BAC Information

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BAC

Clone NameB6Ng01-146O01
Chromosome8 (Build37)
Map Location 113,863,388 - 113,998,037
singlet/doubletdoublet
Overlap geneFa2h, Wdr59
Upstream geneHydin, LOC672398, Vac14, BC060632, 2010004A03Rik, Sf3b3, Cog4, Fuk, St3gal2, Ddx19a, Ddx19b, Aars, Exosc6, Mrcl, 4930402E16Rik, 9430091E24Rik, Glg1, Rfwd3, LOC547023, Mlkl
Downstream geneZnrf1, Ldhd, Zfp1, Ctrb1, Bcar1, Cfdp1, Tmem170, Chst5, 4932417I16Rik, Gabarapl2, Adat1, Kars, Terf2ip, EG627828, LOC672498, LOC100042040
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146O01.bB6Ng01-146O01.g
ACCDH943907DH943908
length1,1351,147
definitionDH943907|Mus musculus domesticus DNA, BAC clone: B6Ng01-146O01, 5' end.DH943908|Mus musculus domesticus DNA, BAC clone: B6Ng01-146O01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,863,388 - 113,864,527)(113,996,893 - 113,998,037)
sequence
gaattcactgtgtagccaagagtgttcttagactgttggtcctccagcct
cccctccttcatcctgggataacagaagtgcaccaccacacttcttttct
gtggtgctgtggattgaacccaggattctgtgtttgctaggcaagttccc
tatcaccgagccagccccctctttgttttgtgacaatgtctctctaagtt
acctgaggaggtcttgaacttttgtgatccctgctttcttagcctcccat
gtggctggaataacagactcgggccatcaggcccactttgtaattgttct
cccttgtcagttgtcttaggtctagagatttatgtatgtgcctgccttag
ttagggttttactgctgtgaacaggcaccatgaccaaggcaactgttata
aagacatttaagtggggctggcttacaggttcagaggttcagtccattat
tatcaaggctggaacatggcatcatgcaggcaggcatggtgcaggaggaa
atgagagttctacatcttcatctgaaggctgttagcagagtactgacttc
ctagcagctaggactagggtattatagcccactcccactgtgacacacct
actccaacaaggctaccactcctaatagtgccactccctggcctaagcat
ttacaaaccatcacagagatgatatattgtgagtcaactctcctggcaaa
ggcagaggagggaaaatctgggaaatgtgtgactccagggccagcgagat
ggctcagcaggtaaaagtgcatgcctctaagtgagagttcacctgggact
cacacagtgaacgaaaggagagagaaaaaatgtcctgcaaggtgccctct
gaccatactctcaccatggacatatgcttacacacatgcacaaattaacg
acaaagaaagatgtagtcttcatagaaacttactagattcatggggtagt
cagccagattccatgggggagaggtcagcacttgaagttctaggtcagaa
ggcagcctccactcttgctcaaggccatggtcagaagaagtgggtaattg
tgtgaactctcacagtcacaataaagtaactaactgggttcatgtgacct
gctaagcctggaagcatccgggggaagcttttgta
gaattcacaggcacccaagtcaagaatggcatagaataattgtggaggta
aattgtgggcacttgcttatatttaaccactttcgatctaaaggtttcat
gtggttcaatgtatttacgatgtccaaaacagatgtcagttgttttgtgg
ttaatttgcaaccaccgcacctctccctgaggcttcctcatgcagtaatg
cagtagtctctttaagctgagcaggctgacggagtggagcagtgggagcc
ccatgctctcctgtgtgtggcctcgccctcgctgtggaggccgatgagtc
cgtcctgaggactgttttctcctcaggaggcctgcatccgtattaccgac
cacttttgctctggaagtatttccagctaactgaaattttctgtgtccac
atttttcttgtgtgcacttgacctctgcccctgagagtattcggagaggg
aggcagaaggaccgagatgggcctgcattaaggcctagcaaggagcaagt
gcactgggctccccaggtctcgtgcagcctcctgcagaccatggtttatt
tctcttgtgtttttaatctgcctgacttaggttgaatttgcattcaccca
gtgttctctagatgaaattatgtttgctactaagaacttaagtgtaagtg
acctaaagacctgtcaaatctcatatagatcagaaagcacagcacagatt
aggccaaaagaaatattgtttattctggatcttctaataaatattgagca
ttgacctattaggcattttccaaattttgcagcctctcatctctgcttca
gttcccattactaaaatagctctgatgtaaataactgaagaggcctttaa
gttaatggagtaggatctgattctccacaaacagtatggtatactgctta
tctgatgctggagtactagggagtgcccttctcagcttagcttctgggtc
ccctggcattgtcaaggataggttttgcagtcctggactagacattcagt
caacagctgctccctagccgcacatgggaacaaatgcttaggaaggaaca
gaagtgtgctcctgcttggtcttccacccggggagggaacgagtaactct
tgcttggtttctccacttggcagagaccttaggctgtgctagagtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_113863388_113864527
seq2: B6Ng01-146O01.b_42_1176

