BAC Information

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BAC

Clone NameB6Ng01-148J05
Chromosome8 (Build37)
Map Location 117,955,351 - 118,102,061
singlet/doubletdoublet
Overlap genenone
Upstream geneWwox
Downstream geneMaf, LOC384868, LOC668233, Dynlrb2, Cdyl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148J05.bB6Ng01-148J05.g
ACCDH945139DH945140
length521920
definitionDH945139|Mus musculus domesticus DNA, BAC clone: B6Ng01-148J05, 5' end.DH945140|Mus musculus domesticus DNA, BAC clone: B6Ng01-148J05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,955,351 - 117,955,871)(118,101,135 - 118,102,061)
sequence
gaattccaaatatgagaaatagagctgaggagactcagttggcacagcca
ttggctatgaagcataaggacccaagttcaaatccctagcaaccacaggg
aaaagcaggagtggtggagtaggtgactgtaacctcagagctggacaggg
ctagagcatggagggcggagagaagagaatcccttaggattgctggacaa
cctgcctatttggtgagagtccctgcctcaaaaaataaaatgacgcatgt
ggtggtttgaatgaatgtcatacatattagctaatggccacgtgaatcct
tccgtcctagttggtgataactgtttaggtagctttaggaggtgtggcct
tgcttgaggatatttgttacgatgggtcggctctgagatttcaagatcca
ttcattccagggcctaggttctgcttcctgttagggttgttggagatcta
agctctcagctgtggatctagctacccgctccctctgttctgccaacatg
cactccccttggatccgcaag
gaattcaggaatgaaacagactacagagccccaaataaaataagatacac
aggagaatacgtagtgtatcatacaagtaatatttccaattaagataaaa
cagatgactgagataactggatatctacatttttgctagttacctacgta
cattttattttaaaattacatgaaatatttaaaattttggaataagatct
tgagagtcatatgccaaatgctacaggaaaatattaataaatttggttac
tgtcatggcgagttttaattgtcaggtcaatacaacttagaaccatcagg
gaagaacatctcaaggaaggactgactagattaggttggcctgtcggcac
atccatcgtgggctgtgttcatttcgttgaatgatatgggaagattctgc
cccaaagaagctgtaccattccctgggtttgatcctattctgcatcatca
ttaaaaaaaaaaaaaaaaaaaaaaaaaggtgaaattgagctgagtacaag
caagcatacattctctctctctctctctctctgtctctcctctctctatg
tctctctgtctctctctctctgtctctgtctctctgtctctctctctgtc
tctgtctctgtctctctctctctctctctctccctctctctctctctctg
aattagactgtgaacgggatcagttgcatctccctggtaagataggctct
agcctggacctgtgagttaaaatgagcactttctctcctaagttgctttt
gttgatattttatcataagagagacaaagcacagttaccacgcactgcaa
accatttacataatagacagcatagacagatcatgaactttgtttagggg
acatttcagcagatatggaaacctagtgcatgaactccctggggatttag
gtatgtgggtgggggtggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_117955351_117955871
seq2: B6Ng01-148J05.b_47_567

seq1  GAATTCCAAATATGAGAAATAGAGCTGAGGAGACTCAGTTGGCACAGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAATATGAGAAATAGAGCTGAGGAGACTCAGTTGGCACAGCCA  50

seq1  TTGGCTATGAAGCATAAGGACCCAAGTTCAAATCCCTAGCAACCACAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTATGAAGCATAAGGACCCAAGTTCAAATCCCTAGCAACCACAGGG  100

seq1  AAAAGCAGGAGTGGTGGAGTAGGTGACTGTAACCTCAGAGCTGGACAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAGGAGTGGTGGAGTAGGTGACTGTAACCTCAGAGCTGGACAGGG  150

seq1  CTAGAGCATGGAGGGCGGAGAGAAGAGAATCCCTTAGGATTGCTGGACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGCATGGAGGGCGGAGAGAAGAGAATCCCTTAGGATTGCTGGACAA  200

seq1  CCTGCCTATTTGGTGAGAGTCCCTGCCTCAAAAAATAAAATGACGCATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTATTTGGTGAGAGTCCCTGCCTCAAAAAATAAAATGACGCATGT  250

seq1  GGTGGTTTGAATGAATGTCATACATATTAGCTAATGGCCACGTGAATCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTTTGAATGAATGTCATACATATTAGCTAATGGCCACGTGAATCCT  300

seq1  TCCGTCCTAGTTGGTGATAACTGTTTAGGTAGCTTTAGGAGGTGTGGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTCCTAGTTGGTGATAACTGTTTAGGTAGCTTTAGGAGGTGTGGCCT  350

seq1  TGCTTGAGGATATTTGTTACGATGGGTCGGCTCTGAGATTTCAAGATCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGAGGATATTTGTTACGATGGGTCGGCTCTGAGATTTCAAGATCCA  400

