BAC Information

Click to search

BAC

Clone NameB6Ng01-145F15
Chromosome8 (Build37)
Map Location 33,168,305 - 33,313,423
singlet/doubletdoublet
Overlap gene2010007E15Rik, EG666589
Upstream geneDusp26, Rnf122, BC019943, Rbm13, Fut10, LOC666330, LOC666568, 7420700N18Rik, LOC100041329, EG330731, LOC100041340, Nrg1
Downstream geneEG546052, LOC100042715, LOC628408, EG628412
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145F15.bB6Ng01-145F15.g
ACCDH942777DH942778
length1,0871,091
definitionDH942777|Mus musculus domesticus DNA, BAC clone: B6Ng01-145F15, 5' end.DH942778|Mus musculus domesticus DNA, BAC clone: B6Ng01-145F15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,312,311 - 33,313,423)(33,168,305 - 33,169,418)
sequence
gaattcaaggctggtcggggctacactggaagttctggctcagcctggac
ttcagagtgagactgtgtctgagagagggggtagagagaatatgtccaat
aaaggagagagaaacttggtactgacttacataactgcattatgggatag
gtaacatatttggacttcaacctttggaatgaaactacccctagccctca
aagtaggatgcagcatagtaacctgattggttggacatttcgttgtcctt
ctgtattcctggggaaaagcttttccattttctgtcttcccagttctgag
ttgaacccaaacaacttcaccaatggtccaggtttatttggctttgatat
gcccctcagccaccctcttcctgacagttgctggctatgtcaactacttt
cccacagccttccttggagtcttgatcacaacactcaggatagtctatta
ttgccctggttaatacctgggcacaacctaaagccaccccagaggaggaa
acttcaataaagaaaaggcctccataagatcaggttgtagataagcctag
aaggcattttcttgattaatggttgattgggagggcccagtctgttgtgg
gtggggccatcccaggttggtggtcttgggttctataaacaagcaggctg
agcaatccatgggagcaagtcagtaagcagcaccctccatggcctatgca
tcagctcctgcctccaggttcctgtcctgcttgagttcctgtcctgactt
cctccaattatgaactgtggtatagaaagaagtataagccaaataaaccc
ttcccagcttgctttttttttttttatatttttttggtcatggggttcat
tgtggcaacagaaacctaagtaaggcaaatgtagtgatttgtttaatgta
ataatcaaattcttttaagcacaaatcaagtgacttaaagtactatgact
gattccttcacaacgctaacgaggtaggtgctatatcttggctattaggg
taaggactggagccatggcagaatacatactacttttgttacggggttaa
taagagactggttccaaacttaggactcagactcaaa
gaattcacatttgtgacaagttcccaggtggatgtttgcctgctcagggg
tgacactccgaaagccacttccccgtaggcacgtacaatttcagtgtgtt
cagatctccaatgtctttcaatcaggccccaagtggaatttttggaagac
ttttgaagcattaatctcttaaatatcagagtcctggtgatgacaacatt
tgaatgagccagcaagcacttggcagggttttgcacagacacatctgcca
gctctgttcaatgggagaacaagtgtgagtacaagtgtgagttactgatt
taaacatttaccttccataacttactacctttgtctgcagggctaagctc
acaaagtcttgactattcctcaccaaggaacacgcctacaggtctctttt
caaaaactgtggtccaggcaggccctgggccatgtcccaatgctacttgg
aactgtgaagctttgctatcgccagatgtcacacagctctgagatgtctg
aggctgccactgaggccctctgcatttctcctcctgttttcctatttcct
ggagcctacacttaaaaggccactggggaacggtttaggagacctttaaa
ccatttttcttgttgggtgtttctcaaatggtcccaaatgagataccagc
ctctcatctgcggggcttcatttgctcacacattcccccagccctcatga
tctcatttccaagggaaggctgacgttgcggttcccagtcttccgtgaat
ccctctgatttgctttggcaatgcatttactcaagcggaactttgggcac
cagacaactgccacatagtcatgaaattgaatcctttatcatttagtcat
attcatatggggtttggaatgcagagagaccgaattcatcacattgcgtg
tccttctatgggacactagaagttggatgagcatatcctttagaccaggg
tttaggagacaagaaagcttgagtgtgttgcttcgtttttctgcagtttc
gtcatgagaattagaagaagctgttcagtctgggtgatggtgggttaaac
ttggctcgatgagattttggtactatggagggctgtatatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_33312311_33313423
seq2: B6Ng01-145F15.b_46_1132 (reverse)

