BAC Information

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BAC

Clone NameB6Ng01-149I03
Chromosome8 (Build37)
Map Location 23,483,015 - 23,618,167
singlet/doubletdoublet
Overlap geneSlc25a15, LOC547006, Mrps31, AI316807, Slc20a2
Upstream geneLOC100040668, LOC100041843, LOC100040678, EG665927, LOC100040693, Defcr20, LOC100041890, LOC100041895, EG626682, LOC100040706, EG665956, LOC635093, Defcr26, Defcr17, LOC100041952, Defcr-ps1, AY761184, LOC100040729, Defcr24, LOC100040739, Defb1, Defb50, Defb2, Defb10, Defb9, Defb11, Defb15, Defb35, Defb13, C86695, Ccdc70, Atp7b, Alg11, Nek5, Nek3, Ckap2, Vps36, Rpl30-ps2, Thsd1, Tpte
Downstream geneLOC100040803, Vdac3, Dkk4, Polb, Ikbkb, Plat, Ap3m2, Myst3, LOC100042253, Ank1, Nkx6-3, Agpat6, Gins4, Golga7, Sfrp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149I03.bB6Ng01-149I03.g
ACCDH945829DH945830
length1,1221,159
definitionDH945829|Mus musculus domesticus DNA, BAC clone: B6Ng01-149I03, 5' end.DH945830|Mus musculus domesticus DNA, BAC clone: B6Ng01-149I03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,617,048 - 23,618,167)(23,483,015 - 23,484,192)
sequence
gaattcagttctattttcaattcttacatatttttcctactgaatgcacc
actgaaatttttctctcattgttgacaccgtatgtcatttgtatttaaaa
atcaggcaactcataacctcaaagaagtctttacatacagtttggcaaaa
tggggacatggcattcacgacactaatcccgggtttgtctctgtctttgc
ttgtagatggagaaatgggcacacaactgtttcattaaacatcaacattc
ctaaagcggtgtactttacacggtaactgacaagggggtttctttctggt
tctgatataaacaagttgcttaacttgaaattgttctactttaagtgtaa
acgtagttcaaactaagcaaggtgacgggtttaatttaaagtaatactga
aagtaacactgaaattccgtttgcttcagtctagatataagttgggactg
accaaactgaaaggcagttaggtgctttagatacagtggataactaactc
agtcaaccggaacaccctttaagtcaccctctgaaaccttccttataaag
tttttttctttaggagaataaaggtctattttctaagtataaacttttcc
ttttaaaagatgcttccatgtataggcttagcaaggtaacacttgctagc
ctcttgtgtctgcagtgtatccacttaagaagggtattaactttttacat
gtttcccccaacagttactaccccagaaaataaagttagagacacactgt
aaccatttctactaatctaacattttaacatgcaaaagaagaactaagct
acattttttaagataaaaataaaagttaagaatcaaatactttctgcagg
aaaatctgaatactcttgagacactcgccgccctgcacatgtaaagaaaa
cactataccaccattcctgacacggccgggttgtagatcaacaccaagtt
tcccaaggcgattaaaattaccacgatatcacttaagaagatttaaggta
tgaaggacaaagaaaagtctaaaatttcccagaagtactgccaagtagtt
cgaaaggaatctgaaccgcagctctcagatgtctgcctctccggaccatg
aaaacaaacctgaagtctgaat
gaattcatctggaaatgaacggtagcaactagtaaggctctctgtggtca
catcaacgaaaccatctaagaactgtcaataaatgagtctatcattatgc
aaagaccatagagtgactctccacaaagcaatgacagctacagaacaata
taaacctacaaggaccatatatatgctgccctcattggtagaaataacac
tatgcaaggcatggctgtgtaaggcctgaaacaccctgcattctgtagaa
atagctctaaagacaatagtttgtgaaaatgaaaggggtttggggcagat
tactgcaaccaagcaactctgcatggtcagtacacgttagttagacttgg
acactgggttagcagctcagaagtctggaagatgaaactgtatattttgt
tttgaagggaaaagaagataaataagggctgtggttgccttggaagtgac
tgaagctctgcgtctccctgggaatgggaaagcagcagtcagtctgagag
aactgtcagaagtttttgtcacctttcttgccatcctctaaacatcccca
caggtcctggtcctgtcctcccccaaggaaaaacactttccacattattg
ttactatctcccataattccagttatggaaacatgcgctagggcaggaca
ggctgcacactacttcctgtgatgtgcaagcagcacaatccacgggcaga
ttccacagcgggttagccttgtagcttgtcatactggcaacaaggacaga
ttgcagcgtggcaatggtggtacacctttaatcccagcactcaggaggca
gaggcaggcagattttgtatgagttcggggacatcctggtctacacagtg
agttctaaagtcagccagggctaaccacatagacccagtctcaaaaagtc
aacccaacaaacaaaagtgttctttgaaaagaggttcatgttgaggtttc
gctctcacattccagattcatcaatctctacagttaaagtgtcatgttat
tccagttttgttcaatagaacttgtttagccgtttgctggtttgctgtcc
taaccccaaggatgagttcttagacaactgaataactcatcctcaagacg
gctgattgatgcttcttgctctagacagaattaccaacctggcaggaatt
atctcaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_23617048_23618167
seq2: B6Ng01-149I03.b_43_1163 (reverse)

