BAC Information

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BAC

Clone NameB6Ng01-149C08
Chromosome8 (Build37)
Map Location 74,791,685 - 74,978,790
singlet/doubletdoublet
Overlap geneLOC384840, LOC100042405, Klf2, Eps15l1, Calr3, LOC100042421, 1700030K09Rik
Upstream gene2410004L22Rik, Myo9b, 2010315L10Rik, Ocel1, Nr2f6, Ushbp1, 5430437P03Rik, Ankrd41, Abhd8, Mrpl34, 1500034J01Rik, Tmem16h, Gtpbp3, Plvap, LOC665928, Bst2, 1110012M11Rik, BC033932, Txnl6, Slc27a1, Pgls, Bcnp1, Glt25d1, Unc13a, Jak3, Insl3, B3gnt3, LOC100042289, Fcho1, EG665991, LOC665996, LOC385024, LOC675190, Zfp709, LOC670453, Zfp617, BC049349, Cyp4f18, LOC666033, Olfr372, Olfr373, Olfr374, Tpm4, Rab8a, Hsh2d, Cib3, 2510049I19Rik, Ap1m1
Downstream geneCherp, Slc35e1, Crsp7, LOC100042439, 9130011J15Rik, Tmem38a, Nwd1, Sin3b, F2rl3, Large, LOC100039001, LOC666134
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149C08.bB6Ng01-149C08.g
ACCDH945563DH945564
length1,0611,124
definitionDH945563|Mus musculus domesticus DNA, BAC clone: B6Ng01-149C08, 5' end.DH945564|Mus musculus domesticus DNA, BAC clone: B6Ng01-149C08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,791,685 - 74,792,742)(74,977,663 - 74,978,790)
sequence
gaattctccaaaagtctgtcttggtcagtgagggcagaggggaaaaatca
gatttccagggggcgagagggctctgtgggtgcttgatgccaagtcttag
gaccaggacccacgtggtagaagaagagagatgactcccctgcgttgccc
tgtgacttctccatgtacaccgtggcataaggacatgcactcacacaaat
tttaaaagttaaaaaaaaaaaaaaactttaaagaatcagactttcagact
tagagctccatcttataacctccatttcctcctctgggaaatggggacag
tagaagcttgactctgagcattcccacatgtgtttctttagcctggtcac
cccttccaaacgatcttcctggtgaacttccgtgaaacttcacctgcagt
gaccctcctccagacacttttgtgtttcagggccggggacatctgtgtgc
ccctggacttggagccccttgatggacacagagggttggagagtggtgaa
agcagagacatccagggctcagcagtatggcacgggactccgaatacagt
gttctttcccaaaatctgtgtgcacgaaagtgcccagccacggtcatctg
ggccctgccccctccccatcctcacagcccctgccagggccaggacagcc
tgtcccctgagtgtcccccaggtcatagataaggctgccagtggctatcg
gcaggaaacatcttagcaagcaggaaaccacgaagtgagccaactgcgcc
cgcgccgagctcagcctatccttggcctgatatttttgggagccgctatt
taagcccgactcgactcctgccatgagctggactgttcttgtgaggttgg
agggagactccatttccacattcctcagaagcctgcggccagagatatga
ggatcggatcacagaggccctctagagagccacagcctttttcctctagc
cgcttgggcagcccgagcatgtggcgcacctctctgggccagttttcccc
ttcacagcttggattctggtcttaaatgaaaaaccagtaggaggccaggt
catgcctgaac
gaattcaagaccagcctcagctacatactgatttggaggcctgcctgggc
tgtgtgagaccctgtctcagaaaaccaaaagtaaaaataaagacagccaa
ggtgtaccagacttgtaatctcatcacttggaatgcagaggccagatgac
ttcatagtcttaggccaggtcaggctacagagtaagaccctgtccctctg
atcttcccaaagaaaataattaaaactatcctatctgtaggctagaaatg
tgactcagcaggtaaaggcactcactgccaagtccaacaacctgatctgg
acgacatgcagatgaaaactcccacagctatgctttgacctaacttatac
atgcacatgggtgtacacacacacacacacacacacacacacacaatgaa
aaactcttgtgtgtgtgaaatgagactgctcagcagttgagagcactatc
tgttcttacagaggaccgggattcaattaccagcaccgatgtggcagctc
acaactgtctgtgacttcaatttccatggatccagcacccttacaaagac
atacattcaggcaaagcacagatacacagaaaataaattaattaaaaaaa
aaacagaaaaagtatacaaagaaaacagttgaaaagtttgtaaagtacac
tttcattttaaagaaaacatgagtctgaagagtaagctcttaggtcaatg
tgctgccagcacccacaggagggggctcaaaattgtctgaaatccagctc
caggagattgcatgccctcttctggcttttgtgggcactgcactcacata
catgcatatacctccagaaacaacagaatcgtgcaacagggaaactccgt
gctatcagggaggtgtgcagctgtagatgaaacccaggggctggtgcatg
cttaggacatgctgtcttactttgctggagcctagtgccaggaaacatga
agcacttgacaaaaactttttcttgttctgtaggctgaagacaacaaggc
taaaccctgtctcaaacaacaaacaactaacaaccaaaagttgccacggt
gacttgtgttcctatatccatagaatcgtgaactgaacacctaaaagaga
cctctcatgctgcttaagctggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_74791685_74792742
seq2: B6Ng01-149C08.b_51_1111

