BAC Information

Click to search

BAC

Clone NameB6Ng01-145O07
Chromosome8 (Build37)
Map Location 68,635,457 - 68,802,946
singlet/doubletdoublet
Overlap geneMarch1
Upstream geneLOC665396, LOC100040949, LOC665405, Vaultrc-ps1, LOC100040967, LOC100040986
Downstream gene1810029B16Rik, Tktl2, Npy5r, Npy1r, BC053440, LOC665453
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145O07.bB6Ng01-145O07.g
ACCDH943176DH943177
length1,188994
definitionDH943176|Mus musculus domesticus DNA, BAC clone: B6Ng01-145O07, 5' end.DH943177|Mus musculus domesticus DNA, BAC clone: B6Ng01-145O07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,801,742 - 68,802,946)(68,635,457 - 68,636,449)
sequence
gaattcaaatatttgtaggttttgtcatttcctactctgtagcccacagg
attattgaagagcttatcatttagttattcataaaagtagtgaggaacaa
gcagtgcatttatcatttctgactatcattctgacataaatgcaaggaga
gttatattgagttaagagatttagattcacagaaatcaccaggggttggt
agttgagacttttctataatacaatgaaggtaagatagatattcatttat
ctccaaactgactgtcagagagtcttcaagaagtcagagatcagaagtaa
cacttttgattttatgtactttctaaaggaataatctaaaaggatgaatg
ttgtaaacacgttgcttttttcataacagcagtttgagaagaagatacac
atttgctcctagataatgaatatttggcgtgataacagagctgtcagtcc
tttgacaagcttctaagttgttacttactcaacattattctgccgacaaa
gatgacactttctgcagctatgggtgggctcattcttatgagactttgat
gacagacatttagaagatgctttgctaatataaactaaatggagaaatcc
ttcatgttactagttttgtggtaggggaagtaagtctctcttagggagtt
taggtgattatcccaagatcacatggatagggaacaacagagctgagagt
tggatttaaaatctcaccctccaaagtagtctcagctagaagggcacatt
ccctctcaaatatctttggagggactctgatatgaatgtaattcaaaacc
ttcagtaacttactgtcatattttcattactataataaatactagatgca
atgctgttatccagaaaagactattctgaactataattttgggagtgtga
agtctaggaacttctattgcttttagacttctcatggggcaggagaagga
aaacacactatatgagattggtggtggtagtaaagatgcgaaggggagcc
tgcttcaacatactctttcaagggctttcctccactagtctgccacctac
cactcacttgcatcatttaaggtctactacttctccaaagtcagccacaa
tcccggcatctggagtagtactctcactactcgattgagacctgtatgat
ctacagcaagcctatgagtcgtggttggatcatctttc
gaattccactgtctattcttgtttggttttctctgactatgaaaggcttt
tgtttgtttgtttacttgtttttttgtttttaatttctatgctgttattt
aaagcttcagacaaaagtcatgtcatcttttggtcctggatatagagata
tgcatttaaagatgtttcctgccttttcttagtgttctcagagtcagtgg
gagcagactagaagaaagattgtgccattcttacaggatacaggaggtgg
gataagcaaagcagcatgtttagacgcagaaggaagagtgagaggctagg
aaggaaggtacagagctatagatggattagcccagtattcatggcaagac
tggagatcagggaagagaagtcacaggaacatgaatttggaagagaagac
tagaaagtgactttccagaggatcagcatctgtctgggaaaaaaaatcca
ggaagtaactgaacaataataacatttccatcacttcagtcaaagtgtga
tagtttaaatgtagttaatgaccaagatccttgtcaatattttagaagtt
agtataaagccacttgtgaagtggaaaaagagcactagggacaaaaagcc
tgaataatcttggaagtaaatatcctagccattattcacatacaatgtcc
acaatgataagagtcagttatgccaatactgggtgtatacttgaaggact
cccaagtaatatgctatagagatatttgcatgttcatatttatggcttca
ctattcacaaggacaggacatgcaaactgcctagatattcatcaatatat
gagttgaaaaagaaaacctggttcatatatactttggaaattttatttat
ttttaaggaaaacagaaagttaggtgtttgcaagaaaatagattcactca
aaatcatattaagctcataagacatacgtcagtgaaattgtgtgtatgtg
tgtgtttgtgtgtatatggtgtgcatgacaaagaagggggaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_68801742_68802946
seq2: B6Ng01-145O07.b_46_1233 (reverse)

seq1  GAAAGATGATCCAGAACACAGCATTCATATGCTTGCTTGTAGATCATACA  50
      ||||||||||||  ||| ||  | ||||| |||||| |||||||||||||
seq2  GAAAGATGATCC--AAC-CACGACTCATAGGCTTGC-TGTAGATCATACA  46

seq1  GGTCTCAAAACTGGTGTAGTTGAGAGTACTACT-CAGATGCCTGTGTATT  99
      ||||||||   | | |||| ||||||||||||| ||||||||   | |||
seq2  GGTCTCAA---TCGAGTAG-TGAGAGTACTACTCCAGATGCC--GGGATT  90

