BAC Information

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BAC

Clone NameB6Ng01-146N18
Chromosome8 (Build37)
Map Location 115,824,742 - 115,971,021
singlet/doubletdoublet
Overlap genenone
Upstream geneCntnap4, LOC100042061
Downstream geneMon1b, 4930481F22Rik, Adamts18, Nudt7, AI427515, Clec3a, Wwox
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146N18.bB6Ng01-146N18.g
ACCDH943893DH943894
length1,1481,110
definitionDH943893|Mus musculus domesticus DNA, BAC clone: B6Ng01-146N18, 5' end.DH943894|Mus musculus domesticus DNA, BAC clone: B6Ng01-146N18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,969,876 - 115,971,021)(115,824,742 - 115,825,854)
sequence
gaattccagcattttccatccatttatttacctaatcacccatccatcta
tccatgtacccacccttgtaccaacctaattattctttgccgattgatta
attgatcagttcattcatccatccattcattcactcactcacttctgtaa
accaacacaaaccgaggtgaaaagcaagtaaaaataaatttgacttagcc
tcctttccagtcaagaaaggtttcatttccatggttaatattgggtaatt
gagaatgaatagccaagaagtatgccacctacggtcaattttaagctctg
ggaatatttttcagaaaatggtccttgggtaacatcattgcctgctgaca
taaggagacagtttaaagcataagcaggataggatgagaacaaagagaat
gttctgagaaactccagccaccataaacagaaacccaagaacggcatggc
gcaacctgaagttgtgtaggtaggcaggggtagaagctttttcaaaaatg
gagtaaaagacaagtcattgttgaaaaccttgtaaattcccttgacactg
agatatttctaagaacacaagagatagtagaccttctcagtgcttagtgg
tgctttccaggccatagtattgttcaccccccacgaacctatgtgtttct
tcctgcattaaaattaagttattaagctcggtggtcaatggcagaagacc
catctagaaaacacaagtcttgattcccaagtctgcatgaaaaaaacatt
actattactgctactactattatgttactgtatttttattttgtcacagg
gcattaccacatagccctggttggtctggaactcagcatgtagaccaggg
tggccttgagctcacagtggtatattttgcctctgcctcctgaatgttga
gatgaaaggtgtgtgccaccaaaccaaataagtgattgccttctattccc
gatatgacctgacatctctgtttcaaagcacagtttctcctaggtgtgat
agataggataaaatgtaatagtatacatgcacaccacccatatatttttc
taggaactccagatattctcttttgtactcgactaaggcaaggttgaaat
tgagcctctgaaaacttgtatcttggaaaattgctccttgacttttat
gaattcactgagctgtgtgcttaatgtttgtgcacttttctgtatgcaca
ttatgcttcatagcatttcccccccccaaagaagggaacaaatcaattta
attaatcacattaacaaaataatgaagaaaataataaaatcatcacacca
ctgatgcagaaaaagcaatttataaaattgagtcttaatgaaaattctct
tagcaaagctgcaataaaatagaactttgttagttttattagaaatcttt
aaggaaactcacatttccttcagaaatagtgaaggcttttcttcccctga
gatcagaaagcaaagctatctgctatcacctaaggtctcaactctgacat
ttctgaacacattaactagtatcataaggcaagcttaggaactcattgtc
ttaaaagacttggaagactatcctaaaataattcatatataaattataaa
atatgagtaacattttatttttagatatgcacatttgaatattaaaaata
ttacagaggctagagagatggctccctggttaaagtgcttgtcacataaa
tgtgaagacaagagttcagatctctagcagccaagtaaataatgaccatt
agaaaacacaaatacttacactgtagttcataacagaagcaagattacag
ttttgaagtagtaacaagaataattttatggttggggtcaccacaacatg
agcattaggaatgcagcattaggaggttgaaaatcactgcttaaattttt
ctttttcaaaaaaaaattacctgtttttaaatatactcactatacatgca
cacacacacaaagaatgagagtgaagaagagaggggaggtagagaaattg
aagatattgaaaataactccattatctgggtagttctatactggctatca
gtcaacttcatgttaacttctcaattgtctatgcaaattcaaattcttga
cattgtatgagaggtttgtgttctctgtatcctcaccagtattgactttt
ttttgtgatttatatatatagagagagaagatatactccatatatatgta
tgtgaatataatttgtatcctaatgaatatattcctatattatagttaaa
tatttatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_115969876_115971021
seq2: B6Ng01-146N18.b_51_1198 (reverse)