seq1  GAATTCTCCAAAAGTCTGTCTTGGTCAGTGAGGGCAGAGGGGAAAAATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAAAAGTCTGTCTTGGTCAGTGAGGGCAGAGGGGAAAAATCA  50

seq1  GATTTCCAGGGGGCGAGAGGGCTCTGTGGGTGCTTGATGCCAAGTCTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCCAGGGGGCGAGAGGGCTCTGTGGGTGCTTGATGCCAAGTCTTAG  100

seq1  GACCAGGACCCACGTGGTAGAAGAAGAGAGATGACTCCCCTGCGTTGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGACCCACGTGGTAGAAGAAGAGAGATGACTCCCCTGCGTTGCCC  150

seq1  TGTGACTTCTCCATGTACACCGTGGCATAAGGACATGCACTCACACAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTTCTCCATGTACACCGTGGCATAAGGACATGCACTCACACAAAT  200

seq1  TTTAAAAGTTAAAAAAAAAAAAAAACTTTAAAGAATCAGACTTTCAGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAGTTAAAAAAAAAAAAAAACTTTAAAGAATCAGACTTTCAGACT  250

seq1  TAGAGCTCCATCTTATAACCTCCATTTCCTCCTCTGGGAAATGGGGACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCTCCATCTTATAACCTCCATTTCCTCCTCTGGGAAATGGGGACAG  300

seq1  TAGAAGCTTGACTCTGAGCATTCCCACATGTGTTTCTTTAGCCTGGTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGCTTGACTCTGAGCATTCCCACATGTGTTTCTTTAGCCTGGTCAC  350

seq1  CCCTTCCAAACGATCTTCCTGGTGAACTTCCGTGAAACTTCACCTGCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCAAACGATCTTCCTGGTGAACTTCCGTGAAACTTCACCTGCAGT  400

seq1  GACCCTCCTCCAGACACTTTTGTGTTTCAGGGCCGGGGACATCTGTGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTCCTCCAGACACTTTTGTGTTTCAGGGCCGGGGACATCTGTGTGC  450

seq1  CCCTGGACTTGGAGCCCCTTGATGGACACAGAGGGTTGGAGAGTGGTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGACTTGGAGCCCCTTGATGGACACAGAGGGTTGGAGAGTGGTGAA  500

seq1  AGCAGAGACATCCAGGGCTCAGCAGTATGGCACGGGACTCCGAATACAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGACATCCAGGGCTCAGCAGTATGGCACGGGACTCCGAATACAGT  550

seq1  GTTCTTTCCCAAAATCTGTGTGCACGAAAGTGCCCAGCCACGGTCATCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTCCCAAAATCTGTGTGCACGAAAGTGCCCAGCCACGGTCATCTG  600

seq1  GGCCCTGCCCCCTCCCCATCCTCACAGCCCCTGCCAGGGCCAGGACAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTGCCCCCTCCCCATCCTCACAGCCCCTGCCAGGGCCAGGACAGCC  650

