BAC Information

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BAC

Clone NameB6Ng01-148B03
Chromosome8 (Build37)
Map Location 22,907,738 - 22,908,881
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041654, EG574083, AY761185, Defcr21, LOC100038926, Defcr23, LOC100041688, Defcr25, LOC626605, LOC634825, LOC100040619, LOC100038927, Defcr22, Defcr-rs7, LOC100041759, LOC672740, EG665969, LOC100041787, Defcr3, Defcr5, LOC100041811, Defcr-rs1, LOC100040668, LOC100041843, LOC100040678, EG665927, LOC100040693, Defcr20, LOC100041890, LOC100041895, EG626682, LOC100040706, EG665956, LOC635093, Defcr26, Defcr17, LOC100041952, Defcr-ps1, AY761184, LOC100040729, Defcr24, LOC100040739, Defb1
Downstream geneDefb50, Defb2, Defb10, Defb9, Defb11, Defb15, Defb35, Defb13, C86695, Ccdc70, Atp7b, Alg11, Nek5, Nek3, Ckap2, Vps36, Rpl30-ps2, Thsd1, Tpte, Slc25a15, LOC547006, Mrps31, AI316807, Slc20a2, LOC100040803, Vdac3, Dkk4, Polb, Ikbkb, Plat, Ap3m2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148B03.bB6Ng01-148B03.g
ACCDH944776DH944777
length1,118127
definitionDH944776|Mus musculus domesticus DNA, BAC clone: B6Ng01-148B03, 5' end.DH944777|Mus musculus domesticus DNA, BAC clone: B6Ng01-148B03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtaaagttttgctacttgccaccagagcggtagtccgtctgtc
tctttaaagcgttcgtgaagctggtctttgtcaatggggcatttttagat
gaccaagcgatgctgataaagaaatttaagatacagtgtattgtgtctgg
aaagcctgtcttcttccccctcatccctcatccctgatcatatgcccctc
tccccttttgttttctacatgcttcatatattccagatgttaactgtcta
ccaaacctataacagacagaatagtttcccaatctgtggaattccccatc
atttgactgtacagaagcgtttcagttttatgaggttccattagtgaatt
gttggccttaattcctgatcttttggagtccaattcagaaagtctttacc
tacccctgtgtcttattgtcttacagtatactgccttttttttttttctt
ctgtcagcctcagagttacaggtttcacattaatgtctttggtccagttg
agtttgatttttgtacagagtgatagatttgagtctaattttattttgca
tgtacacacccaggttttccagcaccatttgttgaagatgctatgttttg
ttttttgtttttttgttttcttgtttttttcggcgtgtattttggtcctc
tttgtcagataccagaggactgtagttatgtgtattatatttgaggtttc
tatttttttcccttgatctaaatgtctgttttgtttcagtacaattctgt
ttttattagcgaagaacataaccaagagtcttaatggagggttgcagttg
agaggcttgggatcattgggatatgaacatggatttgccagtctaacata
cttacacttttctacccactctacaaggatccagaggacaatctcttacc
atggctgtgagaaatacatttgtgaagtggcctcagtgacaaagcattga
ctgtgaccactaatttggaaagcatgtgtgatgaagtgactggttctagg
gagtgagaacaagtagtactataacctccaaggagagagactggcgctga
atgaaacgatcatgtaattcagatagccccacagggaccatctgtaagat
tgtgataagatggtcttg
ctgaaaacctgcttcccaactttatttgtaaaataaaggagagctgatga
ctaggcagataacagggaaggtggagcaggatgggggagagggaagaagg
agaaaatggaagagggagagagaggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_22907738_22908881
seq2: B6Ng01-148B03.b_44_1161 (reverse)

seq1  CAAGACCCCAATCTTACTACACAATCTTACAGATGGTCCCTGGTGAGGCT  50
      |||||||   ||||||   |||||||||||||||||||||| ||| ||||
seq2  CAAGACC---ATCTTA--TCACAATCTTACAGATGGTCCCT-GTGGGGCT  44

seq1  ATCCTGAATTTTACAATGATTCTGTTTTTCATTTCAGCGCCAGTCCCTCT  100
      || |||||  |||| |||||      ||||| ||||||||||||  ||||
seq2  AT-CTGAA--TTAC-ATGAT----CGTTTCA-TTCAGCGCCAGT--CTCT  83

seq1  CTCCTTTGGAGGTTATAAGTTACTACTTGGTTTCTCACTCCCTAGAACCA  150
      |||| ||||||||||||   |||||||||  |||||||||||||||||||
seq2  CTCC-TTGGAGGTTATA--GTACTACTTG--TTCTCACTCCCTAGAACCA  128

