BAC Information

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BAC

Clone NameB6Ng01-147D08
Chromosome8 (Build37)
Map Location 79,656,077 - 79,805,864
singlet/doubletdoublet
Overlap geneNr3c2, Arhgap10
Upstream geneLOC100039185, EG631594, LOC666226, LOC100039211, LOC384847
Downstream geneLOC100039235, AI931714, Tmem34, Ednra, EG622803, Ttc29
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147D08.bB6Ng01-147D08.g
ACCDH944153DH944154
length885902
definitionDH944153|Mus musculus domesticus DNA, BAC clone: B6Ng01-147D08, 5' end.DH944154|Mus musculus domesticus DNA, BAC clone: B6Ng01-147D08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,804,978 - 79,805,864)(79,656,077 - 79,656,977)
sequence
gaattcagatgccctagtgtggtcccatttttgttttttgttttttcttt
ttctgcctggcccccacactctagccaaatccaatgacttaacagctctg
aaagctgccaggctctcacctgcctttcagctccgatgtttctcttcaga
gcctccgagtctggcagtaatttctccttattctgttgcatgtctcccac
atgtcttccagccctcccactgtcaggttttaaaactcgttatttctgag
tctcagagctccttgagagagtcccattatgcaaatgccaccttttgctc
tgtttattatcagctgtctcccatgttaaatgtgagcacctttgggctgg
ggactgatgttttaactgttaagttttgtccatgatgtgcctggtgagta
gtcagaagggcaggaaattagagatatttgtggtccggaagggatgcatc
agatggagcaacttctagccagtcttctgagaatacattgaaaattttag
atcccttattctctgctgagtcttggaggctcgtttcgtgtccatgctct
ttcttgtaacagagggcccatcgcgtttccccaagtctcttgattttgtc
tgggcaacacactgcttgtaaagagttaccaagcctgagacatggtttcc
accctcaaaacatctatgatgggagttgggtggcagtcaaggttaggctg
tgaaaccattgtgtggcagcaaaatgccaaactgatgctgctttcgttga
gagaggagagtgtgcaaacaggtgttggcgagtatttggtggaggtcagt
ttaggttgggtgttctgttgccttggtgactgttcaaaacacaagtttgt
tagtatcatttttgttctttctattcacaggacac
gaattccatataacccggctgcatggttgcgtctgacttggcaaaataga
gacaattgctctgatctcataggctcccttacagcaataaggactaaatt
atataatttgtaaatcagctaccacataatgagaatttaacaaatgttag
ttttctgcccagtgccctgaataacttaatagtttgtctctacaacagat
gttgttgtatagtgaagcccaaaagggtgaaagtcctagtatgggatgtg
aataggatgtaatacattcttgggaaaattatactatacatatatcatta
tcatcatcatctccttgttgcgaattcacttcatctactctttgtcatga
caagtgtttctttagtttaaaatcttccagcattttgatttctccatata
tttacttttattatcttttctgaaaagatgtttaaaatataagtcagcat
agttagcaaacacacacacatatatatacaagtgcatgtatttttagtga
aaaactaacacctttcactctaagaagagtgtttatgcttactcttcttc
ataacaaactcctgaaccagaaatccaatctgacttccaacttaaagtta
ggctcctgaaccctaacttttaagatcctctgtcaaggtggcagagacaa
cctatgctggagtctttctccaggcattttaaagcgcgttaatccgagct
cactctcaaaactcagcggcagcaggggatcattgtccattggcttatcg
tgggcaggccagactggtttttaactgagcagaggaagttaattatcctg
tgttttagttggctctaggaatgactaacagttcttgccgcaccccatct
caccgcagtctgagccggcttgggggatgggaatcgcacaccagaagtct
gc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_79804978_79805864
seq2: B6Ng01-147D08.b_42_926 (reverse)

seq1  GTGTCCTGTGAATAGAAAGAACAAAAATGATACTAACAAACTTCTGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GTGTCCTGTGAATAGAAAGAACAAAAATGATACTAACAAACTTGTGTTTT  50