seq1  TGTCCCCTGAGTGTCCCCCAGGTCATAGATAAGGCTGCCAGTGGCTATCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCCTGAGTGTCCCCCAGGTCATAGATAAGGCTGCCAGTGGCTATCG  700

seq1  GCAGGAAACATCTTAGCAAGCAGGAAACCACGAAGTGAGCCAACTGCGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAAACATCTTAGCAAGCAGGAAACCACGAAGTGAGCCAACTGCGCC  750

seq1  CGCGCCGAGCTCAGCCTATCCTTGGCCTGATA-TTTTGGGAGCCGCTATT  799
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CGCGCCGAGCTCAGCCTATCCTTGGCCTGATATTTTTGGGAGCCGCTATT  800

seq1  TAAGCCCGACTCGACTCCTGCCATGAGCTGGACTGTTCTTGTGAGGTTGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCCGACTCGACTCCTGCCATGAGCTGGACTGTTCTTGTGAGGTTGG  850

seq1  AGGGAGACTCCATTTCCACATCCCTCAGAAGCCTGCGGCCAGAGATATGA  899
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGGGAGACTCCATTTCCACATTCCTCAGAAGCCTGCGGCCAGAGATATGA  900

seq1  GGATCGGATCACAGAGGCCCTCTAGAGAGCCACAGCCTCTT--CTCTAGC  947
      |||||||||||||||||||||||||||||||||||||| ||  |||||||
seq2  GGATCGGATCACAGAGGCCCTCTAGAGAGCCACAGCCTTTTTCCTCTAGC  950

seq1  CGC-TGGGCAGCCCGAGCATGTGGCGTCACCTCTCTGGGCCAGTTTTCCC  996
      ||| |||||||||||||||||||||| |||||||||||||||||||||||
seq2  CGCTTGGGCAGCCCGAGCATGTGGCG-CACCTCTCTGGGCCAGTTTTCCC  999

seq1  CTTCACAGCTTGGATTCT-GTCCTAAATGAAAAACCAAGTAGGAGGCCAG  1045
      |||||||||||||||||| ||| ||||||||||||| |||||||||||||
seq2  CTTCACAGCTTGGATTCTGGTCTTAAATGAAAAACC-AGTAGGAGGCCAG  1048

seq1  GTCATGCCTGAAC  1058
      |||||||||||||
seq2  GTCATGCCTGAAC  1061

seq1: chr8_74977663_74978790
seq2: B6Ng01-149C08.g_68_1191 (reverse)

seq1  TTCCAGCTTAAAGCCAGCATGAGATGTCTCTTTTAGGTTGTTTCAG-TCA  49
      |||||||||||   |||||||||| |||||||||||||   ||||| |||
seq2  TTCCAGCTTAA--GCAGCATGAGAGGTCTCTTTTAGGT--GTTCAGTTCA  46

seq1  CGGTTCTATGGCTATGAGGAGCAC-AGTCACCGTGGCAACTTTTTGTTTG  98
      || |||||||| ||| |||| ||| ||||||||||||||| ||||| |||
seq2  CGATTCTATGGATAT-AGGAACACAAGTCACCGTGGCAAC-TTTTGGTTG  94

seq1  TTTGTTTGTTTGTTTGTTTGAGACAGGGTTTAGCCTTGTTGTCTTCAGCC  148
      || | ||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTAG-TTGTTTG-TTGTTTGAGACAGGGTTTAGCCTTGTTGTCTTCAGCC  142

seq1  TACAGAACAAG-AAAAGTTTGTGTCAAGTGCTTCATGGTTCCTGGCACTA  197
      ||||||||||| |||||||| |||||||||||||||| ||||||||||||
seq2  TACAGAACAAGAAAAAGTTTTTGTCAAGTGCTTCATGTTTCCTGGCACTA  192

seq1  GGCTTCAGCAAAGTAGGACAGCATGTCCTAAGCATGCA-CAGGCCCTGGG  246
      |||| |||||||||| |||||||||||||||||||||| ||| |||||||
seq2  GGCTCCAGCAAAGTAAGACAGCATGTCCTAAGCATGCACCAGCCCCTGGG  242