seq1  GTTGGCTTGACACTCTGAGAAGTAGTAGAACCTTTAAATGATGCAAGTGA  149
      | |||| ||||  |  |||||||||||||  | |||||||||||||||||
seq2  G-TGGC-TGAC-TTTGGAGAAGTAGTAGA--CCTTAAATGATGCAAGTGA  135

seq1  GTGGTAGGTTGGCAGACTAGTGGAGGAAAGCCCTTG-AAGGGTATTGTTG  198
      |||||||| ||||||||||||||||||||||||||| ||| ||| |||||
seq2  GTGGTAGG-TGGCAGACTAGTGGAGGAAAGCCCTTGAAAGAGTA-TGTTG  183

seq1  GAGCAGGCTCCCCTTCGCATCTTTTACTA-CACCACCAATTCTCAATATA  247
       |||||||||||||||||||| ||||||| ||||||||| |||| |||||
seq2  AAGCAGGCTCCCCTTCGCATC-TTTACTACCACCACCAA-TCTC-ATATA  230

seq1  GTGTGTTTTCCTTCTTCCTGCCCCATGAGAAGTCTAAAAGCAATAGAAGT  297
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GTGTGTTTTCCTTC-TCCTGCCCCATGAGAAGTCTAAAAGCAATAGAAGT  279

seq1  TCCTAGACTTCACACT-CCAAAATTATAGTTCAGAATAGTCTTTTCTGGA  346
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TCCTAGACTTCACACTCCCAAAATTATAGTTCAGAATAGTCTTTTCTGGA  329

seq1  TAACAGCATTGCATCTAGTATTTATTATAGTAATGAAAATATGACAGTAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGCATTGCATCTAGTATTTATTATAGTAATGAAAATATGACAGTAA  379

seq1  GTTACTGAAGGTTTTGAATTACATTCATATCAGAGTCCCTCCAAAGATAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTGAAGGTTTTGAATTACATTCATATCAGAGTCCCTCCAAAGATAT  429

seq1  TTGAGAGGGAATGTGCCCTTCTAGCTGAGACTACTTTGGAGGGTGAGATT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAGGGAATGTGCCCTTCTAGCTGAGACTACTTTGGAGGGTGAGATT  479

seq1  TTAAATCCAACTCTCAGCTCTGTTGTTCCCTATCCATGTGATCTTGGGAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATCCAACTCTCAGCTCTGTTGTTCCCTATCCATGTGATCTTGGGAT  529

seq1  AATCACCTAAACTCCCTAAGAGAGACTTACTTCCCCTACCACAAAACTAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACCTAAACTCCCTAAGAGAGACTTACTTCCCCTACCACAAAACTAG  579

seq1  TAACATGAAGGATTTCTCCATTTAGTTTATATTAGCAAAGCATCTTCTAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATGAAGGATTTCTCCATTTAGTTTATATTAGCAAAGCATCTTCTAA  629

seq1  ATGTCTGTCATCAAAGTCTCATAAGAATGAGCCCACCCATAGCTGCAGAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGTCATCAAAGTCTCATAAGAATGAGCCCACCCATAGCTGCAGAA  679

seq1  AGTGTCATCTTTGTCGGCAGAATAATGTTGAGTAAGTAACAACTTAGAAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCATCTTTGTCGGCAGAATAATGTTGAGTAAGTAACAACTTAGAAG  729

seq1  CTTGTCAAAGGACTGACAGCTCTGTTATCACGCCAAATATTCATTATCTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCAAAGGACTGACAGCTCTGTTATCACGCCAAATATTCATTATCTA  779

seq1  GGAGCAAATGTGTATCTTCTTCTCAAACTGCTGTTATGAAAAAAGCAACG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAAATGTGTATCTTCTTCTCAAACTGCTGTTATGAAAAAAGCAACG  829

seq1  TGTTTACAACATTCATCCTTTTAGATTATTCCTTTAGAAAGTACATAAAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACAACATTCATCCTTTTAGATTATTCCTTTAGAAAGTACATAAAA  879

seq1  TCAAAAGTGTTACTTCTGATCTCTGACTTCTTGAAGACTCTCTGACAGTC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGTGTTACTTCTGATCTCTGACTTCTTGAAGACTCTCTGACAGTC  929

seq1  AGTTTGGAGATAAATGAATATCTATCTTACCTTCATTGTATTATAGAAAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGGAGATAAATGAATATCTATCTTACCTTCATTGTATTATAGAAAA  979

seq1  GTCTCAACTACCAACCCCTGGTGATTTCTGTGAATCTAAATCTCTTAACT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAACTACCAACCCCTGGTGATTTCTGTGAATCTAAATCTCTTAACT  1029

seq1  CAATATAACTCTCCTTGCATTTATGTCAGAATGATAGTCAGAAATGATAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATAACTCTCCTTGCATTTATGTCAGAATGATAGTCAGAAATGATAA  1079

seq1  ATGCACTGCTTGTTCCTCACTACTTTTATGAATAACTAAATGATAAGCTC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACTGCTTGTTCCTCACTACTTTTATGAATAACTAAATGATAAGCTC  1129

