BAC Information

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BAC

Clone NameB6Ng01-148L07
Chromosome8 (Build37)
Map Location 6,790,776 - 6,936,351
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040360
Downstream geneEG665127, EG546032
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148L07.bB6Ng01-148L07.g
ACCDH945239DH945240
length1,1701,047
definitionDH945239|Mus musculus domesticus DNA, BAC clone: B6Ng01-148L07, 5' end.DH945240|Mus musculus domesticus DNA, BAC clone: B6Ng01-148L07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,790,776 - 6,791,956)(6,935,301 - 6,936,351)
sequence
gaattcaaggccttatactttctcagcaactactcttggcatatcccatt
tttccacactttccatgtcttattttaatgatgagaaaacatctcctact
tgctgcatccacatcaggaccaacttttgatatatagatcgacaaattgc
atctccataactcatgtacatctgggtctttgagaatattgacaaacata
aaacaaactaaaacagtctgcttaagtaatgtgaagaagggagccctgat
ctatgtttctaggcttacgtttcatctggattaaactatagtttaattat
taaaatccttagaaaacccatcctcaaagttatatacaccaaaagtaagg
agttgaagtaaggagatttccagcaggcagcttttccaaggaacttgagg
aatgaatgtagattttgtgagtcttcatgaggctgtggtaggcttttggg
tgaagcagctgctcctgaattacccactcttcttgcagtaattccagtga
attcttttgttcatttatctaggggtgaatgtatttacttcacttgttat
tgggaacctgcatgaggcatattgatatttgttcatatttcctcaggaaa
gacatttatcactatgttctttcatgatgagtttatactattcatcgggt
tgcatcgtacagtggtaagatcctcactatcgttatgatagatctatttt
ccttcacatttcatctcaaatacacacttctctcccttccgacgatgctt
agtctgaagggctaagcatatttttttgttgccaaataatgtgatgttag
gttttataaaagatgacactagggaagatcccagtgccatataaagagaa
aacaactaccatagattttatgttatctgctacacagaatacctgagata
tattacaagaacctcagaagttctccttttagcaatgctcatgtctcaca
ttggccatcattttgcatttttctccacaccagttgtttatgtgttgctg
atataaacagtctctgtcatgggatttgaatctaccttgagaaatattca
actcagctggattttttttaatgtctagtatcttataactgccctcatcg
ttatcctatagagccctgcacatacctcctattgtccaatatcatatttt
accctttctataaatttttt

gaattccagaaccttaggtcaaatcagatcccagcatgaagagggcaagt
cagcataaaggacctacctcgagctcaggagcaattggtaagttgatagt
tactgggagaaggaaaatcagtctctttatgggtgtgaacacttgtagtc
tgatcactctccaggaaggcaaaaacagtgtattcggggcacacactata
cataatgggttttaaataaaagaaaatacaagtttttatggctttggggg
gcttgtggtggataattaggatcaaaatgcattctatgaaattttgaatg
aactaattaatacaaagtgagaaaacaaacaaacaaacaaacaaacaaac
cctatctcagaaccaaggttcccttggccccatttactactgcaatgcca
gggtggtatctttgcagttatgtttagaaaacataaggctggtagaactg
attagcctctttaaaacatgtaactttttcattgtcatatgtataaataa
acacgcttctgcttgattttttttttttgttcagattgctttggtacatt
taaaggaacaaaatttcaatcttactgaattgaatattataatgacaatt
ttgtatttctctaatatgttggttttcaaccttcctaaaactaacatttc
aatagtatctcatgttgtgaccccaaaccataaaattattttcattgcta
ctcaataactgtagtttttgttatgaatcgtaatgtaaatatatttgctt
tccaatgctttaaaatgatacctgtagaagggtcaattaactcctaaggg
ggtcacaatccagaggttgagagtcactgttataatgtgaagccgccaaa
atatagttttaaaaaaagatgaaagagaaagaaaaacaagacacaaatat
taactggtggacatcgagcacattaaaaaccaaactgctccattcttcct
ctctcacaaagttaactggatgaccaggagtagaaaatcagagaacattt
taaaaatattttgtaaaataattttacaggatgcaatgtatcaaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_6790776_6791956
seq2: B6Ng01-148L07.b_48_1217

seq1  GAATTCAAGGCCTTATACTTTCTCAGCAACTACTCTTGGCATATCCCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCCTTATACTTTCTCAGCAACTACTCTTGGCATATCCCATT  50

seq1  TTTCCACACTTTCCATGTCTTATTTTAATGATGAGAAAACATCTCCTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCACACTTTCCATGTCTTATTTTAATGATGAGAAAACATCTCCTACT  100

seq1  TGCTGCATCCACATCAGGACCAACTTTTGATATATAGATCGACAAATTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCATCCACATCAGGACCAACTTTTGATATATAGATCGACAAATTGC  150

seq1  ATCTCCATAACTCATGTACATCTGGGTCTTTGAGAATATTGACAAACATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCATAACTCATGTACATCTGGGTCTTTGAGAATATTGACAAACATA  200