seq1  TTTCATCTACAGCTGCACACCTCCCTGATAGCACGGAGTTTCCCTGTTTG  296
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTTCATCTACAGCTGCACACCTCCCTGATAGCACGGAGTTTCCCTG-TTG  291

seq1  CACGATTCTGTTGTTTCTGGAGGTATATGCATGTATGTGAGTGCAGTGCC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGATTCTGTTGTTTCTGGAGGTATATGCATGTATGTGAGTGCAGTGCC  341

seq1  CACAAAAGCCAGAAGAGGGCATGCAATCTCCTGGAGCTGGATTTCAGACA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAAGCCAGAAGAGGGCATGCAATCTCCTGGAGCTGGATTTCAGACA  391

seq1  ATTTTGAGCCCCCTCCTGTGGGTGCTGGCAGCACATTGACCTAAGAGCTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAGCCCCCTCCTGTGGGTGCTGGCAGCACATTGACCTAAGAGCTT  441

seq1  ACTCTTCAGACTCATGTTTTCTTT-AAATGAAAGTGTACTTTACAAACTT  495
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ACTCTTCAGACTCATGTTTTCTTTAAAATGAAAGTGTACTTTACAAACTT  491

seq1  TTCAACTGTTTTCTTTGTATACTTTTTCTGTTTTTTTTTTAATTAATTTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTGTTTTCTTTGTATACTTTTTCTGTTTTTTTTTTAATTAATTTA  541

seq1  TTTTCTGTGTATCTGTGCTTTGCCTGAATGTATGTCTTTGTAAGGGTGCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTGTATCTGTGCTTTGCCTGAATGTATGTCTTTGTAAGGGTGCT  591

seq1  GGATCCATGGAAATTGAAGTCACAGACAGTTGTGAGCTGCCACATCGGTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCATGGAAATTGAAGTCACAGACAGTTGTGAGCTGCCACATCGGTG  641

seq1  CTGGTAATTGAATCCCGGTCCTCTGTAAGAACAGATAGTGCTCTCAACTG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAATTGAATCCCGGTCCTCTGTAAGAACAGATAGTGCTCTCAACTG  691

seq1  CTGAGCAGTCTCATTTCACACACACAAGAGTTTTTCATTGTGTGTGTGTG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCAGTCTCATTTCACACACACAAGAGTTTTTCATTGTGTGTGTGTG  741

seq1  TGTGTGTGTGTGTGTGTGTACACCCATGTGCATGTATAAGTTAGGTCAAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTACACCCATGTGCATGTATAAGTTAGGTCAAA  791

seq1  GCATAGCTGTGGGAGTTTTCATCTGCATGTCGTCCAGATCAGGTTGTTGG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGCTGTGGGAGTTTTCATCTGCATGTCGTCCAGATCAGGTTGTTGG  841

seq1  ACTTGGCAGTGAGTGCCTTTACCTGCTGAGTCACATTTCTAGCCTACAGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGCAGTGAGTGCCTTTACCTGCTGAGTCACATTTCTAGCCTACAGA  891

seq1  TAGGATAGTTTTAATTATTTTCTTTGGGAAGATCAGAGGGACAGGGTCTT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATAGTTTTAATTATTTTCTTTGGGAAGATCAGAGGGACAGGGTCTT  941

seq1  ACTCTGTAGCCTGACCTGGCCTAAGACTATGAAGTCATCTGGCCTCTGCA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTAGCCTGACCTGGCCTAAGACTATGAAGTCATCTGGCCTCTGCA  991

seq1  TTCCAAGTGATGAGATTACAAGTCTGGTACACCTTGGCTGTCTTTATTTT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGTGATGAGATTACAAGTCTGGTACACCTTGGCTGTCTTTATTTT  1041

seq1  TACTTTTGGTTTTCTGAGACAGGGTCTCACACAGCCCAGGCAGGCCTCCA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTGGTTTTCTGAGACAGGGTCTCACACAGCCCAGGCAGGCCTCCA  1091

seq1  AATCAGTATGTAGCTGAGGCTGGTCTTGAATTC  1128
      |||||||||||||||||||||||||||||||||
seq2  AATCAGTATGTAGCTGAGGCTGGTCTTGAATTC  1124