BAC Information

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BAC

Clone NameB6Ng01-148E23
Chromosome8 (Build37)
Map Location 128,885,773 - 129,051,606
singlet/doubletdoublet
Overlap geneSlc35f3, 1810063B05Rik, EG619653
Upstream geneSipa1l2, 4933403G14Rik, 2310079N02Rik, E330039K12Rik, BC021891, Kcnk1, LOC668434
Downstream geneIrf2bp2, Tomm20, Rbm34, LOC100043368, Gabarapl2-ps8_1688.1, Pard3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148E23.bB6Ng01-148E23.g
ACCDH944959DH944960
length9391,085
definitionDH944959|Mus musculus domesticus DNA, BAC clone: B6Ng01-148E23, 5' end.DH944960|Mus musculus domesticus DNA, BAC clone: B6Ng01-148E23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,050,642 - 129,051,606)(128,885,773 - 128,886,841)
sequence
gaattcactctgtagaacaggctggccttgaactcacagcgatccacctg
cctctgactcctgagttctgggatcaaaggcgcatgccaccaccgcctgg
cagcttacaccttttccacactgactccttgtcagctgccagaaagccag
tctctacctctttgctcaaggctgaaaagggctggacttgtgagagctcc
gggtcactttcactgcctttcagggaccagcatcaaacacttccctcttt
atgaagggacgcctccctgctggagaccatgcccctccttatggtcaggg
ctcatttccttagccagagaagataaggacctgccaagtcctctctgagc
ctgctctgcagctcagtcaggatgtcctgttgagttgcgatggtgtgtcc
ttgagaattagattattgttgttttgaggcagccatctcgacccgactca
tggctgagggagccgccctcgccctcgtctggcttcactgaggagttctg
ctgctgccgggtctatttgagttatgtaacataaacagctccaaggagat
gggcttcccggcttttgtttttcctcttgtctccacagagcattgcctgg
gtggtgttgctggccgtctctgctctgttctgagaacaaaacagccctgc
cttgaccttctctggggcctttcctctccactgcccatgcaggggcaaag
aaaccgaaggacaccaaagctatctgtgatctcttcaagagtttgtccag
acctgagatggtgggtggatatcagccctttctgtagcctcttgtgagaa
gtaattacatactcaaacacacaggcgagcatacatgtacccgcgcacgt
atacacacacccacatacgtacgtacgtacccacgcacgcacagcgtgca
tgcgcaagcattcacacagttttcttttcttttctttcc
gaattcacacacacacacacacacacacacacacacacacacacacatat
atacacacatacaaacacacacattccagcacacatgcacacacacacac
acacacacatgcacagttcagaacacacacacagtccagcacacacacag
agtgagtgagagagagtccagcacacgtgcatacacacacttacacacac
atacatagtccagcacacacacagagtccagcacatataccacatatgca
cagtccagcacacacatacacacacacccccaaaggccttgcatttgagt
ctacgcacaagagcacacagtctgttgcagagaacagctagggctcatct
gcctcaggcacaccctgctcatcctctcagactcttccttctccatggga
gccttagtcggatatcagcagaagccagtggatttctcatcgtgtgccca
gttttgtttccctggcttaaagaaggttggaagatcccagaaagatggca
gaatgtgttttattgtcattcatctccaatgaaaatttgaaagaaggggg
agaactcagggccataaattctagccaggaaagctcgccctgaagcagga
tccatagcatgtgcatcccttccttgtttgttcgttcttctcttcccttc
ctctttttcaagtgcagcagagcaatcaatcccagggccccgtgcgtgct
tggcaagctctctacctctgagggatatctacaaccctttgtctctttga
ggaatcactctttggtagcccaagctgggccttaactctcttcctccctc
tgccttctgagtgctgggggttccaacctacagcacagggggcttgcaga
gacagctcagtgggtaaagcatttggcatgcaagcatgaggacttgaatt
cagatccctggaactcatgtagagccagatacaagagcctgttgtttgga
atttcattaatttcaatatgacagagaggaaaattaccagagggtccctg
ggctggctattgtgtttcacctctaaacaaagaaccaagtgttcctgtgt
ccaactaagtgtgaaagaaaggggtagaacactac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_129050642_129051606
seq2: B6Ng01-148E23.b_45_983 (reverse)

seq1  GGAAAGAAAAGAAAAGAAAAGAAAGGAAAAGAAAAGAAAAGAAAAACTGT  50
                               | |||||||||||||| ||||||||
seq2  -------------------------GGAAAGAAAAGAAAAG-AAAACTGT  24

seq1  GTGAATGCTTGCGCATGCACGCTGTGCGTGCGTGGGTACGTACGTACGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGCTTGCGCATGCACGCTGTGCGTGCGTGGGTACGTACGTACGTA  74