seq1  GAACAGTCACCAAGGCAACAGGAACACCCAACCTAAACCTGACCTCCACC  100
      |||||||||||||||||||| |||||||||||||||| ||||||||||||
seq2  GAACAGTCACCAAGGCAACA-GAACACCCAACCTAAA-CTGACCTCCACC  98

seq1  AAATACTCGCCAACACCTGTTTGCACACTCTCCTCTCTCAACGAAAGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTCGCCAACACCTGTTTGCACACTCTCCTCTCTCAACGAAAGCAG  148

seq1  CATCAGTTTGGCATTTTGCTGCCACACAATGGTTTCACAGCCTAACCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGTTTGGCATTTTGCTGCCACACAATGGTTTCACAGCCTAACCTTG  198

seq1  ACTGCCACCCAACTCCCATCATAGATGTTTTGAGGGTGGAAACCATGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCACCCAACTCCCATCATAGATGTTTTGAGGGTGGAAACCATGTCT  248

seq1  CAGGCTTGGTAACTCTTTACAAGCAGTGTGTTGCCCAGACAAAATCAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTTGGTAACTCTTTACAAGCAGTGTGTTGCCCAGACAAAATCAAGA  298

seq1  GACTTGGGGAAACGCGATGGGCCCTCTGTTACAAGAAAGAGCATGGACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGGGGAAACGCGATGGGCCCTCTGTTACAAGAAAGAGCATGGACAC  348

seq1  GAAACGAGCCTCCAAGACTCAGCAGAGAATAAGGGATCTAAAATTTTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACGAGCCTCCAAGACTCAGCAGAGAATAAGGGATCTAAAATTTTCAA  398

seq1  TGTATTCTCAGAAGACTGGCTAGAAGTTGCTCCATCTGATGCATCCCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCTCAGAAGACTGGCTAGAAGTTGCTCCATCTGATGCATCCCTTC  448

seq1  CGGACCACAAATATCTCTAATTTCCTGCCCTTCTGACTACTCACCAGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACCACAAATATCTCTAATTTCCTGCCCTTCTGACTACTCACCAGGCA  498

seq1  CATCATGGACAAAACTTAACAGTTAAAACATCAGTCCCCAGCCCAAAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGGACAAAACTTAACAGTTAAAACATCAGTCCCCAGCCCAAAGGT  548

seq1  GCTCACATTTAACATGGGAGACAGCTGATAATAAACAGAGCAAAAGGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACATTTAACATGGGAGACAGCTGATAATAAACAGAGCAAAAGGTGG  598

seq1  CATTTGCATAATGGGACTCTCTCAAGGAGCTCTGAGACTCAGAAATAACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCATAATGGGACTCTCTCAAGGAGCTCTGAGACTCAGAAATAACG  648

seq1  AGTTTTAAAACCTGACAGTGGGAGGGCTGGAAGACATGTGGGAGACATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAAAACCTGACAGTGGGAGGGCTGGAAGACATGTGGGAGACATGC  698

seq1  AACAGAATAAGGAGAAATTACTGCCAGACTCGGAGGCTCTGAAGAGAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAATAAGGAGAAATTACTGCCAGACTCGGAGGCTCTGAAGAGAAAC  748

seq1  ATCGGAGCTGAAAGGCAGGTGAGAGCCTGGCAGCTTTCAGAGCTGTTAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGAGCTGAAAGGCAGGTGAGAGCCTGGCAGCTTTCAGAGCTGTTAAG  798

seq1  TCATTGGATTTGGCTAGAGTGTGGGGGCCAGGCAGAAAAAGAAAAAACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGGATTTGGCTAGAGTGTGGGGGCCAGGCAGAAAAAGAAAAAACAA  848

seq1  AAAACAAAAATGGGACCACACTAGGGCATCTGAATTC  887
      |||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAAATGGGACCACACTAGGGCATCTGAATTC  885

seq1: chr8_79656077_79656977
seq2: B6Ng01-147D08.g_69_970

seq1  GAATTCCATATAACCCGGCTGCATGGTTGCGTCTGACTTGGCAAAATAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATAACCCGGCTGCATGGTTGCGTCTGACTTGGCAAAATAGA  50