seq1  ATAAAAGTCAA-GAGCATATTCTCAAGATACAAAGTTTTTCAGAGGCTTC  49
      ||||||||||| |||||  ||  ||||||||||   ||||||||||||  
seq2  ATAAAAGTCAAGGAGCAATTTTCCAAGATACAA--GTTTTCAGAGGCTCA  48

seq1  ATTTCAA-CTTGCCTTTGGTCGAGTACAAAAGAAGATATCTGGAGTTCTT  98
      ||||||| |||||| || |||||||||||||||  ||||||||||||| |
seq2  ATTTCAACCTTGCC-TTAGTCGAGTACAAAAGAGAATATCTGGAGTTCCT  97

seq1  AG--AAATATATGGGT-GTGTGCATGTATACTA-TACA-TGTATCCTATC  143
      ||  |||||||||||| |||||||||||||||| |||| | |||||||||
seq2  AGAAAAATATATGGGTGGTGTGCATGTATACTATTACATTTTATCCTATC  147

seq1  TATTCACACCTAAGGAGAAAACTGTGCTTTGAAACAGAGATGTCAGGTCA  193
      || |||||||| ||||| ||||||||||||||||||||||||||||||||
seq2  TA-TCACACCT-AGGAG-AAACTGTGCTTTGAAACAGAGATGTCAGGTCA  194

seq1  TATCGGGAATAGAAGGCAATCACTTATTTGGTTTGGTGGCACACACCTTT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCGGGAATAGAAGGCAATCACTTATTTGGTTTGGTGGCACACACCTTT  244

seq1  CATCTCAACATTCAGGAGGCAGAGGC-AAATATACCACTGTGAGCTCAAG  292
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CATCTCAACATTCAGGAGGCAGAGGCAAAATATACCACTGTGAGCTCAAG  294

seq1  GCCACCCTGGTCTACATGCTGAGTTCCAGACCAACCAGGGCTATGTGGTA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCCTGGTCTACATGCTGAGTTCCAGACCAACCAGGGCTATGTGGTA  344

seq1  ATGCCCTGTGACAAAATAAAAATACAGTAACATAATAGTAGTAGCAGTAA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCTGTGACAAAATAAAAATACAGTAACATAATAGTAGTAGCAGTAA  394

seq1  TAGTAATGTTTTTTTCATGCAGACTTGGGAATCAAGACTTGTGTTTTCTA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAATGTTTTTTTCATGCAGACTTGGGAATCAAGACTTGTGTTTTCTA  444

seq1  GATGGGTCTTCTGCCATTGACCACCGAGCTTAATAACTTAATTTTAATGC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGTCTTCTGCCATTGACCACCGAGCTTAATAACTTAATTTTAATGC  494

seq1  AGGAAGAAACACATAGGTTCGTGGGGGGTGAACAATACTATGGCCTGGAA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAAACACATAGGTTCGTGGGGGGTGAACAATACTATGGCCTGGAA  544

seq1  AGCACCACTAAGCACTGAGAAGGTCTACTATCTCTTGTGTTCTTAGAAAT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCACTAAGCACTGAGAAGGTCTACTATCTCTTGTGTTCTTAGAAAT  594

seq1  ATCTCAGTGTCAAGGGAATTTACAAGGTTTTCAACAATGACTTGTCTTTT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGTGTCAAGGGAATTTACAAGGTTTTCAACAATGACTTGTCTTTT  644