seq1  TGTGGGTGTGTGTATACGTGCGCGGGTACATGTATGCTCGCCTGTGTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGTGTGTGTATACGTGCGCGGGTACATGTATGCTCGCCTGTGTGTT  124

seq1  TGAGTATGTAATTACTTCTCACAAGAGGCTACAGAAAGGGCTGATATCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATGTAATTACTTCTCACAAGAGGCTACAGAAAGGGCTGATATCCA  174

seq1  CCCACCATCTCAGGTCTGGACAAACTCTTGAAGAGATCACAGATAGCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCATCTCAGGTCTGGACAAACTCTTGAAGAGATCACAGATAGCTTT  224

seq1  GGTGTCCTTCGGTTTCTTTGCCCCTGCATGGGCAGTGGAGAGGAAAGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCCTTCGGTTTCTTTGCCCCTGCATGGGCAGTGGAGAGGAAAGGCC  274

seq1  CCAGAGAAGGTCAAGGCAGGGCTGTTTTGTTCTCAGAACAGAGCAGAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGAAGGTCAAGGCAGGGCTGTTTTGTTCTCAGAACAGAGCAGAGAC  324

seq1  GGCCAGCAACACCACCCAGGCAATGCTCTGTGGAGACAAGAGGAAAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGCAACACCACCCAGGCAATGCTCTGTGGAGACAAGAGGAAAAACA  374

seq1  AAAGCCGGGAAGCCCATCTCCTTGGAGCTGTTTATGTTACATAACTCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCGGGAAGCCCATCTCCTTGGAGCTGTTTATGTTACATAACTCAAA  424

seq1  TAGACCCGGCAGCAGCAGAACTCCTCAGTGAAGCCAGACGAGGGCGAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCCGGCAGCAGCAGAACTCCTCAGTGAAGCCAGACGAGGGCGAGGG  474

seq1  CGGCTCCCTCAGCCATGAGTCGGGTCGAGATGGCTGCCTCAAAACAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTCCCTCAGCCATGAGTCGGGTCGAGATGGCTGCCTCAAAACAACAA  524

seq1  TAATCTAATTCTCAAGGACACACCATCGCAACTCAACAGGACATCCTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTAATTCTCAAGGACACACCATCGCAACTCAACAGGACATCCTGAC  574

seq1  TGAGCTGCAGAGCAGGCTCAGAGAGGACTTGGCAGGTCCTTATCTTCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTGCAGAGCAGGCTCAGAGAGGACTTGGCAGGTCCTTATCTTCTCT  624

seq1  GGCTAAGGAAATGAGCCCTGACCATAAGGAGGGGCATGGTCTCCAGCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAAGGAAATGAGCCCTGACCATAAGGAGGGGCATGGTCTCCAGCAGG  674

seq1  GAGGCGTCCCTTCATAAAGAGGGAAGTGTTTGATGCTGGTCCCTGAAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCGTCCCTTCATAAAGAGGGAAGTGTTTGATGCTGGTCCCTGAAAGG  724

seq1  CAGTGAAAGTGACCCGGAGCTCTCACAAGTCCAGCCCTTTTCAGCCTTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAAAGTGACCCGGAGCTCTCACAAGTCCAGCCCTTTTCAGCCTTGA  774

seq1  GCAAAGAGGTAGAGACTGGCTTTCTGGCAGCTGACAAGGAGTCAGTGTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGAGGTAGAGACTGGCTTTCTGGCAGCTGACAAGGAGTCAGTGTGG  824

seq1  AAAAGGTGTAAGCTGCCAGGCGGTGGTGGCATGCGCCTTTGATCCCAGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTGTAAGCTGCCAGGCGGTGGTGGCATGCGCCTTTGATCCCAGAA  874

seq1  CTCAGGAGTCAGAGGCAGGTGGATCGCTGTGAGTTCAAGGCCAGCCTGTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGAGTCAGAGGCAGGTGGATCGCTGTGAGTTCAAGGCCAGCCTGTT  924

seq1  CTACAGAGTGAATTC  965
      |||||||||||||||
seq2  CTACAGAGTGAATTC  939

seq1: chr8_128885773_128886841
seq2: B6Ng01-148E23.g_68_1152

seq1  GAATTCACACACACACACACACACACACACACACACACACACACACATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACACACACACACACACACACACACACACACACACACACATAT  50

seq1  ATACACACATACAAACACACACATTCCAGCACACATGCACACACACACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACATACAAACACACACATTCCAGCACACATGCACACACACACAC  100

seq1  ACACACACATGCACAGTTCAGAACACACACACAGTCCAGCACACACACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACATGCACAGTTCAGAACACACACACAGTCCAGCACACACACAG  150