seq1  TTCAGACTTCAGG-TTGTGTTCATGGTCCGGAGA-GCAGACATCTGGAGA  48
      ||||||||||||| |||| ||||||||||||||| |||||||||| ||||
seq2  TTCAGACTTCAGGTTTGTTTTCATGGTCCGGAGAGGCAGACATCT-GAGA  49

seq1  GCTGCGGTTCAGATTTCTTTTCGAACTACTTGTGAGTAC-TCTGGGAATT  97
      ||||||||||||| ||| ||||||||||||||  ||||| |||||||| |
seq2  GCTGCGGTTCAGA-TTCCTTTCGAACTACTTGGCAGTACTTCTGGGAAAT  98

seq1  TTTAAGACTTTTCTTTGTTCTTCATACCTTAAATCTTCCTAAAGTGACTA  147
      ||| |||||||||||||| |||||||||||||||||| || |||||| ||
seq2  TTT-AGACTTTTCTTTGTCCTTCATACCTTAAATCTT-CTTAAGTGA-TA  145

seq1  TCGTGGTAATTTTATCTGCCTTGGGAAAACTGGTGTTGATCTACAACCCG  197
      ||||||||||||||   |||||||||||  ||||||||||||||||||||
seq2  TCGTGGTAATTTTAATCGCCTTGGGAAACTTGGTGTTGATCTACAACCCG  195

seq1  GCCGTGTCA-GAATGGTGGTATAGTGTTTTCTTTACATGTGCAGGGCGGC  246
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTGTCAGGAATGGTGGTATAGTGTTTTCTTTACATGTGCAGGGCGGC  245

seq1  GAGTGTCTC-AGAGTATTCAGATTTTCCTGCAGAAAGTATTTGATTCTTA  295
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTCTCAAGAGTATTCAGATTTTCCTGCAGAAAGTATTTGATTCTTA  295

seq1  ACTTTTATTTTTATCTT-AAAAATGTAGCTTAGTTCTTCTTTTGCATGTT  344
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACTTTTATTTTTATCTTAAAAAATGTAGCTTAGTTCTTCTTTTGCATGTT  345

seq1  AAAATGTTAGATTAGTAGAAATGGTTACAGTGTGTCTCTAACTTTATTTT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTTAGATTAGTAGAAATGGTTACAGTGTGTCTCTAACTTTATTTT  395

seq1  CTGGGGTAGTAACTGTTGGGGGAAACATGTAAAAAGTTAATACCCTTCTT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGTAGTAACTGTTGGGGGAAACATGTAAAAAGTTAATACCCTTCTT  445

seq1  AAGTGGATACACTGCAGACACAAGAGGCTAGCAAGTGTTACCTTGCTAAG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGATACACTGCAGACACAAGAGGCTAGCAAGTGTTACCTTGCTAAG  495

seq1  CCTATACATGGAAGCATCTTTTAAAAGGAAAAGTTTATACTTAGAAAATA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATACATGGAAGCATCTTTTAAAAGGAAAAGTTTATACTTAGAAAATA  545

seq1  GACCTTTATTCTCCTAAAGAAAAAAACTTTATAAGGAAGGTTTCAGAGGG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTTATTCTCCTAAAGAAAAAAACTTTATAAGGAAGGTTTCAGAGGG  595

