BAC Information

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BAC

Clone NameB6Ng01-151B06
Chromosome8 (Build37)
Map Location 30,051,066 - 30,137,774
singlet/doubletdoublet
Overlap geneUnc5d
Upstream geneEG666422, LOC666430, EG666446, LOC100042598
Downstream geneLOC100041237
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151B06.bB6Ng01-151B06.g
ACCDH946992DH946993
length1,2421,024
definitionDH946992|Mus musculus domesticus DNA, BAC clone: B6Ng01-151B06, 5' end.DH946993|Mus musculus domesticus DNA, BAC clone: B6Ng01-151B06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,136,505 - 30,137,774)(30,051,066 - 30,052,091)
sequence
gaattcagttgctaatatgcagaactgcctgcataatgtaacatgacaaa
ggctgctatatcttcagcttcctcacagactttaaatagcatacacacag
agaattattttctttttaacttcaaccaaaactattacaagtttcattca
aatgaaaatgaggatatagtttggcattacttaaaataatggaggagaaa
ataagccatttacttaataagaatctatctacctatcatttatttatcta
tatataactatatatctatatacatatacatataattatacacacatgtg
tgtatatgtatatataatatatatattatatatatacatattactttaga
gaaataatcccacttaattatcacaccaagcttatgagttacatgacatt
ttctgttttataatttggaaaatatgattgaaatagattatgcgaatagt
tattctctaaagcccatagctctattagtctgtcatattgccatccacgt
tgttctcatgtgtttttctgtgacaagccttggaaacaatgctcatttga
taattttggaggttgaaaggtcaaagatgcagtcctggcttaggtgagaa
catcattagctatgtcacactatggtggatggcttgagtagaagcctgct
agagaaagaaatcgtgtacttttacaaggcatgaactctgcagaagttct
tcaccttcagagctctgctgcttcccatgtaactaccttgggatccatat
ttaaaatacaccagccttttaatcaaaccaaagccttgtcatagtgataa
gagtgaccacatagatgattgttttttttagatttaataactttatgtgt
atagctgttttgcctccacgtatgtttgtgtataatatactcagaggttt
cccaggaactggaattatagatggttataaccatccaggaggtagtggga
cctgaaactagtttactgcagagcagtaagtattcttagctgcgagctat
ctctgcaccctcctaatatgatgactatcttatttcagacccttcacaca
tatcatagagaggacacatgctgtagtgctggtttcatttacaaatacta
gtttaaagctgctggggaatctatttcttggactatttttggagcttcat
gtatgcattatccgatgcttgaaagcaggtgcggccatagtctagtttgt
atctcaggactatctctattttggagagcggtaatacacagc
gaattcaacagggtcttgtataaacaccagaatgaatttcaagagatcag
aaactgattaaaatcaaagaaaataaaaagggctgaatgtagtactgaaa
acaacataggctacaaaaaccgaattcaatagagagaaatatttgattac
aaaaaaccgaggatgagtctgaaagagaaaatcaaaaactctaatattaa
aaaaaagcctcgtcaacagaacaaagcataagaggatggaaacccctggc
taatgatagagtatatgaattagatcactctgtcaaaaaatgctaaatta
aagataaaagaaaaccatcagaatattcagggactataccatagtatgaa
aatatcaaatttatgaaagaaagcaaattctagatcaaaggtgcagaatg
catcttctaaaaatcataggaaaaaaatccccaaatttaggcacaagagg
cagcagaacagcaaggagaaaagagaagaaaataaattcccccattccat
actatagttaagacactatatatatgtggattatagagaaagtactgaaa
ggtataaaaaaaaaaaaaaaaaaagcccatacatcatttgaagtcacatc
tttgagagtaacaagtttcagtggaaactaaagttcagaagaattaaaaa
cattggcctcaagtcctgaaagaacataggtgccaaaccaggctgctttg
atgagcaaaattatttatcataacacaaagaaagaaaagctttccatgat
aacaacaggctaaagagttcacaactaccaaacacaactaacaggcttgc
tgtaagaaatatctctgctttattctaagaggctacttgaagaaaaggga
ataaatcatactattttacttattcaggaaaaaatgaacataaattttgc
ttaaaagaatgaaaatagcgaatacacatctttcaaaacttctgctgaat
atcaattggagtcactctccgcccccaccgcctgccccaaataccagatg
ttgggattgatttcaaaacaggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_30136505_30137774
seq2: B6Ng01-151B06.b_46_1287 (reverse)