seq1  GAATTCACTGTGTAGCCAAGAGTGTTCTTAGACTGTTGGTCCTCCAGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTGTAGCCAAGAGTGTTCTTAGACTGTTGGTCCTCCAGCCT  50

seq1  CCCCTCCTTCATCCTGGGATAACAGAAGTGCACCACCACACTTCTTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCTTCATCCTGGGATAACAGAAGTGCACCACCACACTTCTTTTCT  100

seq1  GTGGTGCTGTGGATTGAACCCAGGATTCTGTGTTTGCTAGGCAAGTTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGCTGTGGATTGAACCCAGGATTCTGTGTTTGCTAGGCAAGTTCCC  150

seq1  TATCACCGAGCCAGCCCCCTCTTTGTTTTGTGACAATGTCTCTCTAAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACCGAGCCAGCCCCCTCTTTGTTTTGTGACAATGTCTCTCTAAGTT  200

seq1  ACCTGAGGAGGTCTTGAACTTTTGTGATCCCTGCTTTCTTAGCCTCCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAGGAGGTCTTGAACTTTTGTGATCCCTGCTTTCTTAGCCTCCCAT  250

seq1  GTGGCTGGAATAACAGACTCGGGCCATCAGGCCCACTTTGTAATTGTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTGGAATAACAGACTCGGGCCATCAGGCCCACTTTGTAATTGTTCT  300

seq1  CCCTTGTCAGTTGTCTTAGGTCTAGAGATTTATGTATGTGCCTGCCTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGTCAGTTGTCTTAGGTCTAGAGATTTATGTATGTGCCTGCCTTAG  350

seq1  TTAGGGTTTTACTGCTGTGAACAGGCACCATGACCAAGGCAACTGTTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGTTTTACTGCTGTGAACAGGCACCATGACCAAGGCAACTGTTATA  400

seq1  AAGACATTTAAGTGGGGCTGGCTTACAGGTTCAGAGGTTCAGTCCATTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATTTAAGTGGGGCTGGCTTACAGGTTCAGAGGTTCAGTCCATTAT  450

seq1  TATCAAGGCTGGAACATGGCATCATGCAGGCAGGCATGGTGCAGGAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAGGCTGGAACATGGCATCATGCAGGCAGGCATGGTGCAGGAGGAA  500

seq1  ATGAGAGTTCTACATCTTCATCTGAAGGCTGTTAGCAGAGTACTGACTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAGTTCTACATCTTCATCTGAAGGCTGTTAGCAGAGTACTGACTTC  550

seq1  CTAGCAGCTAGGACTAGGGTATTATAGCCCACTCCCACTGTGACACACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAGCTAGGACTAGGGTATTATAGCCCACTCCCACTGTGACACACCT  600

seq1  ACTCCAACAAGGCTACCACTCCTAATAGTGCCACTCCCTGGCCTAAGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAACAAGGCTACCACTCCTAATAGTGCCACTCCCTGGCCTAAGCAT  650

seq1  TTACAAACCATCACAGAGATGATATATTGTGAGTCAACTCTCCTGGCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAACCATCACAGAGATGATATATTGTGAGTCAACTCTCCTGGCAAA  700