seq1  ACTCCATTTTTGAAAAAGCTTCTACCCCTGCCTACCTACACAACTTCAGG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCATTTTTGAAAAAGCTTCTACCCCTGCCTACCTACACAACTTCAGG  694

seq1  TTGCGCCATGCCGTTCTTGGGTTTCTGTTTATGGTGGCTGGAGTTTCTCA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCGCCATGCCGTTCTTGGGTTTCTGTTTATGGTGGCTGGAGTTTCTCA  744

seq1  GAACATTCTCTTTGTTCTCATCCTATCCTGCTTATGCTTTAAACTGTCTC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTCTCTTTGTTCTCATCCTATCCTGCTTATGCTTTAAACTGTCTC  794

seq1  CTTATGTCAGCAGGCAATGATGTTACCCAAGGACCATTTTCTGAAAAATA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGTCAGCAGGCAATGATGTTACCCAAGGACCATTTTCTGAAAAATA  844

seq1  TTCCCAGAGCTTAAAATTGACCGTAGGTGGCATACTTCTTGGCTATTCAT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGAGCTTAAAATTGACCGTAGGTGGCATACTTCTTGGCTATTCAT  894

seq1  TCTCAATTACCCAATATTAACCATGGAAATGAAACCTTTCTTGACTGGAA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAATTACCCAATATTAACCATGGAAATGAAACCTTTCTTGACTGGAA  944

seq1  AGGAGGCTAAGTCAAATTTATTTTTACTTGCTTTTCACCTCGGTTTGTGT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGCTAAGTCAAATTTATTTTTACTTGCTTTTCACCTCGGTTTGTGT  994

seq1  TGGTTTACAGAAGTGAGTGAGTGAATGAATGGATGGATGAATGAACTGAT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTACAGAAGTGAGTGAGTGAATGAATGGATGGATGAATGAACTGAT  1044

seq1  CAATTAATCAATCGGCAAAGAATAATTAGGTTGGTACAAGGGTGGGTACA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAATCAATCGGCAAAGAATAATTAGGTTGGTACAAGGGTGGGTACA  1094

seq1  TGGATAGATGGATGGGTGATTAGGTAAATAAATGGATGGAAAATGCTGGA  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAGATGGATGGGTGATTAGGTAAATAAATGGATGGAAAATGCTGGA  1144

seq1  ATTC  1146
      ||||
seq2  ATTC  1148

seq1: chr8_115824742_115825854
seq2: B6Ng01-146N18.g_66_1175

seq1  GAATTCACTGAGCTGTGTGCTTAATGTTTGTGCACTTTTCTGTATGCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGAGCTGTGTGCTTAATGTTTGTGCACTTTTCTGTATGCACA  50

seq1  TTATGCTTCATAGCATTTCCCCCCCCCAAAGAAGGGAACAAATCAATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCTTCATAGCATTTCCCCCCCCCAAAGAAGGGAACAAATCAATTTA  100

seq1  ATTAATCACATTAACAAAATAATGAAGAAAATAATAAAATCATCACACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATCACATTAACAAAATAATGAAGAAAATAATAAAATCATCACACCA  150

seq1  CTGATGCAGAAAAAGCAATTTATAAAATTGAGTCTTAATGAAAATTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGCAGAAAAAGCAATTTATAAAATTGAGTCTTAATGAAAATTCTCT  200

seq1  TAGCAAAGCTGCAATAAAATAGAACTTTGTTAGTTTTATTAGAAATCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAAGCTGCAATAAAATAGAACTTTGTTAGTTTTATTAGAAATCTTT  250

seq1  AAGGAAACTCACATTTCCTTCAGAAATAGTGAAGGCTTTTCTTCCCCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAACTCACATTTCCTTCAGAAATAGTGAAGGCTTTTCTTCCCCTGA  300