seq1  TTTGAGTCTGAAGTTCCTAGGTTTGGAACCCAGTTCTTCTTATTACCCGC  50
      |||||||||||   ||||| |||||||| |||||   |||||||| || |
seq2  TTTGAGTCTGA--GTCCTAAGTTTGGAA-CCAGT--CTCTTATTAACCCC  45

seq1  GTGACCAAAAGTATGTATGTAATTCTGCCATGGCTCCAGTTTCCTTACCT  100
      || | |||||||| |||||| ||||||||||||||||||  |||||||| 
seq2  GT-AACAAAAGTA-GTATGT-ATTCTGCCATGGCTCCAG--TCCTTACC-  89

seq1  CTAAATTAGCCAAGGTAATAGCACCTACCTCTGTAGCGTTGTGAAGGGAA  150
      ||||  |||||||| | ||||||||||||||  |||||||||||| ||||
seq2  CTAA--TAGCCAAGAT-ATAGCACCTACCTCGTTAGCGTTGTGAA-GGAA  135

seq1  TCAGTCAATAGTTACTTTTAAGTCACTTTGATTTGTGCTTAAAAGAATTT  200
      |||||| |||| ||| |||||||||| |||||||||||||||||||||||
seq2  TCAGTC-ATAG-TAC-TTTAAGTCAC-TTGATTTGTGCTTAAAAGAATTT  181

seq1  GATTATTACATTAAACAAATCACTACATTTGCCTTACTTAGGGTTTCTGT  250
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GATTATTACATTAAACAAATCACTACATTTGCCTTACTTA-GGTTTCTGT  230

seq1  TGCCACAATGAAACACCATGACCAAAAAAAAAAAAAAAAAAAAAAAAAAA  300
      |||||||||| ||| ||||||||     ||||||| | ||||||||||||
seq2  TGCCACAATG-AACCCCATGACC-----AAAAAAATATAAAAAAAAAAAA  274

seq1  AGCAAGCTGGGAAGGGTTTATTTGGCTTATACTTCTTTCTATACCACAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCTGGGAAGGGTTTATTTGGCTTATACTTCTTTCTATACCACAGT  324

seq1  TCATAATTGGAGGAAGTCAGGACAGGAACTCAAGCAGGACAGGAACCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATTGGAGGAAGTCAGGACAGGAACTCAAGCAGGACAGGAACCTGG  374

seq1  AGGCAGGAGCTGATGCATAGGCCATGGAGGGTGCTGCTTACTGACTTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGAGCTGATGCATAGGCCATGGAGGGTGCTGCTTACTGACTTGCT  424

seq1  CCCATGGATTGCTCAGCCTGCTTGTTTATAGAACCCAAGACCACCAACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGGATTGCTCAGCCTGCTTGTTTATAGAACCCAAGACCACCAACCT  474

seq1  GGGATGGCCCCACCCACAACAGACTGGGCCCTCCCAATCAACCATTAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGGCCCCACCCACAACAGACTGGGCCCTCCCAATCAACCATTAATC  524

seq1  AAGAAAATGCCTTCTAGGCTTATCTACAACCTGATCTTATGGAGGCCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATGCCTTCTAGGCTTATCTACAACCTGATCTTATGGAGGCCTTT  574

seq1  TCTTTATTGAAGTTTCCTCCTCTGGGGTGGCTTTAGGTTGTGCCCAGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATTGAAGTTTCCTCCTCTGGGGTGGCTTTAGGTTGTGCCCAGGTA  624