seq1  GGCAGAGGAGGGAAAATCTGGGAAATGTGTGACTCCAGGGCCAGCGAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGGAGGGAAAATCTGGGAAATGTGTGACTCCAGGGCCAGCGAGAT  750

seq1  GGCTCAGCAGGTAAAAGTGCATGCCTCTAAGTGAGAGTTCACCTGGGACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAGCAGGTAAAAGTGCATGCCTCTAAGTGAGAGTTCACCTGGGACT  800

seq1  CACACAGTGAACGAAAGGAGAGAGAAAAAAATGTCCTGCAAGGTGCCCTC  850
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CACACAGTGAACGAAAGGAGAGAG-AAAAAATGTCCTGCAAGGTGCCCTC  849

seq1  TGACCATACTCTCACCATGGACATATGCTTACACACATGCACAAATTAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATACTCTCACCATGGACATATGCTTACACACATGCACAAATTAAC  899

seq1  GACAAAGAAAGATGTAGTCTTCATAGAAACTTACTAGATTCATGGGGTAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGAAAGATGTAGTCTTCATAGAAACTTACTAGATTCATGGGGTAG  949

seq1  TCAGCCAGATTCCATGGGGGAGAGGTCAGCACTTGAAGTTCTAGGTCAGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCAGATTCCATGGGGGAGAGGTCAGCACTTGAAGTTCTAGGTCAGA  999

seq1  AGGCAGCCTCCACTC-TGCTCAAGGCCATGGTCAGAAGAAGTGGGTAATT  1049
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGGCAGCCTCCACTCTTGCTCAAGGCCATGGTCAGAAGAAGTGGGTAATT  1049

seq1  GTGTGAACTCTCACCAGTCAACCATAACAGTAGCAGAACTGGGCTCA-CT  1098
      ||||||||||||| ||||| || |||| |||| |  ||||||| |||  |
seq2  GTGTGAACTCTCA-CAGTC-ACAATAA-AGTAAC-TAACTGGGTTCATGT  1095

seq1  GACCTGCTAGAGCTGGAAGCATCCGGTGTGAAAGCTTTTGTA  1140
      |||||||||   |||||||||||||  | | |||||||||||
seq2  GACCTGCTAAGCCTGGAAGCATCCG--GGGGAAGCTTTTGTA  1135

seq1: chr8_113996893_113998037
seq2: B6Ng01-146O01.g_69_1215 (reverse)

seq1  GGACTCTGGCA-GGCCTAAGGTC-CTGCTGCAAGTGGAGAAA-CAAGCAA  47
      ||||||| |||  |||||||||| ||||  |||||||||||| ||||| |
seq2  GGACTCTAGCACAGCCTAAGGTCTCTGC--CAAGTGGAGAAACCAAGC-A  47

seq1  AGAGTTTCCCCGTCGCCTCACAGGTGTGAAGAACACAGCA-GAGCACACT  96
      |||| || | |||  |||| | ||   ||||| || |||| |||||||||
seq2  AGAG-TTACTCGTTCCCTCCCCGGGTGGAAGACCA-AGCAGGAGCACACT  95

seq1  CTTGTTCC-TCCTAGGC-TCTGTTCCCA-GTGCGGCTGGGGAGCAGCTTG  143
        |||||| ||||| || | |||||||| |||||||| ||||||||| ||
seq2  TCTGTTCCTTCCTAAGCATTTGTTCCCATGTGCGGCTAGGGAGCAGC-TG  144

seq1  GTGACTGAATGTCTTAGTACCAGGACTGCAAAACCTATTCCTGAACAATG  193
       |||||||||||| |||| |||||||||||||||||| ||||  ||||||
seq2  TTGACTGAATGTC-TAGT-CCAGGACTGCAAAACCTA-TCCTTGACAATG  191

seq1  CCAGGGGACCCAGGAGCTAAGCTGAG-AGGGCACTCCCTAGTACTCCAGC  242
      ||||||||||||| |||||||||||| |||||||||||||||||||||||
seq2  CCAGGGGACCCAGAAGCTAAGCTGAGAAGGGCACTCCCTAGTACTCCAGC  241

seq1  ATCAGATAAGCAGTATACCATACTGTTTGTGGAG-ATCAGATCCTACTCC  291
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATCAGATAAGCAGTATACCATACTGTTTGTGGAGAATCAGATCCTACTCC  291