seq1  AAACAAACTAAAACAGTCTGCTTAAGTAATGTGAAGAAGGGAGCCCTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACTAAAACAGTCTGCTTAAGTAATGTGAAGAAGGGAGCCCTGAT  250

seq1  CTATGTTTCTAGGCTTACGTTTCATCTGGATTAAACTATAGTTTAATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTTTCTAGGCTTACGTTTCATCTGGATTAAACTATAGTTTAATTAT  300

seq1  TAAAATCCTTAGAAAACCCATCCTCAAAGTTATATACACCAAAAGTAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCCTTAGAAAACCCATCCTCAAAGTTATATACACCAAAAGTAAGG  350

seq1  AGTTGAAGTAAGGAGATTTCCAGCAGGCAGCTTTTCCAAGGAACTTGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAAGTAAGGAGATTTCCAGCAGGCAGCTTTTCCAAGGAACTTGAGG  400

seq1  AATGAATGTAGATTTTGTGAGTCTTCATGAGGCTGTGGTAGGCTTTTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATGTAGATTTTGTGAGTCTTCATGAGGCTGTGGTAGGCTTTTGGG  450

seq1  TGAAGCAGCTGCTCCTGAATTACCCACTCTTCTTGCAGTAATTCCAGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCAGCTGCTCCTGAATTACCCACTCTTCTTGCAGTAATTCCAGTGA  500

seq1  ATTCTTTTGTTCATTTATCTAGGGGTGAATGTATTTACTTCACTTGTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTTGTTCATTTATCTAGGGGTGAATGTATTTACTTCACTTGTTAT  550

seq1  TGGGAACCTGCATGAGGCATATTGATATTTGTTCATATTTCCTCAGGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAACCTGCATGAGGCATATTGATATTTGTTCATATTTCCTCAGGAAA  600

seq1  GACATTTATCACTATGTTCTTTCATGATGAGTTTATACTATTCATCGGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTATCACTATGTTCTTTCATGATGAGTTTATACTATTCATCGGGT  650

seq1  TGCATCGTACAGTGGTAAGATCCTCACTATCGTTATGATAGATCTATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCGTACAGTGGTAAGATCCTCACTATCGTTATGATAGATCTATTTT  700

seq1  CCTTCACATTTCATCTCAAATACACACTTCTCTCCCTTCCGACGATGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACATTTCATCTCAAATACACACTTCTCTCCCTTCCGACGATGCTT  750

seq1  AGTCTGAAGGGCTAAGCATATTTTTTTGTTGCCAAATAATGTGATGTTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGAAGGGCTAAGCATATTTTTTTGTTGCCAAATAATGTGATGTTAG  800

seq1  GTTTTATAAAAGATGACACTAGGGAAGATCCCAGTGCCATATAAAGAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATAAAAGATGACACTAGGGAAGATCCCAGTGCCATATAAAGAGAA  850

seq1  AACAACTACCATAGATTTTATGTTATCTGCTACACAGAATACCTGAGATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTACCATAGATTTTATGTTATCTGCTACACAGAATACCTGAGATA  900

seq1  TATTACAAGAACCTCAGAAGTTCTCCTTTTAGCAATGCTCATGTCTCACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACAAGAACCTCAGAAGTTCTCCTTTTAGCAATGCTCATGTCTCACA  950

seq1  TTGGCCATCATTTTGCATTTTTCTCCACACCAGTTGTTTATGTGTTGCTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCATCATTTTGCATTTTTCTCCACACCAGTTGTTTATGTGTTGCTG  1000

seq1  ATATAAACAGTCTCCTGTCATGGGATTTGAATCTTAACCTTGAG-AATAT  1049
      ||||||||||||| ||||||||||||||||||||  |||||||| |||||
seq2  ATATAAACAGTCT-CTGTCATGGGATTTGAATCT--ACCTTGAGAAATAT  1047

seq1  TCAGCTCAGCTGGATTTTTTTTTAATGTTCTAGTATTCTTTATACTGCCC  1099
      ||| |||||||||| |||||||||||| ||||||| ||||   |||||||
seq2  TCAACTCAGCTGGA-TTTTTTTTAATG-TCTAGTA-TCTTATAACTGCCC  1094

seq1  TCATCTGTATCCTATAGAGCCTTGCACCATACCTTCTATATGTCCCAATA  1149
      |||||  |||||||||||||| |||| ||||||| |||| ||| ||||||
seq2  TCATCGTTATCCTATAGAGCCCTGCA-CATACCTCCTAT-TGT-CCAATA  1141

seq1  TCATTATTTTACTCTTTTCTATTAAATTTTTT  1181
      ||| |||||||| | |||||| ||||||||||
seq2  TCA-TATTTTAC-CCTTTCTA-TAAATTTTTT  1170


seq1: chr8_6935301_6936351
seq2: B6Ng01-148L07.g_67_1113 (reverse)