seq1  GCTGTGTA-TACAGTTCTCCAAAAATAG-GTTATGTCACTGA-TCACAGA  47
      |||||||| ||| | ||||| ||||||| | || ||| ||||   ||| |
seq2  GCTGTGTATTACCGCTCTCC-AAAATAGAGATA-GTC-CTGAGATACA-A  46

seq1  GCTAGGGACTAAAATGCACTGCACTTGCTTCTCAAAGCAATCGAGTAATG  97
       |||  ||||   |||  | |||| ||||| || |||| ||||  |||||
seq2  ACTA--GACT---ATG-GCCGCACCTGCTT-TC-AAGC-ATCGGATAATG  87

seq1  CATACATGGAAGCTCCAAAAAAATAGGTCCAAGAAATAGATTCCACAAGC  147
      ||||||| ||||||||||||| |   |||||||||||||||||| | |||
seq2  CATACAT-GAAGCTCCAAAAATA---GTCCAAGAAATAGATTCC-CCAGC  132

seq1  AGCTTTTAACTAGTATTTGTAAATTGAAACCAGCCACTACAGCATTGTGT  197
      |||||| |||||||||||||||| ||||||||| |||||||||| |||||
seq2  AGCTTTAAACTAGTATTTGTAAA-TGAAACCAG-CACTACAGCA-TGTGT  179

seq1  CCTCTTCTATGGAATATGTGTTGAAGGGTCTGAAATAAGATAGTCATC-T  246
      |||| ||||||  ||||||| ||||||||||||||||||||||||||| |
seq2  CCTC-TCTATG--ATATGTG-TGAAGGGTCTGAAATAAGATAGTCATCAT  225

seq1  ATTAGGGAGGGGTTGCAGAGATAGCTCGGCAGCTAAGAATACTTACTGCT  296
      |||| ||||||  |||||||||||||| ||||||||||||||||||||||
seq2  ATTA-GGAGGG--TGCAGAGATAGCTC-GCAGCTAAGAATACTTACTGCT  271

seq1  CTTGCAGTAAAACTAGTTTCAGGTCCCACTACCTCCTGGATGGTTTATAA  346
      | |||||| |||||||||||||||||||||||||||||||||| ||||||
seq2  C-TGCAGT-AAACTAGTTTCAGGTCCCACTACCTCCTGGATGG-TTATAA  318

seq1  CCATCTATAATTCCAGTTCCTGGGAAACCTCTGAGTATATTATACACAAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTATAATTCCAGTTCCTGGGAAACCTCTGAGTATATTATACACAAA  368

seq1  CATACGTGGAGGCAAAACAGCTATACACATAAAGTTATTAAATCTAAAAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACGTGGAGGCAAAACAGCTATACACATAAAGTTATTAAATCTAAAAA  418

seq1  AAACAATCATCTATGTGGTCACTCTTATCACTATGACAAGGCTTTGGTTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATCATCTATGTGGTCACTCTTATCACTATGACAAGGCTTTGGTTT  468

seq1  GATTAAAAGGCTGGTGTATTTTAAATATGGATCCCAAGGTAGTTACATGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAAAGGCTGGTGTATTTTAAATATGGATCCCAAGGTAGTTACATGG  518

seq1  GAAGCAGCAGAGCTCTGAAGGTGAAGAACTTCTGCAGAGTTCATGCCTTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGCAGAGCTCTGAAGGTGAAGAACTTCTGCAGAGTTCATGCCTTG  568