seq1  TTCAATAATCCTGTGGGCTACAGAGTAGGAAATGACAAAACCTACAAATA  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATAATCCTGTGGGCTACAGAGTAGGAAATGACAAAACCTACAAATA  1179

seq1  TTTGAATTC  1205
      |||||||||
seq2  TTTGAATTC  1188

seq1: chr8_68635457_68636449
seq2: B6Ng01-145O07.g_71_1064

seq1  GAATTCCACTGTCTATTCTTGTTTGGTTTTCTCTGACTATGAAAGGCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTGTCTATTCTTGTTTGGTTTTCTCTGACTATGAAAGGCTTT  50

seq1  TGTTTGTTTGTTTACTTGTTTTTTTGTTTTTAATTTCTATGCTGTTATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTGTTTACTTGTTTTTTTGTTTTTAATTTCTATGCTGTTATTT  100

seq1  AAAGCTTCAGACAAAAGTCATGTCATCTTTTGGTCCTGGATATAGAGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTCAGACAAAAGTCATGTCATCTTTTGGTCCTGGATATAGAGATA  150

seq1  TGCATTTAAAGATGTTTCCTGCCTTTTCTTAGTGTTCTCAGAGTCAGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTAAAGATGTTTCCTGCCTTTTCTTAGTGTTCTCAGAGTCAGTGG  200

seq1  GAGCAGACTAGAAGAAAGATTGTGCCATTCTTACAGGATACAGGAGGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGACTAGAAGAAAGATTGTGCCATTCTTACAGGATACAGGAGGTGG  250

seq1  GATAAGCAAAGCAGCATGTTTAGACGCAGAAGGAAGAGTGAGAGGCTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGCAAAGCAGCATGTTTAGACGCAGAAGGAAGAGTGAGAGGCTAGG  300

seq1  AAGGAAGGTACAGAGCTATAGATGGATTAGCCCAGTATTCATGGCAAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGTACAGAGCTATAGATGGATTAGCCCAGTATTCATGGCAAGAC  350

seq1  TGGAGATCAGGGAAGAGAAGTCACAGGAACATGAATTTGGAAGAGAAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATCAGGGAAGAGAAGTCACAGGAACATGAATTTGGAAGAGAAGAC  400

seq1  TAGAAAGTGACTTTCCAGAGGATCAGCATCTGTCTGGGAAAAAAAATCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGTGACTTTCCAGAGGATCAGCATCTGTCTGGGAAAAAAAATCCA  450

seq1  GGAAGTAACTGAACAATAATAACATTTCCATCACTTCAGTCAAAGTGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTAACTGAACAATAATAACATTTCCATCACTTCAGTCAAAGTGTGA  500

seq1  TAGTTTAAATGTAGTTAATGACCAAGATCCTTGTCAATATTTTAGAAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTAAATGTAGTTAATGACCAAGATCCTTGTCAATATTTTAGAAGTT  550

seq1  AGTATAAAGCCACTTGTGAAGTGGAAAAAGAGCACTAGGGACAAAAAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAAAGCCACTTGTGAAGTGGAAAAAGAGCACTAGGGACAAAAAGCC  600

seq1  TGAATAATCTTGGAAGTAAATATCCTAGCCATTATTCACATACAATGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAATCTTGGAAGTAAATATCCTAGCCATTATTCACATACAATGTCC  650

seq1  ACAATGATAAGAGTCAGTTATGCCAATACTGGGTGTATACTTGAAGGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGATAAGAGTCAGTTATGCCAATACTGGGTGTATACTTGAAGGACT  700

seq1  CCCAAGTAATATGCTATAGAGATATTTGCATGTTCATATTTATGGCTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGTAATATGCTATAGAGATATTTGCATGTTCATATTTATGGCTTCA  750

seq1  CTATTCACAAGGACAGGACATGCAAACTGCCTAGATATTCATCAATATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCACAAGGACAGGACATGCAAACTGCCTAGATATTCATCAATATAT  800

seq1  GAGTTGAAAAAGAAAACCTGGTTCATATATACTTTGGAAATTTTATTTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGAAAAAGAAAACCTGGTTCATATATACTTTGGAAATTTTATTTAT  850

seq1  TTTTAAGGAAAACAGAAAGTTAGGTGTTTGCAAGAAAATAGATTCAACTC  900
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTTTAAGGAAAACAGAAAGTTAGGTGTTTGCAAGAAAATAGATTC-ACTC  899

seq1  AAAATCATATTAAGCTCATAAGACATACGTCAGTGAAATTGTGTGTATGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCATATTAAGCTCATAAGACATACGTCAGTGAAATTGTGTGTATGT  949

seq1  GTGTGTTTGTGTGTATAT-GTGTGCATGACAAAGAA-GGGGAAGG  993
      |||||||||||||||||| ||||||||||||||||| ||||||||
seq2  GTGTGTTTGTGTGTATATGGTGTGCATGACAAAGAAGGGGGAAGG  994