seq1  TGACTTAAAGGGTGTTCCGGTTGACTGAGTTAGTTATCCACTGTATCTAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTAAAGGGTGTTCCGGTTGACTGAGTTAGTTATCCACTGTATCTAA  645

seq1  AGCACCTAACTGCCTTTCAGTTTGGTCAGTCCCAACTTATATCTAGACTG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCTAACTGCCTTTCAGTTTGGTCAGTCCCAACTTATATCTAGACTG  695

seq1  AAGCAAACGGAATTTCAGTGTTACTTTCAGTATTACTTTAAATTAAACCC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAACGGAATTTCAGTGTTACTTTCAGTATTACTTTAAATTAAACCC  745

seq1  GTCACCTTGCTTAGTTTGAACTACGTTTACACTTAAAGTAGAACAATTTC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCTTGCTTAGTTTGAACTACGTTTACACTTAAAGTAGAACAATTTC  795

seq1  AAGTTAAGCAACTTGTTTATATCAGAACCAGAAAGAAACCCCCTTGTCAG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAAGCAACTTGTTTATATCAGAACCAGAAAGAAACCCCCTTGTCAG  845

seq1  TTACCGTGTAAAGTACACCGCTTTAGGAATGTTGATGTTTAATGAAACAG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCGTGTAAAGTACACCGCTTTAGGAATGTTGATGTTTAATGAAACAG  895

seq1  TTGTGTGCCCATTTCTCCATCTACAAGCAAAGACAGAGACAAACCCGGGA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGCCCATTTCTCCATCTACAAGCAAAGACAGAGACAAACCCGGGA  945

seq1  TTAGTGTCGTGAATGCCATGTCCCCATTTTGCCAAACTGTATGTAAAGAC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTCGTGAATGCCATGTCCCCATTTTGCCAAACTGTATGTAAAGAC  995

seq1  TTCTTTGAGGTTATGAGTTGCCTGATTTTTAAATACAAATGACATACGGT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGAGGTTATGAGTTGCCTGATTTTTAAATACAAATGACATACGGT  1045

seq1  GTCAACAATGAGAGAAAAATTTCAGTGGTGCATTCAGTAGGAAAAATATG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACAATGAGAGAAAAATTTCAGTGGTGCATTCAGTAGGAAAAATATG  1095

seq1  TAAGAATTGAAAATAGAACTGAATTC  1120
      ||||||||||||||||||||||||||
seq2  TAAGAATTGAAAATAGAACTGAATTC  1121

seq1: chr8_23483015_23484192
seq2: B6Ng01-149I03.g_68_1226

seq1  GAATTCATCTGGAAATGAACGGTAGCAACTAGTAAGGCTCTCTGTGGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTGGAAATGAACGGTAGCAACTAGTAAGGCTCTCTGTGGTCA  50

seq1  CATCAACGAAACCATCTAAGAACTGTCAATAAATGAGTCTATCATTATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAACGAAACCATCTAAGAACTGTCAATAAATGAGTCTATCATTATGC  100

seq1  AAAGACCATAGAGTGACTCTCCACAAAGCAATGACAGCTACAGAACAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACCATAGAGTGACTCTCCACAAAGCAATGACAGCTACAGAACAATA  150

seq1  TAAACCTACAAGGACCATATATATGCTGCCCTCATTGGTAGAAATAACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTACAAGGACCATATATATGCTGCCCTCATTGGTAGAAATAACAC  200

seq1  TATGCAAGGCATGGCTGTGTAAGGCCTGAAACACCCTGCATTCTGTAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAAGGCATGGCTGTGTAAGGCCTGAAACACCCTGCATTCTGTAGAA  250

seq1  ATAGCTCTAAAGACAATAGTTTGTGAAAATGAAAGGGGTTTGGGGCAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTCTAAAGACAATAGTTTGTGAAAATGAAAGGGGTTTGGGGCAGAT  300

seq1  TACTGCAACCAAGCAACTCTGCATGGTCAGTACACGTTAGTTAGACTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCAACCAAGCAACTCTGCATGGTCAGTACACGTTAGTTAGACTTGG  350

seq1  ACACTGGGTTAGCAGCTCAGAAGTCTGGAAGATGAAACTGTATATTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGGGTTAGCAGCTCAGAAGTCTGGAAGATGAAACTGTATATTTTGT  400