seq1  TTCATTCCAGGGCCTAGGTTCTGCTTCCTGTTAGGGTTGTTGGAGATCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCCAGGGCCTAGGTTCTGCTTCCTGTTAGGGTTGTTGGAGATCTA  450

seq1  AGCTCTCAGCTGTGGATCTAGCTACCCGCTCCCTCTGTTCTGCCAACATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTCAGCTGTGGATCTAGCTACCCGCTCCCTCTGTTCTGCCAACATG  500

seq1  CACTCCCCTTGGATCCGCAAG  521
      |||||||||||||||||||||
seq2  CACTCCCCTTGGATCCGCAAG  521

seq1: chr8_118101135_118102061
seq2: B6Ng01-148J05.g_67_986 (reverse)

seq1  CCCCACCCCCACCCACATACCCTAAATCCCCAGGGAGTTCATTGCACTAG  50
      | ||||||||||||||||| ||||||||||||||||||||| ||||||||
seq2  CTCCACCCCCACCCACATA-CCTAAATCCCCAGGGAGTTCA-TGCACTAG  48

seq1  GTTTCCATATCCTTGCTGAAATGTCCCCTAAAACAAAGTTCCTGATCTTG  100
      |||||||||||  |||||||||||||||| ||||||||||| ||||| ||
seq2  GTTTCCATATC--TGCTGAAATGTCCCCT-AAACAAAGTTCATGATC-TG  94

seq1  TCTATGCTGTCTTATTATGTAAATGGTTTGCAGTGCGTGGTAACTGTGCT  150
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TCTATGCTGTC-TATTATGTAAATGGTTTGCAGTGCGTGGTAACTGTGCT  143

seq1  TTGTCTCTCTTATGATAAAATATCAACAAAAGCAACTTAGGAGAGAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCTCTTATGATAAAATATCAACAAAAGCAACTTAGGAGAGAAAGT  193

seq1  GCTCATTTTAACTCACAGGTCCAGGCTAGAGCCTATCTTACCAGGGAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATTTTAACTCACAGGTCCAGGCTAGAGCCTATCTTACCAGGGAGAT  243

seq1  GCAACTGATCCCGTTCACAGTCTAATTCAGAGAGAGAGAGAGAGGGAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTGATCCCGTTCACAGTCTAATTCAGAGAGAGAGAGAGAGGGAGAG  293

seq1  AGAGAGAGAGAGAGAGACAGAGACAGAGACAGAGAGAGAGACAGAGAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGACAGAGACAGAGACAGAGAGAGAGACAGAGAGAC  343

seq1  AGAGACAGAGAGAGAGAGACAGAGAGACATAGAGAGAGGAGAGACAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGAGAGAGAGAGACAGAGAGACATAGAGAGAGGAGAGACAGAGA  393

seq1  GAGAGAGAGAGAGAGAATGTATGCTTGCTTGTACTCAGCTCAATTTCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAATGTATGCTTGCTTGTACTCAGCTCAATTTCACC  443

seq1  TTTTTTTTTTTTTTTTTTTTTTTTTAATGATGATGCAGAATAGGATCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTTTTTTTAATGATGATGCAGAATAGGATCAAA  493

seq1  CCCAGGGAATGGTACAGCTTCTTTGGGGCAGAATCTTCCCATATCATTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGGAATGGTACAGCTTCTTTGGGGCAGAATCTTCCCATATCATTCA  543

seq1  ACGAAATGAACACAGCCCACGATGGATGTGCCGACAGGCCAACCTAATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAATGAACACAGCCCACGATGGATGTGCCGACAGGCCAACCTAATCT  593

seq1  AGTCAGTCCTTCCTTGAGATGTTCTTCCCTGATGGTTCTAAGTTGTATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGTCCTTCCTTGAGATGTTCTTCCCTGATGGTTCTAAGTTGTATTG  643

seq1  ACCTGACAATTAAAACTCGCCATGACAGTAACCAAATTTATTAATATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGACAATTAAAACTCGCCATGACAGTAACCAAATTTATTAATATTTT  693

seq1  CCTGTAGCATTTGGCATATGACTCTCAAGATCTTATTCCAAAATTTTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAGCATTTGGCATATGACTCTCAAGATCTTATTCCAAAATTTTAAA  743

seq1  TATTTCATGTAATTTTAAAATAAAATGTACGTAGGTAACTAGCAAAAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCATGTAATTTTAAAATAAAATGTACGTAGGTAACTAGCAAAAATG  793

seq1  TAGATATCCAGTTATCTCAGTCATCTGTTTTATCTTAATTGGAAATATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATCCAGTTATCTCAGTCATCTGTTTTATCTTAATTGGAAATATTA  843

seq1  CTTGTATGATACACTACGTATTCTCCTGTGTATCTTATTTTATTTGGGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATGATACACTACGTATTCTCCTGTGTATCTTATTTTATTTGGGGC  893

seq1  TCTGTAGTCTGTTTCATTCCTGAATTC  927
      |||||||||||||||||||||||||||
seq2  TCTGTAGTCTGTTTCATTCCTGAATTC  920