seq1  AGTGAGTGAGAGAGAGTCCAGCACACGTGCATACACACACTTACACACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTGAGAGAGAGTCCAGCACACGTGCATACACACACTTACACACAC  200

seq1  ATACATAGTCCAGCACACACACAGAGTCCAGCACATATACCACATATGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATAGTCCAGCACACACACAGAGTCCAGCACATATACCACATATGCA  250

seq1  CAGTCCAGCACACACATACACACACACCCCCAAAGGCCTTGCATTTGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCAGCACACACATACACACACACCCCCAAAGGCCTTGCATTTGAGT  300

seq1  CTACGCACAAGAGCACACAGTCTGTTGCAGAGAACAGCTAGGGCTCATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACGCACAAGAGCACACAGTCTGTTGCAGAGAACAGCTAGGGCTCATCT  350

seq1  GCCTCAGGCACACCCTGCTCATCCTCTCAGACTCTTCCTTCTCCATGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGGCACACCCTGCTCATCCTCTCAGACTCTTCCTTCTCCATGGGA  400

seq1  GCCTTAGTCGGATATCAGCAGAAGCCAGTGGATTTCTCATCGTGTGCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTAGTCGGATATCAGCAGAAGCCAGTGGATTTCTCATCGTGTGCCCA  450

seq1  GTTTTGTTTCCCTGGCTTAAAGAAGGTTGGAAGATCCCAGAAAGATGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTCCCTGGCTTAAAGAAGGTTGGAAGATCCCAGAAAGATGGCA  500

seq1  GAATGTGTTTTATTGTCATTCATCTCCAATGAAAATTTGAAAGAAGGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGTTTTATTGTCATTCATCTCCAATGAAAATTTGAAAGAAGGGGG  550

seq1  AGAACTCAGGGCCATAAATTCTAGCCAGGAAAGCTCGCCCTGAAGCAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCAGGGCCATAAATTCTAGCCAGGAAAGCTCGCCCTGAAGCAGGA  600

seq1  TCCATAGCATGTGCATCCCTTCCTTGTTTGTTCGTTCTTCTCTTCCCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAGCATGTGCATCCCTTCCTTGTTTGTTCGTTCTTCTCTTCCCTTC  650

seq1  CTC-TTTTCAAGTGCAGCAGAGCAATCAATCCCAGGGCCCCGTGCGTGCT  699
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTTCAAGTGCAGCAGAGCAATCAATCCCAGGGCCCCGTGCGTGCT  700

seq1  TGGCAAGCTCTCTACCTCTGAGGGATATCTACAACCCTTTGTCTCTTTGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAGCTCTCTACCTCTGAGGGATATCTACAACCCTTTGTCTCTTTGA  750

seq1  GGAATCACTC-TTGGTAGCCCAAGCTGGCCTTAAACTCTCTTCCTCCCTC  798
      |||||||||| ||||||||||||||||| | | |||||||||||||||||
seq2  GGAATCACTCTTTGGTAGCCCAAGCTGGGCCTTAACTCTCTTCCTCCCTC  800

seq1  TGCCTTCTGAGTGCT-GGGGTTCCAACCTACAGCACAGGGG--CTGCAGA  845
      ||||||||||||||| |||||||||||||||||||||||||   ||||||
seq2  TGCCTTCTGAGTGCTGGGGGTTCCAACCTACAGCACAGGGGGCTTGCAGA  850

seq1  GACAGCTCAGTGGGTAAAGCATTTGCCATGCAAGCATGAGGACTTGAATT  895
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GACAGCTCAGTGGGTAAAGCATTTGGCATGCAAGCATGAGGACTTGAATT  900

seq1  CAGATCCCTGGAACTCATGTAGAGCCAGATACAAGAGCCTG-TGTTTGGA  944
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CAGATCCCTGGAACTCATGTAGAGCCAGATACAAGAGCCTGTTGTTTGGA  950

seq1  ATTTCATT-ATTCCAATATGACAGAGAGGAAAATTACCAGAGGGTCACT-  992
      |||||||| ||| ||||||||||||||||||||||||||||||||| || 
seq2  ATTTCATTAATTTCAATATGACAGAGAGGAAAATTACCAGAGGGTCCCTG  1000

seq1  GGCTGGCTATTGTGTTTCA---CTCAACAAAGAA-CAAGTGGTCCTGTGT  1038
      |||||||||||||||||||   || ||||||||| |||||| ||||||||
seq2  GGCTGGCTATTGTGTTTCACCTCTAAACAAAGAACCAAGTGTTCCTGTGT  1050

seq1  CAAACTA--GGTGGAAGAAA-GGGTAG-ACACTAC  1069
      | |||||   ||| |||||| |||||| |||||||
seq2  CCAACTAAGTGTGAAAGAAAGGGGTAGAACACTAC  1085