BAC Information

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BAC

Clone NameB6Ng01-146G13
Chromosome8 (Build37)
Map Location 67,374,672 - 67,525,676
singlet/doubletdoublet
Overlap geneLOC619647, 3110005G23Rik, Trim75, Trim60
Upstream geneEG244495, Tll1, LOC100040989, Cpe, Sc4mol, Klhl2, LOC100040903
Downstream geneLOC665388, LOC665396, LOC100040949, LOC665405, Vaultrc-ps1, LOC100040967, March1, LOC100040986
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146G13.bB6Ng01-146G13.g
ACCDH943562DH943563
length1,163706
definitionDH943562|Mus musculus domesticus DNA, BAC clone: B6Ng01-146G13, 5' end.DH943563|Mus musculus domesticus DNA, BAC clone: B6Ng01-146G13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,524,496 - 67,525,676)(67,374,672 - 67,375,377)
sequence
gaattctgctcaccgtctgagctaagttaaagcattttgattggacgtca
gtgaataccatccgagtactagaccagtgacacctacgaggacttggaag
gacacaacggctcacagttccttgagctcctggaaggcaggccctgccaa
ggaatttctccatttagtttcctctcagaccaatggactccacagcccta
aaaatcttgcaggacaaatgtatctgttacatttgttcggatttcatgga
agacccagtgaccagtaggtgtgggcacaacttctgttttgcctgcctcc
gtttgctctgggatgatctacaaggcaacatcttctgtcccgtctgtcaa
accccctttccaccgaaaagcttcagcaggaactaccagttccgtaacat
gactgaaaccattaggctcctgcaaaagagacagagcaagaggaagaggc
aggaagaacacacagtatgtccgaagcatgatcagcctctggtcttgttc
tgtgtgagggatcgggatgtcttatgtacccagtgtagcctctctgtcga
acaccagggccattacacctgccccattaagaaagccagctcttatcaca
ggaaagtcctagagagcgccattgcaacgttaaagttcggagtgaaacaa
gttgaagaaaagctagctgtgcagcacagaagggttcttggactgaggga
ggaggctcaatatcaaaaaatagagatacgttatgaaattgggcaaatca
aactgttcctacaaagtgagtacgaagcgcatctaaatgagagccacatg
gaggagctgcggagtttctcagaactgaatggatatcttgagaccctgtt
agaccatgtttccacagcaaaagatctgttgaaggaagtgagccatacat
gaaaggtcagatttcacactcctgagagcctacacaagtgcaaaacttta
atcctccaaacgtggttatttaggacaaagcatatggcctcagtcttcca
gcgcagtattctggctttgagcaaatcatcaagcaattcagcaattgtga
cttttgatctggcccagccaaccttagctggttatttctaagaatagaaa
ttcgtgttttataaaagacatggctatgttgtgtgctaccctacgaattt
cacctggcccgct
gaattcttcagttccactccaaacttactgtctaggcaccctcggggtag
agccaggattccaggcttgaaggaaggcaaggtctgagactctctactta
ctgtaactgaggcagtactagaccattactggccaaatggttaccgttag
ttgtataagtgatacactcgcggagggaagggagcaggcaagtttagtct
agccaaaatacaaaagaaagatggctgaactggagtcagagggattgaaa
gaagtggtcagattctagatgataaagtgctcagtaagaattccgatgga
ttaggcttcaggagaagtagcgtccggagtgaacttaaatttggaagttg
acccatgtagatcgtatgtacagtcacaagactagttgaaataagctctg
taatgtagctacagaaaagaccaagacatgatccctgggccactccagca
tcacacgaacggagtgcttgcctgagggagcacaaggctccatccctagc
actgccaataagtacttaaataaaataattgcaaaagtgttggtgtgtgc
ttataatccccgcactcaggaggccaagaaagggtgctcagtggtgactt
gttttaataaagaaaatatgccttgccgtgattaatatctctgcatcgtt
aggccattactgatttgccatgcggagggcctgcatgatgacttccttat
ggctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_67524496_67525676
seq2: B6Ng01-146G13.b_48_1210 (reverse)

seq1  AGCGGGCCAGAGGTGAAATTTCTGAGGGCTAGCACACACACATGGCCATG  50
      ||||||||  |||||||| |||  |||| ||||||||| |||| ||||||
seq2  AGCGGGCC--AGGTGAAA-TTCGTAGGG-TAGCACACA-ACATAGCCATG  45