seq1  TTTGAAGGGAAAAGAAGATAAATAAGGGCTGTGGTTGCCTTGGAAGTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGGGAAAAGAAGATAAATAAGGGCTGTGGTTGCCTTGGAAGTGAC  450

seq1  TGAAGCTCTGCGTCTCCCTGGGAATGGGAAAGCAGCAGTCAGTCTGAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTCTGCGTCTCCCTGGGAATGGGAAAGCAGCAGTCAGTCTGAGAG  500

seq1  AACTGTCAGAAGTTTTTGTCACCTTTCTTGCCATCCTCTAAACATCCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTCAGAAGTTTTTGTCACCTTTCTTGCCATCCTCTAAACATCCCCA  550

seq1  CAGGTCCTGGTCCTGTCCTCCCCCAAGGAAAAACACTTTCCACATTATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCCTGGTCCTGTCCTCCCCCAAGGAAAAACACTTTCCACATTATTG  600

seq1  TTACTATCTCCCATAATTCCAGTTATGGAAACATGCGCTAGGGCAGGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTATCTCCCATAATTCCAGTTATGGAAACATGCGCTAGGGCAGGACA  650

seq1  GGCTGCACACTACTTCCTGTGATGTGCAAGCAGCACAATCCACGGGCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCACACTACTTCCTGTGATGTGCAAGCAGCACAATCCACGGGCAGA  700

seq1  TTCCACAGCGGGTTAGCCTTGTAGCTTGTCATACTGGCAACAAGGACAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACAGCGGGTTAGCCTTGTAGCTTGTCATACTGGCAACAAGGACAGA  750

seq1  TTGCAGCGTGGCAATGGTGGTACACCTTTAATCCCAGCACTCAGGAGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGCGTGGCAATGGTGGTACACCTTTAATCCCAGCACTCAGGAGGCA  800

seq1  GAGGCAGGCAGATTTTGTATGAGTTCGGGGACATCCTGGTCTACACAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGGCAGATTTTGTATGAGTTCGGGGACATCCTGGTCTACACAGTG  850

seq1  AGTTCTAAGGTCAGCCAGGGCTACACACATAGACCCAGTCTCAAAAAGTC  900
      |||||||| ||||||||||||||  |||||||||||||||||||||||||
seq2  AGTTCTAAAGTCAGCCAGGGCTAACCACATAGACCCAGTCTCAAAAAGTC  900

seq1  AACCCAACAAACAAAAGTGTTCTTTGAAAAGAGGTTCATGTTGAGGTTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAACAAACAAAAGTGTTCTTTGAAAAGAGGTTCATGTTGAGGTTTC  950

seq1  GCTCTCACCATTCCAGATTCATCAAAATCTCTAACAGTTAAAGGTGTCCA  1000
      ||||||| |||||||||||||||  ||||||| ||||||||| |||| ||
seq2  GCTCTCA-CATTCCAGATTCATC--AATCTCT-ACAGTTAAA-GTGT-CA  994

seq1  TGTTATTCCAGTTTTGTTCACATTAAGAAACTTGTTTAGGCCGTTTGCTG  1050
      |||||||||||||||||||| ||  || |||||||||| |||||||||||
seq2  TGTTATTCCAGTTTTGTTCA-AT--AG-AACTTGTTTA-GCCGTTTGCTG  1039

seq1  TTTTGCTGTCCTAGACACCCAAGTGATGAGTTCTTAGAACAAACTGAGAA  1100
       |||||||||||| || |||||| ||||||||||||||   ||||||  |
seq2  GTTTGCTGTCCTA-AC-CCCAAG-GATGAGTTCTTAGA--CAACTGAATA  1084

seq1  ACTCATCTCACAAGACAGCTGAGTGATGCTACATGTCCTAGACAGAATTT  1150
      ||||||| | |||||| ||||| ||||||| | ||  |||||||||| ||
seq2  ACTCATC-CTCAAGACGGCTGATTGATGCTTCTTGCTCTAGACAGAA-TT  1132

seq1  ACCAACCTGGCATGGAATTAGCTCAACT  1178
      |||||||||||| ||||||| |||||||
seq2  ACCAACCTGGCA-GGAATTATCTCAACT  1159