BAC Information

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BAC

Clone NameB6Ng01-151A11
Chromosome8 (Build37)
Map Location 38,789,115 - 38,789,966
singlet/doubletsinglet
Overlap geneSgcz
Upstream geneA730069N07Rik, AI429214, LOC666877, LOC100041616, 1700016D18Rik, LOC641121, LOC621149
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151A11.bB6Ng01-151A11.g
ACCDH946956DH946957
length8521,151
definitionDH946956|Mus musculus domesticus DNA, BAC clone: B6Ng01-151A11, 5' end.DH946957|Mus musculus domesticus DNA, BAC clone: B6Ng01-151A11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccctgtatgaatttggactaattcttatagaatgctgtggttct
agctggctataccatgtctttatttattccactttgtatttatcctgtct
gctattaaaattgaataaattttcacttttcatatcatctacatggtgtt
atttaattaaaactctataatatatccatgttcactatatgattgattgg
tcctcaatattctattaagtccagtaatagttatgaaatgctaagaaaat
ctaattgcccttctccctactatcagaaacactttttatacttactgcga
tatttctgattcattatcatcttggtcctttcaaccttattgcaaattat
gtacaaattttctctttaagatgacactgtcatacatcagagtataatag
aagctagcatatctctcctctccgtttctagcttggttctgttacattca
tgcaaactcaaccatctttgtactttaaaatttcctctctttatcataca
tgcttattcttcccacatttaaattggtatataatcattatatatataat
gataagtttcataaggatatttttttcaaaaaatcaagtagtaccgccat
attaatataatgagatttactctttgtctacctaccccttggtgcttctc
atctgtttcctctgcccagatattgctcctactttttgtgtcttgtatat
cacatttgagagaaaactcagtatttggctttctaagtttatcttttgtg
acactatcttgagctgcatttagtcatttccattcaaaagacttcaatat
tctttaggacatactaaaactagtgtgtgtgtgtgtgtgtgtgtgtgtgt
gt
gaattcctgatctttccaaaacttttatcatgaatgggcgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatctctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatattcataagagaaattggtctgaattgctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttacgggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctttccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttgat
taggattttgtccctttgccctttagtgagtctagctaagggtttttcta
tcttgttgattttctcaaagaaccaactcctcatttggttaattctttga
atagttcttcttgtttccacttgggttaatttcacccctgagtttgatta
tttcctgctgtctactcctcttgggtgaatttgcttcctttttttctaga
gcttttagatgtgtgtcaagctgctagtatgtgctctctcccgtttcttt
ttggagtctcagagctatgagtttctctcttagaaatgctttcattgtgt
cccaacgattcggtacgtgtggctcatttcataactctaaaagtcttatt
tcttctttattcttctggaccagatcattgggagagaggtgtgttcaagt
ttcacgtgatggtgcctttccaatatttggtgtggtaattagagacaagt
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_38789115_38789966
seq2: B6Ng01-151A11.b_45_896

seq1  GAATTCCCCTGTATGAATTTGGACTAATTCTTATAGAATGCTGTGGTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCTGTATGAATTTGGACTAATTCTTATAGAATGCTGTGGTTCT  50

seq1  AGCTGGCTATACCATGTCTTTATTTATTCCACTTTGTATTTATCCTGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGCTATACCATGTCTTTATTTATTCCACTTTGTATTTATCCTGTCT  100

seq1  GCTATTAAAATTGAATAAATTTTCACTTTTCATATCATCTACATGGTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTAAAATTGAATAAATTTTCACTTTTCATATCATCTACATGGTGTT  150

seq1  ATTTAATTAAAACTCTATAATATATCCATGTTCACTATATGATTGATTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATTAAAACTCTATAATATATCCATGTTCACTATATGATTGATTGG  200

seq1  TCCTCAATATTCTATTAAGTCCAGTAATAGTTATGAAATGCTAAGAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAATATTCTATTAAGTCCAGTAATAGTTATGAAATGCTAAGAAAAT  250

seq1  CTAATTGCCCTTCTCCCTACTATCAGAAACACTTTTTATACTTACTGCGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTGCCCTTCTCCCTACTATCAGAAACACTTTTTATACTTACTGCGA  300

seq1  TATTTCTGATTCATTATCATCTTGGTCCTTTCAACCTTATTGCAAATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTGATTCATTATCATCTTGGTCCTTTCAACCTTATTGCAAATTAT  350

seq1  GTACAAATTTTCTCTTTAAGATGACACTGTCATACATCAGAGTATAATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAATTTTCTCTTTAAGATGACACTGTCATACATCAGAGTATAATAG  400

seq1  AAGCTAGCATATCTCTCCTCTCCGTTTCTAGCTTGGTTCTGTTACATTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAGCATATCTCTCCTCTCCGTTTCTAGCTTGGTTCTGTTACATTCA  450

seq1  TGCAAACTCAACCATCTTTGTACTTTAAAATTTCCTCTCTTTATCATACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACTCAACCATCTTTGTACTTTAAAATTTCCTCTCTTTATCATACA  500

seq1  TGCTTATTCTTCCCACATTTAAATTGGTATATAATCATTATATATATAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTATTCTTCCCACATTTAAATTGGTATATAATCATTATATATATAAT  550

seq1  GATAAGTTTCATAAGGATATTTTTTTCAAAAAATCAAGTAGTACCGCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGTTTCATAAGGATATTTTTTTCAAAAAATCAAGTAGTACCGCCAT  600

seq1  ATTAATATAATGAGATTTACTCTTTGTCTACCTACCCCTTGGTGCTTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATATAATGAGATTTACTCTTTGTCTACCTACCCCTTGGTGCTTCTC  650

seq1  ATCTGTTTCCTCTGCCCAGATATTGCTCCTACTTTTTGTGTCTTGTATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTTCCTCTGCCCAGATATTGCTCCTACTTTTTGTGTCTTGTATAT  700

seq1  CACATTTGAGAGAAAACTCAGTATTTGGCTTTCTAAGTTTATCTTTTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTGAGAGAAAACTCAGTATTTGGCTTTCTAAGTTTATCTTTTGTG  750

seq1  ACACTATCTTGAGCTGCATTTAGTCATTTCCATTCAAAAGACTTCAATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTATCTTGAGCTGCATTTAGTCATTTCCATTCAAAAGACTTCAATAT  800

seq1  TCTTTAGGACATACTAAAACTAGTGTGTGTGTGTGTGTGTGTGTGTGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAGGACATACTAAAACTAGTGTGTGTGTGTGTGTGTGTGTGTGTGT  850

seq1  GT  852
      ||
seq2  GT  852