seq1  CTTCTTTATAAAACACAGATTTTCTATCCTCAGAAATAACCAGCTGAGGG  100
       |  |||||||||||| || ||||||| || |||||||||||||| ||| 
seq2  -TCTTTTATAAAACAC-GAATTTCTATTCTTAGAAATAACCAGCTAAGGT  93

seq1  TGTGCTGTGTCACGATCAAAAGTCACATCTGCTTGAAATTGCTTGATGAT  150
      || |||| | || ||||||||||||||  ||||   ||||||||||||||
seq2  TG-GCTGGGCCA-GATCAAAAGTCACAATTGCT--GAATTGCTTGATGAT  139

seq1  TCTGCTC-AAGCCAGAATACTGCGCTGGGAGACTGAGGCCATATTGCTTT  199
      | ||||| |||||||||||||||||||| |||||||||||||| ||||||
seq2  T-TGCTCAAAGCCAGAATACTGCGCTGGAAGACTGAGGCCATA-TGCTTT  187

seq1  GTCCTAAATAACCACGGTTTGGGGGATTTAAGGTTTTGCAACTTGTGGTA  249
      ||||||||||||||| |||||| ||| |||| ||||||| |||||| |||
seq2  GTCCTAAATAACCAC-GTTTGGAGGA-TTAAAGTTTTGC-ACTTGT-GTA  233

seq1  GGCTCTCAGGAGTGTGACATCTGACCTTTCATGTATGGCCTCCACTTCCT  299
      ||||||||||||||||| |||||||||||||||||||||   ||||||||
seq2  GGCTCTCAGGAGTGTGAAATCTGACCTTTCATGTATGGC--TCACTTCCT  281

seq1  TCAACAGATCTTTTGCTGTGGAAACATGGTCTAACAGGGTCTCAAGATAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAGATCTTTTGCTGTGGAAACATGGTCTAACAGGGTCTCAAGATAT  331

seq1  CCATTCAGTTCTGAGAAACTCCGCAGCTCCTCCATGTGGCTCTCATTTAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCAGTTCTGAGAAACTCCGCAGCTCCTCCATGTGGCTCTCATTTAG  381

seq1  ATGCGCTTCGTACTCACTTTGTAGGAACAGTTTGATTTGCCCAATTTCAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGCTTCGTACTCACTTTGTAGGAACAGTTTGATTTGCCCAATTTCAT  431

seq1  AACGTATCTCTATTTTTTGATATTGAGCCTCCTCCCTCAGTCCAAGAACC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTATCTCTATTTTTTGATATTGAGCCTCCTCCCTCAGTCCAAGAACC  481

seq1  CTTCTGTGCTGCACAGCTAGCTTTTCTTCAACTTGTTTCACTCCGAACTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTGCTGCACAGCTAGCTTTTCTTCAACTTGTTTCACTCCGAACTT  531

seq1  TAACGTTGCAATGGCGCTCTCTAGGACTTTCCTGTGATAAGAGCTGGCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGTTGCAATGGCGCTCTCTAGGACTTTCCTGTGATAAGAGCTGGCTT  581

seq1  TCTTAATGGGGCAGGTGTAATGGCCCTGGTGTTCGACAGAGAGGCTACAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATGGGGCAGGTGTAATGGCCCTGGTGTTCGACAGAGAGGCTACAC  631

seq1  TGGGTACATAAGACATCCCGATCCCTCACACAGAACAAGACCAGAGGCTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTACATAAGACATCCCGATCCCTCACACAGAACAAGACCAGAGGCTG  681

seq1  ATCATGCTTCGGACATACTGTGTGTTCTTCCTGCCTCTTCCTCTTGCTCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGCTTCGGACATACTGTGTGTTCTTCCTGCCTCTTCCTCTTGCTCT  731

seq1  GTCTCTTTTGCAGGAGCCTAATGGTTTCAGTCATGTTACGGAACTGGTAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTTTTGCAGGAGCCTAATGGTTTCAGTCATGTTACGGAACTGGTAG  781

seq1  TTCCTGCTGAAGCTTTTCGGTGGAAAGGGGGTTTGACAGACGGGACAGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCTGAAGCTTTTCGGTGGAAAGGGGGTTTGACAGACGGGACAGAA  831

seq1  GATGTTGCCTTGTAGATCATCCCAGAGCAAACGGAGGCAGGCAAAACAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTGCCTTGTAGATCATCCCAGAGCAAACGGAGGCAGGCAAAACAGA  881

seq1  AGTTGTGCCCACACCTACTGGTCACTGGGTCTTCCATGAAATCCGAACAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTGCCCACACCTACTGGTCACTGGGTCTTCCATGAAATCCGAACAA  931