seq1  AGTTTGATTAACACTGCATCCTGTAAAATTATTTTAACAAAATATTCTAA  50
      ||||||||  ||| ||||||||||||||||||||| |||||||||| | |
seq2  AGTTTGAT--ACATTGCATCCTGTAAAATTATTTT-ACAAAATATTTTTA  47

seq1  AAATGTTCTCTGATTTTTCTACTCCTGGTCATCCAGTTTACCTTTGTGAG  100
      ||||||||||||| |||||||||||||||||||||| ||| |||||||||
seq2  AAATGTTCTCTGA-TTTTCTACTCCTGGTCATCCAG-TTAACTTTGTGAG  95

seq1  AGAGGAAGAATGGAGCAGTTTGGTTTTTAATGTGCTCCGATGTCCA-CAG  149
      |||||||||||||||||||||||||||||||||||| ||||||||| |||
seq2  AGAGGAAGAATGGAGCAGTTTGGTTTTTAATGTGCT-CGATGTCCACCAG  144

seq1  TTAATATTTGTGTCTTGTTTTTCTTTCTCTTTCATCTTTTTTTAAACCTA  199
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTAATATTTGTGTCTTGTTTTTCTTTCTCTTTCATCTTTTTTTAAAACTA  194

seq1  TATTTTGGC-GCTTCACATTATAACAGTGACTCTCAACCTCTGGATTGTG  248
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGGCGGCTTCACATTATAACAGTGACTCTCAACCTCTGGATTGTG  244

seq1  ACCCCCTTAGGAGTTAATTGACCCTTCTACAGGTATCATTTTAAAGCATT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCTTAGGAGTTAATTGACCCTTCTACAGGTATCATTTTAAAGCATT  294

seq1  GGAAAGCAAATATATTTACATTACGATTCATAACAAAAACTACAGTTATT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGCAAATATATTTACATTACGATTCATAACAAAAACTACAGTTATT  344

seq1  GAGTAGCAATGAAAATAATTTTATGGTTTGGGGTCACAACATGAGATACT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGCAATGAAAATAATTTTATGGTTTGGGGTCACAACATGAGATACT  394

seq1  ATTGAAATGTTAGTTTTAGGAAGGTTGAAAACCAACATATTAGAGAAATA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAATGTTAGTTTTAGGAAGGTTGAAAACCAACATATTAGAGAAATA  444

seq1  CAAAATTGTCATTATAATATTCAATTCAGTAAGATTGAAATTTTGTTCCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTGTCATTATAATATTCAATTCAGTAAGATTGAAATTTTGTTCCT  494

seq1  TTAAATGTACCAAAGCAATCTGAACAAAAAAAAAAAATCAAGCAGAAGCG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGTACCAAAGCAATCTGAACAAAAAAAAAAAATCAAGCAGAAGCG  544

seq1  TGTTTATTTATACATATGACAATGAAAAAGTTACATGTTTTAAAGAGGCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATTTATACATATGACAATGAAAAAGTTACATGTTTTAAAGAGGCT  594

seq1  AATCAGTTCTACCAGCCTTATGTTTTCTAAACATAACTGCAAAGATACCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGTTCTACCAGCCTTATGTTTTCTAAACATAACTGCAAAGATACCA  644

seq1  CCCTGGCATTGCAGTAGTAAATGGGGCCAAGGGAACCTTGGTTCTGAGAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCATTGCAGTAGTAAATGGGGCCAAGGGAACCTTGGTTCTGAGAT  694

seq1  AGGGTTTGTTTGTTTGTTTGTTTGTTTGTTTTCTCACTTTGTATTAATTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTGTTTGTTTGTTTGTTTGTTTGTTTTCTCACTTTGTATTAATTA  744

seq1  GTTCATTCAAAATTTCATAGAATGCATTTTGATCCTAATTATCCACCACA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTCAAAATTTCATAGAATGCATTTTGATCCTAATTATCCACCACA  794

seq1  AGCCCCCCAAAGCCATAAAAACTTGTATTTTCTTTTATTTAAAACCCATT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCCCAAAGCCATAAAAACTTGTATTTTCTTTTATTTAAAACCCATT  844

seq1  ATGTATAGTGTGTGCCCCGAATACACTGTTTTTGCCTTCCTGGAGAGTGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATAGTGTGTGCCCCGAATACACTGTTTTTGCCTTCCTGGAGAGTGA  894

seq1  TCAGACTACAAGTGTTCACACCCATAAAGAGACTGATTTTCCTTCTCCCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACTACAAGTGTTCACACCCATAAAGAGACTGATTTTCCTTCTCCCA  944

seq1  GTAACTATCAACTTACCAATTGCTCCTGAGCTCGAGGTAGGTCCTTTATG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTATCAACTTACCAATTGCTCCTGAGCTCGAGGTAGGTCCTTTATG  994

seq1  CTGACTTGCCCTCTTCATGCTGGGATCTGATTTGACCTAAGGTTCTGGAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTTGCCCTCTTCATGCTGGGATCTGATTTGACCTAAGGTTCTGGAA  1044

seq1  TTC  1051
      |||
seq2  TTC  1047


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