCAGAAACTATTGAGCAACTGTGATTACTAGCT  700

seq1  CACTCCCAAACTCTTGCTTGGTTAATCTTTCTTATATAGCTCAGGATCAC  750
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CACTCCCAAACTCTTGCTTGGTTAATCTTTCTTATATAGCTCACGATCAC  750

seq1  TGGGCTGGCTAGTTTTATGTCAACTTGAAACAAGCTATAGTCATCTAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTGGCTAGTTTTATGTCAACTTGAAACAAGCTATAGTCATCTAAGA  800

seq1  GGAGGGAGCTTTAATTGAGAAAATTCCTCTATAAGATGGGGTACAGGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAGCTTTAATTGAGAAAATTCCTCTATAAGATGGGGTACAGGAAT  850

seq1  TCCTATAGGGCATTTTCT  868
      ||||||||||||||||||
seq2  TCCTATAGGGCATTTTCT  868

seq1: chr8_27872472_27873163
seq2: B6Ng01-145D21.g_67_762 (reverse)

seq1  ATATACAAA-CCACCGC-AAATATGGAGGTAGGAACTGAAGCAACAGCCA  48
      ||||||||| ||||||| ||||||||||||||||||||||||||||||||
seq2  ATATACAAACCCACCGCAAAATATGGAGGTAGGAACTGAAGCAACAGCCA  50

seq1  TTGAGGAATGCTGC-TTACTCTCTCCATTCCCCTGGCTTTCTCTGTTTCT  97
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTGAGGAATGCTGCTTTACTCTCTCCATTCCCCTGGCTTTCTCTGTTTCT  100

seq1  GTAGACACTCCAGGACCTGCCC-AATGAGTACTACACACAGTGAACTGGG  146
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GTAGACACTCCAGGACCTGCCCAAATGAGTACTACACACAGTGAACTGGG  150

seq1  TTCTCTGACATCAACCTTCAGTCAAGAGAATGCCCTATACTTGCCTACAG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGACATCAACCTTCAGTCAAGAGAATGCCCTATACTTGCCTACAG  200

seq1  GCATTCAGATAGAGGCATTTTCTCAGCTGAAGTTCCTCTTTCCATCGCAC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCAGATAGAGGCATTTTCTCAGCTGAAGTTCCTCTTTCCATCGCAC  250

seq1  ACACACACACACACACACACACACACCAGGACACACACCTTCATCTTCAG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACCAGGACACACACCTTCATCTTCAG  300

seq1  ACACTATTTTTAATTAGCTTGTCCTGGCCATTTCTACCTGTTCTACATGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTATTTTTAATTAGCTTGTCCTGGCCATTTCTACCTGTTCTACATGA  350

seq1  CTCAGAGAGGAAAATAAGTCATATATCCCTACATATTGTAAATACAATCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGAGGAAAATAAGTCATATATCCCTACATATTGTAAATACAATCT  400

seq1  GCGTTTTTCTAAGGTACAAGCTTATTTAAGGCAGGATCTGCCCCTGTGGG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTTTTTCTAAGGTACAAGCTTATTTAAGGCAGGATCTGCCCCTGTGGG  450

seq1  GCGGGGGAGGAGGGCATGTGGCATGTAACTTTCTTCATTTCCTATCTTAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGGGAGGAGGGCATGTGGCATGTAACTTTCTTCATTTCCTATCTTAT  500

seq1  CATTTTATGACGAAACCTCTAAGATGTCATTCAGAGAGTCTTGATAGCTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTATGACGAAACCTCTAAGATGTCATTCAGAGAGTCTTGATAGCTC  550

seq1  ACTTCGGTGTGCCAACACACTGAAGAGCATCACTTTAGCACTGCTATTCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCGGTGTGCCAACACACTGAAGAGCATCACTTTAGCACTGCTATTCA  600

seq1  CACCCAAAAGAAACAAGCCCCTGCCTGTGTCTATCCTGCCTGACTGTTTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAAAAGAAACAAGCCCCTGCCTGTGTCTATCCTGCCTGACTGTTTT  650

seq1  TTTTCCAATTTGAAAATTCGTCTTTTCAAAGCAAGAGAGAGAATTC  692
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAATTTGAAAATTCGTCTTTTCAAAGCAAGAGAGAGAATTC  696