seq1  TAAAAGTACACGATTTCTTTCTCTAGCAGGCTTCTACTCAAGCCATCCAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTACACGATTTCTTTCTCTAGCAGGCTTCTACTCAAGCCATCCAC  618

seq1  CATAGTGTGACATAGCTAATGATGTTCTCACCTAAGCCAGGACTGCATCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTGTGACATAGCTAATGATGTTCTCACCTAAGCCAGGACTGCATCT  668

seq1  TTGACCTTTCAACCTCCAAAATTATCAAATGAGCATTGTTTCCAAGGCTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCTTTCAACCTCCAAAATTATCAAATGAGCATTGTTTCCAAGGCTT  718

seq1  GTCACAGAAAAACACATGAGAACAACGTGGATGGCAATATGACAGACTAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGAAAAACACATGAGAACAACGTGGATGGCAATATGACAGACTAA  768

seq1  TAGAGCTATGGGCTTTAGAGAATAACTATTCGCATAATCTATTTCAATCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCTATGGGCTTTAGAGAATAACTATTCGCATAATCTATTTCAATCA  818

seq1  TATTTTCCAAATTATAAAACAGAAAATGTCATGTAACTCATAAGCTTGGT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCCAAATTATAAAACAGAAAATGTCATGTAACTCATAAGCTTGGT  868

seq1  GTGATAATTAAGTGGGATTATTTCTCTAAAGTAATATGTATATATATAAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAATTAAGTGGGATTATTTCTCTAAAGTAATATGTATATATATAAT  918

seq1  ATATATATTATATATACATATACACACATGTGTGTATAATTATATGTATA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATTATATATACATATACACACATGTGTGTATAATTATATGTATA  968

seq1  TGTATATAGATATATAGTTATATATAGATAAATAAATGATAGGTAGATAG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATAGATATATAGTTATATATAGATAAATAAATGATAGGTAGATAG  1018

seq1  ATTCTTATTAAGTAAATGGCTTATTTTCTCCTCCATTATTTTAAGTAATG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTATTAAGTAAATGGCTTATTTTCTCCTCCATTATTTTAAGTAATG  1068

seq1  CCAAACTATATCCTCATTTTCATTTGAATGAAACTTGTAATAGTTTTGGT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTATATCCTCATTTTCATTTGAATGAAACTTGTAATAGTTTTGGT  1118

seq1  TGAAGTTAAAAAGAAAATAATTCTCTGTGTGTATGCTATTTAAAGTCTGT  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTAAAAAGAAAATAATTCTCTGTGTGTATGCTATTTAAAGTCTGT  1168

seq1  GAGGAAGCTGAAGATATAGCAGCCTTTGTCATGTTACATTATGCAGGCAG  1246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGCTGAAGATATAGCAGCCTTTGTCATGTTACATTATGCAGGCAG  1218

seq1  TTCTGCATATTAGCAACTGAATTC  1270
      ||||||||||||||||||||||||
seq2  TTCTGCATATTAGCAACTGAATTC  1242

seq1: chr8_30051066_30052091
seq2: B6Ng01-151B06.g_69_1092

seq1  GAATTCAACAGGGTCTTGTATAAACACCAGAATGAATTTCAAGAGATCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAGGGTCTTGTATAAACACCAGAATGAATTTCAAGAGATCAG  50

seq1  AAACTGATTAAAATCAAAGAAAATAAAAAGGGCTGAATGTAGTACTGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGATTAAAATCAAAGAAAATAAAAAGGGCTGAATGTAGTACTGAAA  100

seq1  ACAACATAGGCTACAAAAACCGAATTCAATAGAGAGAAATATTTGATTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATAGGCTACAAAAACCGAATTCAATAGAGAGAAATATTTGATTAC  150

seq1  AAAAAACCGAGGATGAGTCTGAAAGAGAAAATCAAAAACTCTAATATTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACCGAGGATGAGTCTGAAAGAGAAAATCAAAAACTCTAATATTAA  200

