BAC Information

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BAC

Clone NameB6Ng01-150J10
Chromosome8 (Build37)
Map Location 115,693,389 - 115,869,790
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042040, Cntnap4, LOC100042061
Downstream geneMon1b, 4930481F22Rik, Adamts18, Nudt7, AI427515
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150J10.bB6Ng01-150J10.g
ACCDH946631DH946632
length1,157255
definitionDH946631|Mus musculus domesticus DNA, BAC clone: B6Ng01-150J10, 5' end.DH946632|Mus musculus domesticus DNA, BAC clone: B6Ng01-150J10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,693,389 - 115,694,544)(115,869,536 - 115,869,790)
sequence
gaattctcaaatacttgacataatcacccccacatatgatgatttatttc
tgaatcaggcgctatttatctggaaatggactcatctccagcatgtctcc
ccatttaattaatttcctgaagatgagactttatggcgttatcattatag
atgcggtgaaaatgctttctgttaaattagaaaaagtcaaaacgcaaagc
ttaattagcagaatatatttaccagtaagaaataattaaatatgcattaa
tcaattaaaataaattcagcagcattctgctcttttcagagtcgtctcca
ttctcttctattccattaacacatcctcctgtctaccctttgttttattc
accatgagcctctgcttttggcttcctgcccacttactctccctgacttt
tgttaatttcttccattcttatgacctcctcatgctggttcatttaaggt
tttgggatcagtcttcctcttattccatatattcccacggagaacttatc
cagccatgactctcaatgtcatctttatgtttaccatctccttacaatgg
ggtattcttaccttcaacttcacacaagtcttcatcttctcaccacaggg
tgtctcaagtttcaaccccagtcataccatgattctctccatggacaatg
gagagggctatgaagtgggctcctttcaccaaacttaggaagttatctac
aacctattgttctaattatagcatttatataatttgcatctggttctttc
aatattgcactatgcctttgagatccgtccacactgcagcatgcaccagt
ggttgcttcctttttgttgctaataaggatttcattgaataagttggtac
tgtttacctgttcattcacttgataagtgtttagattcttctatttgggg
gctatgaaaaatgatgttaccatagatgtttgcattcaagttattgtgta
gaagtaacttttccttttactggggtatattcatctatgtagcattcctc
aattacatactaaatacacacttaattttgtgtgtgtgttgggtgtattg
tgctcaccatagttaatgtgcttgttaacttatagcatacatgtgaatca
gaggtcaagctttgaaggaggtgtggttcctcagacatagtatctatttc
atacacg
caaagatgggcgcctttttaccatttctttaagaaaatagtaattggtct
ctattttatagagactctaagtcttctccaggagtcaaagtggaataaag
atacttccacataagagaagaaagctaagtgatggtttaacacaacaagg
ggcatcaaagttcaaggtaaggggatatgacaagtggaagaaatgaaata
tatcaaggtggtggctgtgtgtgtgtgtgcatgtgtgtgtattggggtgg
ggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_115693389_115694544
seq2: B6Ng01-150J10.b_46_1202

seq1  GAATTCTCAAATACTTGACATAATCACCCCCACATATGATGATTTATTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAATACTTGACATAATCACCCCCACATATGATGATTTATTTC  50

seq1  TGAATCAGGCGCTATTTATCTGGAAATGGACTCATCTCCAGCATGTCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCAGGCGCTATTTATCTGGAAATGGACTCATCTCCAGCATGTCTCC  100

seq1  CCATTTAATTAATTTCCTGAAGATGAGACTTTATGGCGTTATCATTATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTAATTAATTTCCTGAAGATGAGACTTTATGGCGTTATCATTATAG  150

seq1  ATGCGGTGAAAATGCTTTCTGTTAAATTAGAAAAAGTCAAAACGCAAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGGTGAAAATGCTTTCTGTTAAATTAGAAAAAGTCAAAACGCAAAGC  200

seq1  TTAATTAGCAGAATATATTTACCAGTAAGAAATAATTAAATATGCATTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTAGCAGAATATATTTACCAGTAAGAAATAATTAAATATGCATTAA  250

seq1  TCAATTAAAATAAATTCAGCAGCATTCTGCTCTTTTCAGAGTCGTCTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTAAAATAAATTCAGCAGCATTCTGCTCTTTTCAGAGTCGTCTCCA  300

seq1  TTCTCTTCTATTCCATTAACACATCCTCCTGTCTACCCTTTGTTTTATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTCTATTCCATTAACACATCCTCCTGTCTACCCTTTGTTTTATTC  350

seq1  ACCATGAGCCTCTGCTTTTGGCTTCCTGCCCACTTACTCTCCCTGACTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGAGCCTCTGCTTTTGGCTTCCTGCCCACTTACTCTCCCTGACTTT  400