seq1  ATTAACTTAAAGGCCTCTTCAGTTATTTACATCAGAGCTATTTTAGTAAT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACTTAAAGGCCTCTTCAGTTATTTACATCAGAGCTATTTTAGTAAT  341

seq1  GGAAACTGAAGCAGAGATGAGAGGCTGCAAAATTTGGAAAATGCCT-ATA  390
      || ||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGGAACTGAAGCAGAGATGAGAGGCTGCAAAATTTGGAAAATGCCTAATA  391

seq1  GGTCAATGCTCAATATTTATTAGAAGATCCAGAATAAACAATATTTC-TT  439
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GGTCAATGCTCAATATTTATTAGAAGATCCAGAATAAACAATATTTCTTT  441

seq1  TGGCCTAATCTGTGCTGTGCTTTCTGATCTATATGAGATTTGACAGGTCT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTAATCTGTGCTGTGCTTTCTGATCTATATGAGATTTGACAGGTCT  491

seq1  TTAGGTCACTTACACTTAAGTTCTTAGTAGCAAACATAATTTCATCTAGA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTCACTTACACTTAAGTTCTTAGTAGCAAACATAATTTCATCTAGA  541

seq1  GAACACTGGGTGAATGCAAATTCAACCTAAGTCAGGCAGATTAAAAACAC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTGGGTGAATGCAAATTCAACCTAAGTCAGGCAGATTAAAAACAC  591

seq1  AAGAGAAATAAACCATGGTCTGCAGGAGGCTGCACGAGACCTGGGGAGCC  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAATAAACCATGGTCTGCAGGAGGCTGCACGAGACCTGGGGAGCC  641

seq1  CAGTGCACTTGCTCCTTGCTAGGCCTTAATGCAGGCCCATCTCGGTCCTT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCACTTGCTCCTTGCTAGGCCTTAATGCAGGCCCATCTCGGTCCTT  691

seq1  CTGCCTCCCTCTCCGAATACTCTCAGGGGCAGAGGTCAAGTGCACACAAG  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCCCTCTCCGAATACTCTCAGGGGCAGAGGTCAAGTGCACACAAG  741

seq1  AAAAATGTGGACACAGAAAATTTCAGTTAGCTGGAAATACTTCCAGAGCA  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGTGGACACAGAAAATTTCAGTTAGCTGGAAATACTTCCAGAGCA  791

seq1  AAAGTGGTCGGTAATACGGATGCAGGCCTCCTGAGGAGAAAACAGTCCTC  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGTCGGTAATACGGATGCAGGCCTCCTGAGGAGAAAACAGTCCTC  841

seq1  AGGACGGACTCATCGGCCTCCACAGCGAGGGCGAGGCCACACACAGGAGA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACGGACTCATCGGCCTCCACAGCGAGGGCGAGGCCACACACAGGAGA  891

seq1  GCATGGGGCTCCCACTGCTCCACTCCGTCAGCCTGCTCAGCTTAAAGAGA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGGGCTCCCACTGCTCCACTCCGTCAGCCTGCTCAGCTTAAAGAGA  941

seq1  CTACTGCATTACTGCATGAGGAAGCCTCAGGGAGAGGTGCGGTGGTTGCA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGCATTACTGCATGAGGAAGCCTCAGGGAGAGGTGCGGTGGTTGCA  991

seq1  AATTAACCACAAAACAACTGACATCTGTTTTGGACATCGTAAATACATTG  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAACCACAAAACAACTGACATCTGTTTTGGACATCGTAAATACATTG  1041

seq1  AACCACATGAAACCTTTAGATCGAAAGTGGTTAAATATAAGCAAGTGCCC  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACATGAAACCTTTAGATCGAAAGTGGTTAAATATAAGCAAGTGCCC  1091

seq1  ACAATTTACCTCCACAATTATTCTATGCCATTCTTGACTTGGGTGCCTGT  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTACCTCCACAATTATTCTATGCCATTCTTGACTTGGGTGCCTGT  1141

seq1  GAATTC  1145
      ||||||
seq2  GAATTC  1147