seq1  AAAAAAGCCTCGTCAACAGAACAAAGCATAAGAGGATGGAAACCCCTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGCCTCGTCAACAGAACAAAGCATAAGAGGATGGAAACCCCTGGC  250

seq1  TAATGATAGAGTATATGAATTAGATCACTCTGTCAAAAAATGCTAAATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATAGAGTATATGAATTAGATCACTCTGTCAAAAAATGCTAAATTA  300

seq1  AAGATAAAAGAAAACCATCAGAATATTCAGGGACTATACCATAGTATGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAAAAGAAAACCATCAGAATATTCAGGGACTATACCATAGTATGAA  350

seq1  AATATCAAATTTATGAAAGAAAGCAAATTCTAGATCAAAGGTGCAGAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCAAATTTATGAAAGAAAGCAAATTCTAGATCAAAGGTGCAGAATG  400

seq1  CATCTTCTAAAAATCATAGGAAAAAAATCCCCAAATTTAGGCACAAGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCTAAAAATCATAGGAAAAAAATCCCCAAATTTAGGCACAAGAGG  450

seq1  CAGCAGAACAGCAAGGAGAAAAGAGAAGAAAATAAATTCCCCCATTCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGAACAGCAAGGAGAAAAGAGAAGAAAATAAATTCCCCCATTCCAT  500

seq1  ACTATAGTTAAGACACTATATATATGTGGATTATAGAGAAAGTACTGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAGTTAAGACACTATATATATGTGGATTATAGAGAAAGTACTGAAA  550

seq1  GGTATAAAAAAAAAAAAAAAAAAAGCCCATACATCATTTGAAGTCACATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATAAAAAAAAAAAAAAAAAAAGCCCATACATCATTTGAAGTCACATC  600

seq1  TTTGAGAGTAACAAGTTTCAGTGGAAACTAAAGTTCAGAAGAATTAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGAGTAACAAGTTTCAGTGGAAACTAAAGTTCAGAAGAATTAAAAA  650

seq1  CATTGGCCTCAAGTCCTGAAAGAACATAGGTGCCAAACCAGGCTGCTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGCCTCAAGTCCTGAAAGAACATAGGTGCCAAACCAGGCTGCTTTG  700

seq1  ATGAGCAAAATTATTTATCATAACACAAAGAAAGAAAAGCTTTCCATGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCAAAATTATTTATCATAACACAAAGAAAGAAAAGCTTTCCATGAT  750

seq1  AACAACAGGCTAAAGAGTTCACAACTACCAAACACAACTAACAGGCTTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAGGCTAAAGAGTTCACAACTACCAAACACAACTAACAGGCTTGC  800

seq1  TGTAAGAAATATCTCTGCTTTATTCTAAGAGGCTACTTGAAGAAAAGGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGAAATATCTCTGCTTTATTCTAAGAGGCTACTTGAAGAAAAGGGA  850

seq1  ATAAATCATACTATTTTACTTATTCAGGAAAAAAATGAACATAAATTTTG  900
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATAAATCATACTATTTTACTTATTCAGG-AAAAAATGAACATAAATTTTG  899

seq1  CTTAAAAGAATGAAAATAGCGAATACACATCTTTCAAAACTTCTGCTGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAAGAATGAAAATAGCGAATACACATCTTTCAAAACTTCTGCTGAA  949

seq1  TATCAATT-GAGTCACCTCTCCGCCCCCACCGCCTGCCCCAAATAACCAG  999
      |||||||| |||||| |||||||||||||||||||||||||||| |||||
seq2  TATCAATTGGAGTCA-CTCTCCGCCCCCACCGCCTGCCCCAAAT-ACCAG  997

seq1  ATG-TGTGATTGATTTCAAAAACAGGAT  1026
      ||| || |||||||||| ||||||||||
seq2  ATGTTGGGATTGATTTC-AAAACAGGAT  1024