seq1  TTAACCAGGGCAATAATAGACTATCCTGAGTGTTGTGATCAAGACTCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCAGGGCAATAATAGACTATCCTGAGTGTTGTGATCAAGACTCCAA  674

seq1  GGAAGGCTGTGGGAAAGTAGTTGACATAGCCAGCAACTGTCAGGAAGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGCTGTGGGAAAGTAGTTGACATAGCCAGCAACTGTCAGGAAGAGG  724

seq1  GTGGCTGAGGGGCATATCAAAGCCAAATAAACCTGGACCATTGGTGAAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTGAGGGGCATATCAAAGCCAAATAAACCTGGACCATTGGTGAAGT  774

seq1  TGTTTGGGTTCAACTCAGAACTGGGAAGACAGAAAATGGAAAAGCTTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGGTTCAACTCAGAACTGGGAAGACAGAAAATGGAAAAGCTTTTC  824

seq1  CCCAGGAATACAGAAGGACAACGAAATGTCCAACCAATCAGGTTACTATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGAATACAGAAGGACAACGAAATGTCCAACCAATCAGGTTACTATG  874

seq1  CTGCATCCTACTTTGAGGGCTAGGGGTAGTTTCATTCCAAAGGTTGAAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATCCTACTTTGAGGGCTAGGGGTAGTTTCATTCCAAAGGTTGAAGT  924

seq1  CCAAATATGTTACCTATCCCATAATGCAGTTATGTAAGTCAGTACCAAGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATATGTTACCTATCCCATAATGCAGTTATGTAAGTCAGTACCAAGT  974

seq1  TTCTCTCTCCTTTATTGGACATATTCTCTCTACCCCCTCTCTCAGACACA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTCCTTTATTGGACATATTCTCTCTACCCCCTCTCTCAGACACA  1024

seq1  GTCTCACTCTGAAGTCCAGGCTGAGCCAGAACTTCCAGTGTAGCCCCGAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCACTCTGAAGTCCAGGCTGAGCCAGAACTTCCAGTGTAGCCCCGAC  1074

seq1  CAGCCTTGAATTC  1113
      |||||||||||||
seq2  CAGCCTTGAATTC  1087

seq1: chr8_33168305_33169418
seq2: B6Ng01-145F15.g_67_1157

seq1  GAATTCACATTTGTGACAAGTTCCCAGGTGGATGTTTGCCTGCTCAGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATTTGTGACAAGTTCCCAGGTGGATGTTTGCCTGCTCAGGGG  50

seq1  TGACACTCCGAAAGCCACTTCCCCGTAGGCACGTACAATTTCAGTGTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACTCCGAAAGCCACTTCCCCGTAGGCACGTACAATTTCAGTGTGTT  100

seq1  CAGATCTCCAATGTCTTTCAATCAGGCCCCAAGTGGAATTTTTGGAAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTCCAATGTCTTTCAATCAGGCCCCAAGTGGAATTTTTGGAAGAC  150

seq1  TTTTGAAGCATTAATCTCTTAAATATCAGAGTCCTGGTGATGACAACATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAGCATTAATCTCTTAAATATCAGAGTCCTGGTGATGACAACATT  200

seq1  TGAATGAGCCAGCAAGCACTTGGCAGGGTTTTGCACAGACACATCTGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGAGCCAGCAAGCACTTGGCAGGGTTTTGCACAGACACATCTGCCA  250

seq1  GCTCTGTTCAATGGGAGAACAAGTGTGAGTACAAGTGTGAGTTACTGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGTTCAATGGGAGAACAAGTGTGAGTACAAGTGTGAGTTACTGATT  300

seq1  TAAACATTTACCTTCCATAACTTACTACCTTTGTCTGCAGGGCTAAGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATTTACCTTCCATAACTTACTACCTTTGTCTGCAGGGCTAAGCTC  350