seq1  GTCACCTTCATCACACATTGCTTTCCAAATTTAGTGGTCACAGTCAATTG  200
      |||| |||||||||||| ||||||||||| ||||||||||||||||| ||
seq2  GTCA-CTTCATCACACA-TGCTTTCCAAA-TTAGTGGTCACAGTCAA-TG  174

seq1  CTTTGTTCACTGAGGCCACTTCACAAATGTATTTCTCACAGCCATGGTAA  250
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTG-TCACTGAGGCCACTTCACAAATGTATTTCTCACAGCCATGGTAA  223

seq1  GAGATTGTCCTCTGGATCCTTGTAGAGTGGGTAG-AAAGTGTAAGTATGT  299
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GAGATTGTCCTCTGGATCCTTGTAGAGTGGGTAGAAAAGTGTAAGTATGT  273

seq1  TAGACTGGCAAATCCATGTTCATATCCCAATGATCCCAAGCCTCTCAACT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTGGCAAATCCATGTTCATATCCCAATGATCCCAAGCCTCTCAACT  323

seq1  GCAACCCTCCATTAAGACTCTTGGTTATGTTCTTCGCTAATAAAAACAGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCCTCCATTAAGACTCTTGGTTATGTTCTTCGCTAATAAAAACAGA  373

seq1  ATTGTACTGAAACAAAACAGACATTTAGATCAAGGGAAAAAAATAGAAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTACTGAAACAAAACAGACATTTAGATCAAGGGAAAAAAATAGAAAC  423

seq1  CTCAAATATAATACACATAACTACAGTCCTCTGGTATCTGACAAAGAGGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATATAATACACATAACTACAGTCCTCTGGTATCTGACAAAGAGGA  473

seq1  CCAAAATACACGCCGAAAAAAACAAGAAAACAAAAAAACAAAAAACAAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATACACGCCGAAAAAAACAAGAAAACAAAAAAACAAAAAACAAAA  523

seq1  CATAGCATCTTCAACAAATGGTGCTGGAAAACCTGGGTGTGTACATGCAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCATCTTCAACAAATGGTGCTGGAAAACCTGGGTGTGTACATGCAA  573

seq1  AATAAAATTAGACTCAAATCTATCACTCTGTACAAAAATCAAACTCAACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATTAGACTCAAATCTATCACTCTGTACAAAAATCAAACTCAACT  623

seq1  GGACCAAAGACATTAATGTGAAACCTGTAACTCTGAGGCTGACAGAAGAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAAAGACATTAATGTGAAACCTGTAACTCTGAGGCTGACAGAAGAA  673

seq1  AAAAAAAAAAGGCAGTATACTGTAAGACAATAAGACACAGGGGTAGGTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAGGCAGTATACTGTAAGACAATAAGACACAGGGGTAGGTAA  723

seq1  AGACTTTCTGAATTGGACTCCAAAAGATCAGGAATTAAGGCCAACAATTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTCTGAATTGGACTCCAAAAGATCAGGAATTAAGGCCAACAATTC  773

seq1  ACTAATGGAACCTCATAAAACTGAAACGCTTCTGTACAGTCAAATGATGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATGGAACCTCATAAAACTGAAACGCTTCTGTACAGTCAAATGATGG  823

seq1  GGAATTCCACAGATTGGGAAACTATTCTGTCTGTTATAGGTTTGGTAGAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCCACAGATTGGGAAACTATTCTGTCTGTTATAGGTTTGGTAGAC  873

seq1  AGTTAACATCTGGAATATATGAAGCATGTAGAAAACAAAAGGGGAGAGGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAACATCTGGAATATATGAAGCATGTAGAAAACAAAAGGGGAGAGGG  923

seq1  GCATATGATCAGGGATGAGGGATGAGGGGGAAGAAGACAGGCTTTCCAGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATGATCAGGGATGAGGGATGAGGGGGAAGAAGACAGGCTTTCCAGA  973

seq1  CACAATACACTGTATCTTAAATTTCTTTATCAGCATCGCTTGGTCATCTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATACACTGTATCTTAAATTTCTTTATCAGCATCGCTTGGTCATCTA  1023

seq1  AAAATGCCCCATTGACAAAGACCAGCTTCACGAACGCTTTAAAGAGACAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCCCCATTGACAAAGACCAGCTTCACGAACGCTTTAAAGAGACAG  1073

seq1  ACGGACTACCGCTCTGGTGGCAAGTAGCAAAACTTTACTGAATTC  1144
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGACTACCGCTCTGGTGGCAAGTAGCAAAACTTTACTGAATTC  1118