seq1  GATCAGAAAGCAAAGCTATCTGCTATCACCTAAGGTCTCAACTCTGACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGAAAGCAAAGCTATCTGCTATCACCTAAGGTCTCAACTCTGACAT  350

seq1  TTCTGAACACATTAACTAGTATCATAAGGCAAGCTTAGGAACTCATTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAACACATTAACTAGTATCATAAGGCAAGCTTAGGAACTCATTGTC  400

seq1  TTAAAAGACTTGGAAGACTATCCTAAAATAATTCATATATAAATTATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGACTTGGAAGACTATCCTAAAATAATTCATATATAAATTATAAA  450

seq1  ATATGAGTAACATTTTATTTTTAGATATGCACATTTGAATATTAAAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGTAACATTTTATTTTTAGATATGCACATTTGAATATTAAAAATA  500

seq1  TTACAGAGGCTAGAGAGATGGCTCCCTGGTTAAAGTGCTTGTCACATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGAGGCTAGAGAGATGGCTCCCTGGTTAAAGTGCTTGTCACATAAA  550

seq1  TGTGAAGACAAGAGTTCAGATCTCTAGCAGCCAAGTAAATAATGACCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAGACAAGAGTTCAGATCTCTAGCAGCCAAGTAAATAATGACCATT  600

seq1  AGAAAACACAAATACTTACACTGTAGTTCATAACAGAAGCAAGATTACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACACAAATACTTACACTGTAGTTCATAACAGAAGCAAGATTACAG  650

seq1  TTTTGAAGTAGTAACAAGAATAATTTTATGGTTGGGGTCACCACAACATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAGTAGTAACAAGAATAATTTTATGGTTGGGGTCACCACAACATG  700

seq1  AGCATTAGGAATGCAGCATTAGGAGGTTGAAAATCACTGCTTAAATTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTAGGAATGCAGCATTAGGAGGTTGAAAATCACTGCTTAAATTTTT  750

seq1  CTTTTTCAAAAAAAAATTACCTGTTTTTAAATATACTCACTATACATGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCAAAAAAAAATTACCTGTTTTTAAATATACTCACTATACATGCA  800

seq1  CACACACACAAAGAATGAGAGTGAAGAAGAGA-GGGAGGTAGAGAAATTG  849
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CACACACACAAAGAATGAGAGTGAAGAAGAGAGGGGAGGTAGAGAAATTG  850

seq1  AAGATATTGAAAATAACTCCATTATCT-GGTAGTTCTATTACTGGCTATC  898
      ||||||||||||||||||||||||||| |||||||||| |||||||||||
seq2  AAGATATTGAAAATAACTCCATTATCTGGGTAGTTCTA-TACTGGCTATC  899

seq1  AGTCAACTTCATGTTAACTTCTCAAATGTCTATGCAAATTCAAATTCTTG  948
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGTCAACTTCATGTTAACTTCTCAATTGTCTATGCAAATTCAAATTCTTG  949

seq1  ACAATGTATGAGAGGTTTGTGTTCTCTGTATCCTCACCAGTATTGAC-TA  997
      ||| ||||||||||||||||||||||||||||||||||||||||||| | 
seq2  ACATTGTATGAGAGGTTTGTGTTCTCTGTATCCTCACCAGTATTGACTTT  999

seq1  TTTTTGTGAATATATATATATAGAGAGAGATAGATATACT-CATATATAT  1046
      |||||||| || |||||||||||||||||| ||||||||| |||||||||
seq2  TTTTTGTG-ATTTATATATATAGAGAGAGA-AGATATACTCCATATATAT  1047

seq1  GTATGTGAATATATATTTGTAATACATATGAATATATT-CTATATATATA  1095
      ||||||||||||| |||||| || |  ||||||||||| |||||| ||||
seq2  GTATGTGAATATA-ATTTGT-ATCCTAATGAATATATTCCTATAT-TATA  1094

seq1  TGTATAAATATATATATA  1113
       || ||||||| ||||||
seq2  -GT-TAAATATTTATATA  1110