seq1  ACAAAGTCTTGACTATTCCTCACCAAGGAACACGCCTACAGGTCTCTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTCTTGACTATTCCTCACCAAGGAACACGCCTACAGGTCTCTTTT  400

seq1  CAAAAACTGTGGTCCAGGCAGGCCCTGGGCCATGTCCCAATGCTACTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACTGTGGTCCAGGCAGGCCCTGGGCCATGTCCCAATGCTACTTGG  450

seq1  AACTGTGAAGCTTTGCTATCGCCAGATGTCACACAGCTCTGAGATGTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGAAGCTTTGCTATCGCCAGATGTCACACAGCTCTGAGATGTCTG  500

seq1  AGGCTGCCACTGAGGCCCTCTGCATTTCTCCTCCTGTTTTCCTATTTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGCCACTGAGGCCCTCTGCATTTCTCCTCCTGTTTTCCTATTTCCT  550

seq1  GGAGCCTACACTTAAAAGGCCACTGGGGAACGGTTTAGGAGACCTTTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCTACACTTAAAAGGCCACTGGGGAACGGTTTAGGAGACCTTTAAA  600

seq1  CCATTTTTCTTGTTGGGTGTTTCTCAAATGGTCCCAAATGAGATACCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTTCTTGTTGGGTGTTTCTCAAATGGTCCCAAATGAGATACCAGC  650

seq1  CTCTCATCTGCGGGGCTTCATTTGCTCACACATTCCCCCAGCCCTCATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATCTGCGGGGCTTCATTTGCTCACACATTCCCCCAGCCCTCATGA  700

seq1  TCTCATTTCCAAGGGAAGGCTGACGTTGCGGTTCCCAGTCTTCCGTGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTTCCAAGGGAAGGCTGACGTTGCGGTTCCCAGTCTTCCGTGAAT  750

seq1  CCCTCTGATTTGCTTTGGCAATGCATTTACTCAAGCGGAACTTTGGGCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTGATTTGCTTTGGCAATGCATTTACTCAAGCGGAACTTTGGGCAC  800

seq1  CAGACAACTGCCACATAGTCATGAAATTGAATCCTTTATCATTTAGTCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAACTGCCACATAGTCATGAAATTGAATCCTTTATCATTTAGTCAT  850

seq1  ATTCATATGAGGTTTTGAAATGCAGAGAGACCGAATTCATCACATTGCGT  900
      ||||||||| || |||| ||||||||||||||||||||||||||||||||
seq2  ATTCATATG-GGGTTTGGAATGCAGAGAGACCGAATTCATCACATTGCGT  899

seq1  GTCCTTCTATGGGACACTAGAAAGTTGGATGAAGCATATCCTTTAAGAAC  950
      |||||||||||||||||||| |||||||||| |||||||||||||   ||
seq2  GTCCTTCTATGGGACACTAG-AAGTTGGATG-AGCATATCCTTTA--GAC  945

seq1  CAAGGGTTTTAAGAGACAAGAAAGCTTGAGTGTGTTGCTTTCGTTTTTCT  1000
      ||  || |||| |||||||||||||||||||||||||| |||||||||| 
seq2  CA--GGGTTTAGGAGACAAGAAAGCTTGAGTGTGTTGC-TTCGTTTTTC-  991

seq1  TGCAGGTTTTCGTCATGAGAATTAAGAAGAAAGCTGTCAAGTCTGGGTGA  1050
      |||||  |||||||||||||||| ||||| |||||||  |||||||||| 
seq2  TGCAG--TTTCGTCATGAGAATT-AGAAG-AAGCTGTTCAGTCTGGGTG-  1036

seq1  ATGGTTGGTTAAAACTTTGTCTGATGAAAAAATATTTGGGTAAACTAATG  1100
      ||||| |||| |||||| |   ||||     | |||| |||  ||| |||
seq2  ATGGTGGGTT-AAACTTGGCTCGATG-----AGATTTTGGT--ACT-ATG  1077

seq1  GAGGGCTGTATATT  1114
      ||||||||||||||
seq2  GAGGGCTGTATATT  1091