seq1  ATGTAACAGATACATTTGTCCTGCAAGATTTTTAGGGCTGTGGAGTCCAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAACAGATACATTTGTCCTGCAAGATTTTTAGGGCTGTGGAGTCCAT  981

seq1  TGGTCTGAGAGGAAACTAAATGGAGAAATTCCTTGGCAGGGCCTGCCTTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTGAGAGGAAACTAAATGGAGAAATTCCTTGGCAGGGCCTGCCTTC  1031

seq1  CAGGAGCTCAAGGAACTGTGAGCCGTTGTGTCCTTCCAAGTCCTCGTAGG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCTCAAGGAACTGTGAGCCGTTGTGTCCTTCCAAGTCCTCGTAGG  1081

seq1  TGTCACTGGTCTAGTACTCGGATGGTATTCACTGACGTCCAATCAAAATG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTGGTCTAGTACTCGGATGGTATTCACTGACGTCCAATCAAAATG  1131

seq1  CTTTAACTTAGCTCAGACGGTGAGCAGAATTC  1181
      ||||||||||||||||||||||||||||||||
seq2  CTTTAACTTAGCTCAGACGGTGAGCAGAATTC  1163

seq1: chr8_67374672_67375377
seq2: B6Ng01-146G13.g_68_773

seq1  GAATTCTTCAGTTCCACTCCAAACTTACTGTCTAGGCACCCTCGGGGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGTTCCACTCCAAACTTACTGTCTAGGCACCCTCGGGGTAG  50

seq1  AGCCAGGATTCCAGGCTTGAAGGAAGGCAAGGTCTGAGACTCTCTACTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGATTCCAGGCTTGAAGGAAGGCAAGGTCTGAGACTCTCTACTTA  100

seq1  CTGTAACTGAGGCAGTACTAGACCATTACTGGCCAAATGGTTACCGTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAACTGAGGCAGTACTAGACCATTACTGGCCAAATGGTTACCGTTAG  150

seq1  TTGTATAAGTGATACACTCGCGGAGGGAAGGGAGCAGGCAAGTTTAGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATAAGTGATACACTCGCGGAGGGAAGGGAGCAGGCAAGTTTAGTCT  200

seq1  AGCCAAAATACAAAAGAAAGATGGCTGAACTGGAGTCAGAGGGATTGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAAATACAAAAGAAAGATGGCTGAACTGGAGTCAGAGGGATTGAAA  250

seq1  GAAGTGGTCAGATTCTAGATGATAAAGTGCTCAGTAAGAATTCCGATGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGTCAGATTCTAGATGATAAAGTGCTCAGTAAGAATTCCGATGGA  300

seq1  TTAGGCTTCAGGAGAAGTAGCGTCCGGAGTGAACTTAAATTTGGAAGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCTTCAGGAGAAGTAGCGTCCGGAGTGAACTTAAATTTGGAAGTTG  350

seq1  ACCCATGTAGATCGTATGTACAGTCACAAGACTAGTTGAAATAAGCTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATGTAGATCGTATGTACAGTCACAAGACTAGTTGAAATAAGCTCTG  400

seq1  TAATGTAGCTACAGAAAAGACCAAGACATGATCCCTGGGCCACTCCAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTAGCTACAGAAAAGACCAAGACATGATCCCTGGGCCACTCCAGCA  450

seq1  TCACACGAACGGAGTGCTTGCCTGAGGGAGCACAAGGCTCCATCCCTAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACGAACGGAGTGCTTGCCTGAGGGAGCACAAGGCTCCATCCCTAGC  500

seq1  ACTGCCAATAAGTACTTAAATAAAATAATTGCAAAAGTGTTGGTGTGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCAATAAGTACTTAAATAAAATAATTGCAAAAGTGTTGGTGTGTGC  550

seq1  TTATAATCCCCGCACTCAGGAGGCCAAGAAAGGGTGCTCAGTGGTGACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATCCCCGCACTCAGGAGGCCAAGAAAGGGTGCTCAGTGGTGACTT  600

seq1  GTTTTAATAAAGAAAATATGCCTTGCCGTGATTAATATCTCTGCATCGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAATAAAGAAAATATGCCTTGCCGTGATTAATATCTCTGCATCGTT  650

seq1  AGGCCATTACTGATTTGCCATGCGGAGGGCCTGCATGATGACTTCCTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCATTACTGATTTGCCATGCGGAGGGCCTGCATGATGACTTCCTTAT  700

seq1  GGCTCA  706
      ||||||
seq2  GGCTCA  706