seq1  TGTTAATTTCTTCCATTCTTATGACCTCCTCATGCTGGTTCATTTAAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATTTCTTCCATTCTTATGACCTCCTCATGCTGGTTCATTTAAGGT  450

seq1  TTTGGGATCAGTCTTCCTCTTATTCCATATATTCCCACGGAGAACTTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGATCAGTCTTCCTCTTATTCCATATATTCCCACGGAGAACTTATC  500

seq1  CAGCCATGACTCTCAATGTCATCTTTATGTTTACCATCTCCTTACAATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATGACTCTCAATGTCATCTTTATGTTTACCATCTCCTTACAATGG  550

seq1  GGTATTCTTACCTTCAACTTCACACAAGTCTTCATCTTCTCACCACAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTCTTACCTTCAACTTCACACAAGTCTTCATCTTCTCACCACAGGG  600

seq1  TGTCTCAAGTTTCAACCCCAGTCATACCATGATTCTCTCCATGGACAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAAGTTTCAACCCCAGTCATACCATGATTCTCTCCATGGACAATG  650

seq1  GAGAGGGCTATGAAGTGGGCTCCTTTCACCAAACTTAGGAAGTTATCTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGCTATGAAGTGGGCTCCTTTCACCAAACTTAGGAAGTTATCTAC  700

seq1  AACCTATTGTTCTAATTATAGCATTTATATAATTTGCATCTGGTTCTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTATTGTTCTAATTATAGCATTTATATAATTTGCATCTGGTTCTTTC  750

seq1  AATATTGCACTATGCCTTTGAGATCCGTCCACACTGCAGCATGCACCAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGCACTATGCCTTTGAGATCCGTCCACACTGCAGCATGCACCAGT  800

seq1  GGTTGCTTCCTTTTTGTTGCTAATAAGGATTTCATTGAATAAGTTGGTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCTTCCTTTTTGTTGCTAATAAGGATTTCATTGAATAAGTTGGTAC  850

seq1  TGTTTACCTGTTCATTCACTTGATAAGTGTTTAGATTCTTCTATTTGGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACCTGTTCATTCACTTGATAAGTGTTTAGATTCTTCTATTTGGGG  900

seq1  GCTATGAAAAATGATGTTACCATAGATGTTTGCATTCAAGTTATTGTGTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGAAAAATGATGTTACCATAGATGTTTGCATTCAAGTTATTGTGTA  950

seq1  GAAGTAACTTTTCCTTTTACTGGGGTATATTCATCTATGTAGCATTCCTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAACTTTTCCTTTTACTGGGGTATATTCATCTATGTAGCATTCCTC  1000

seq1  AATTACATACTAAATACACACTTAATTTTGTGTGTGTTGTTGGGGTGTA-  1049
      |||||||||||||||||||||||||||||||||||| |||| ||||||| 
seq2  AATTACATACTAAATACACACTTAATTTTGTGTGTG-TGTT-GGGTGTAT  1048

seq1  TGTGCTCA-CATAGGTTTATGTGCTTG-TAAC-TATAGGCATACATGTGG  1096
      |||||||| |||| ||| ||||||||| |||| |||| ||||||||||| 
seq2  TGTGCTCACCATA-GTTAATGTGCTTGTTAACTTATA-GCATACATGTGA  1096

seq1  ATTCCAGAGGTC-AGCTTTG-AGGA-GTGTTGTTCCTCAAGCATAGTATC  1143
      ||  |||||||| ||||||| |||| |||| ||||||||  |||||||||
seq2  AT--CAGAGGTCAAGCTTTGAAGGAGGTGTGGTTCCTCAGACATAGTATC  1144

seq1  TTTTTCATACACG  1156
      | |||||||||||
seq2  TATTTCATACACG  1157

seq1: chr8_115869536_115869790
seq2: B6Ng01-150J10.g_71_325 (reverse)

seq1  CCACCCCACCCCAATACACACACATGCACACACACACACAGCCACCACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCACCCCAATACACACACATGCACACACACACACAGCCACCACCT  50

seq1  TGATATATTTCATTTCTTCCACTTGTCATATCCCCTTACCTTGAACTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATATTTCATTTCTTCCACTTGTCATATCCCCTTACCTTGAACTTTG  100

seq1  ATGCCCCTTGTTGTGTTAAACCATCACTTAGCTTTCTTCTCTTATGTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCCTTGTTGTGTTAAACCATCACTTAGCTTTCTTCTCTTATGTGGA  150

seq1  AGTATCTTTATTCCACTTTGACTCCTGGAGAAGACTTAGAGTCTCTATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTTTATTCCACTTTGACTCCTGGAGAAGACTTAGAGTCTCTATAA  200

seq1  AATAGAGACCAATTACTATTTTCTTAAAGAAATGGTAAAAAGGCGCCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAGACCAATTACTATTTTCTTAAAGAAATGGTAAAAAGGCGCCCAT  250

seq1  CTTTG  255
      |||||
seq2  CTTTG  255