BAC Information

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BAC

Clone NameB6Ng01-151G17
Chromosome8 (Build37)
Map Location 99,007,193 - 99,182,638
singlet/doubletdoublet
Overlap genenone
Upstream geneCsnk2a2, 4933406B17Rik, Ccdc113, 4931432M23Rik, EG546088, LOC100041040, Gins3, LOC547022, Ndrg4, Setd6, Cnot1, LOC100041953, LOC100041088, BC031853, LOC100041972, Got2, LOC667445
Downstream geneLOC333331, LOC546090, LOC636859
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151G17.bB6Ng01-151G17.g
ACCDH947241DH947242
length1,143777
definitionDH947241|Mus musculus domesticus DNA, BAC clone: B6Ng01-151G17, 5' end.DH947242|Mus musculus domesticus DNA, BAC clone: B6Ng01-151G17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,007,193 - 99,008,348)(99,182,046 - 99,182,638)
sequence
gaattcatttgagaaatcaacccttgggctcagtaaacaaaaacacaacc
acatccaggagcctaggtttcttttgccaaaatctttcccatagtcaggc
atacacccaaagaaaccctggttccaagccagtttaaggtttgtagaaag
aacattcaagcttcttgtcttttaagtccatccttcctcttgtaattcct
ttaaggaaatcttaatagaaggagtttatagttttggtattcctgaatct
attgcattccaaagttcctagattttggaagactgatatacagaatattt
ctagtgaaatactctgattcagtcaagattccaatattgcagcgaggact
ctgagaaggcccagagctgttcagagtcagcgagccattttctggatgtc
aggatcactctttgaactagaattggctgaagctcttcaaactctactga
ttcctcttttttcacttatatttcattgcagaaacatattcctaaattgc
agacagttgaacttttccaatgcatagatgacatgtaaactcacatgaga
gacatcttgtattgaaaacttctgctgacattttaccagtaggaaccagg
atagtggaaacctgcacacttgtgtgacatatcctccctgaaaggtcggt
atgggcatgggccagtaggtgacagtactgtgctttgccttctgctgtaa
tcatgttctttatttttaaaagatgtgtcttctaagcttcttttatctct
ggttataaagttgttctctctagggaaaatacaggcagggatatgtaatt
ttttgtttttaaattcatgaattttttcagaggacttaagacccactcaa
gagaaggaaaaccatgtctgttagccaacttcccagggaaaatgaggtta
taggccttagaaaacaatctttgacagccatttctagactagcacaacta
cttactatgtctagtctacccttatacacactgatgatgtagctaccacg
catcatcaagaatctttttatagtaatggagaccatccacagaaaacact
agacacatgccaggtcattgaacagagtgacccagcctcatggatacctc
gacgtacatcttcctgcatctatgtcagaacatcattaagagg
gaattcagtctgaaagagaagttatacaaaagtaaggctggaagcctaga
tgaacataaagtctgtataaaacttaacatttacaatcaattttcaaatg
ttggacttgaatcgttggctaatggtgacctgttcaggaagtcctatctt
atgacaattatcttgaagagtattaccaatgttttcttctatcagtgttt
tagtatttcaaaaaatgctgtgcaatctaggtgtggggagcgattaaaca
gaccttcccagcagaacctataaaccacagcaattgccagcatggtaata
cgtgtatataggtgcaataggtactcacctgtcagtgacaaccagaagct
gtctaatagcacttaaggtcaacttaactagaaggagatcatctatgtta
ctgataacctaccttgccagctttccacacaatagaaaagaatctactac
caccagatggctagagcagggtaattccttactacattctactcttatgc
ttatacctacagataatgtagctatcacactttattgaagacgccttttc
ctttgcagttaatggagacagtgcagaaaacaagtggacacaatgcatgg
ttcaacagagcacagtgagcccagccccattagataaacttacatcacag
ttcctgcatctatggctcagtaaatatgacagtagagaaggtacagagat
tgtaggagaagaataccagtaagtctctatgaaacagtgtgttctaaaac
agctgcacataaaccaaacatgggaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_99007193_99008348
seq2: B6Ng01-151G17.b_45_1187