seq1  GACAATTGCTCTGATCTCATAGGCTCCCTTACAGCAATAAGGACTAAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATTGCTCTGATCTCATAGGCTCCCTTACAGCAATAAGGACTAAATT  100

seq1  ATATAATTTGTAAATCAGCTACCACATAATGAGAATTTAACAAATGTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATTTGTAAATCAGCTACCACATAATGAGAATTTAACAAATGTTAG  150

seq1  TTTTCTGCCCAGTGCCCTGAATAACTTAATAGTTTGTCTCTACAACAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGCCCAGTGCCCTGAATAACTTAATAGTTTGTCTCTACAACAGAT  200

seq1  GTTGTTGTATAGTGAAGCCCAAAAGGGTGAAAGTCCTAGTATGGGATGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGTATAGTGAAGCCCAAAAGGGTGAAAGTCCTAGTATGGGATGTG  250

seq1  AATAGGATGTAATACATTCTTGGGAAAATTATACTATACATATATCATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGATGTAATACATTCTTGGGAAAATTATACTATACATATATCATTA  300

seq1  TCATCATCATCTCCTTGTTGCGAATTCACTTCATCTACTCTTTGTCATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCATCATCTCCTTGTTGCGAATTCACTTCATCTACTCTTTGTCATGA  350

seq1  CAAGTGTTTCTTTAGTTTAAAATCTTCCAGCATTTTGATTTCTCCATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGTTTCTTTAGTTTAAAATCTTCCAGCATTTTGATTTCTCCATATA  400

seq1  TTTACTTTTATTATCTTTTCTGAAAAGATGTTTAAAATATAAGTCAGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTTTATTATCTTTTCTGAAAAGATGTTTAAAATATAAGTCAGCAT  450

seq1  AGTTAGCAAACACACACACATATATATACAAGTGCATGTATTTTTAGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGCAAACACACACACATATATATACAAGTGCATGTATTTTTAGTGA  500

seq1  AAAACTAACACCTTTCACTCTAAGAAGAGTGTTTATGCTTACTCTTCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTAACACCTTTCACTCTAAGAAGAGTGTTTATGCTTACTCTTCTTC  550

seq1  ATAACAAACTCCTGAACCAGAAATCCAATCTGACTTCCAACTTAAAGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAAACTCCTGAACCAGAAATCCAATCTGACTTCCAACTTAAAGTTA  600

seq1  GGCTCCTGAACCCTAAC-TTTAAGATCCTCTGTCAAGGTGGCAGAGACAA  649
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GGCTCCTGAACCCTAACTTTTAAGATCCTCTGTCAAGGTGGCAGAGACAA  650

seq1  CCTATGCTGGAGTCTTTCTCCAGGCATTTTAAAGCGCGTTAATCCGAGCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGCTGGAGTCTTTCTCCAGGCATTTTAAAGCGCGTTAATCCGAGCT  700

seq1  CACTCTCAAAACTCAGCGGCAGCAGGGGATCATTGTCCATTGGCTTATCG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTCAAAACTCAGCGGCAGCAGGGGATCATTGTCCATTGGCTTATCG  750

seq1  TGGGCAGGCCAGACTGG-TTTTAACTGAGCAGAGGAAGTTAATTATCCTG  798
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGGGCAGGCCAGACTGGTTTTTAACTGAGCAGAGGAAGTTAATTATCCTG  800

seq1  TGTTTTAGTTGGCTCTAGGAATGACTAACCAGTTCTTGCCGCACCCCATC  848
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGTTTTAGTTGGCTCTAGGAATGACTAA-CAGTTCTTGCCGCACCCCATC  849

seq1  TCACCGCAGTCTGAGCCGGCATGGGGGATGGGAAATCGCACACCAG-AGT  897
      |||||||||||||||||||| ||||||||||| ||||||||||||| |||
seq2  TCACCGCAGTCTGAGCCGGCTTGGGGGATGGG-AATCGCACACCAGAAGT  898

seq1  CTGC  901
      ||||
seq2  CTGC  902