seq1  GAATTCATTTGAGAAATCAACCCTTGGGCTCAGTAAACAAAAACACAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTGAGAAATCAACCCTTGGGCTCAGTAAACAAAAACACAACC  50

seq1  ACATCCAGGAGCCTAGGTTTCTTTTGCCAAAATCTTTCCCATAGTCAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCAGGAGCCTAGGTTTCTTTTGCCAAAATCTTTCCCATAGTCAGGC  100

seq1  ATACACCCAAAGAAACCCTGGTTCCAAGCCAGTTTAAGGTTTGTAGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACCCAAAGAAACCCTGGTTCCAAGCCAGTTTAAGGTTTGTAGAAAG  150

seq1  AACATTCAAGCTTCTTGTCTTTTAAGTCCATCCTTCCTCTTGTAATTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCAAGCTTCTTGTCTTTTAAGTCCATCCTTCCTCTTGTAATTCCT  200

seq1  TTAAGGAAATCTTAATAGAAGGAGTTTATAGTTTTGGTATTCCTGAATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGAAATCTTAATAGAAGGAGTTTATAGTTTTGGTATTCCTGAATCT  250

seq1  ATTGCATTCCAAAGTTCCTAGATTTTGGAAGACTGATATACAGAATATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCATTCCAAAGTTCCTAGATTTTGGAAGACTGATATACAGAATATTT  300

seq1  CTAGTGAAATACTCTGATTCAGTCAAGATTCCAATATTGCAGCGAGGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGAAATACTCTGATTCAGTCAAGATTCCAATATTGCAGCGAGGACT  350

seq1  CTGAGAAGGCCCAGAGCTGTTCAGAGTCAGCGAGCCATTTTCTGGATGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAGGCCCAGAGCTGTTCAGAGTCAGCGAGCCATTTTCTGGATGTC  400

seq1  AGGATCACTCTTTGAACTAGAATTGGCTGAAGCTCTTCAAACTCTACTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCACTCTTTGAACTAGAATTGGCTGAAGCTCTTCAAACTCTACTGA  450

seq1  TTCCTCTTTTTTCACTTATATTTCATTGCAGAAACATATTCCTAAATTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTTTTTTCACTTATATTTCATTGCAGAAACATATTCCTAAATTGC  500

seq1  AGACAGTTGAACTTTTCCAATGCATAGATGACATGTAAACTCACATGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTTGAACTTTTCCAATGCATAGATGACATGTAAACTCACATGAGA  550

seq1  GACATCTTGTATTGAAAACTTCTGCTGACATTTTACCAGTAGGAACCAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCTTGTATTGAAAACTTCTGCTGACATTTTACCAGTAGGAACCAGG  600

seq1  ATAGTGGAAACCTGCACACTTGTGTGACATATCCTCCCTGAAAGGTCGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGGAAACCTGCACACTTGTGTGACATATCCTCCCTGAAAGGTCGGT  650

seq1  ATGGGCATGGGCCAGTAGGTGACAGTACTGTGCTTTGCCTTCTGCTGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCATGGGCCAGTAGGTGACAGTACTGTGCTTTGCCTTCTGCTGTAA  700

seq1  TCATGTTCTTTATTTTTAAAAGATGTGTCTTCTAAGCTTCTTTTATCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTCTTTATTTTTAAAAGATGTGTCTTCTAAGCTTCTTTTATCTCT  750

seq1  GGTTATAAAGTTGTTCTCTCTAGGGAAAATACAGGCAGGGATATGTAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATAAAGTTGTTCTCTCTAGGGAAAATACAGGCAGGGATATGTAATT  800

seq1  TTTTGTTTTTAAATTCATGAATTTTTTCAGAGGACTTAAGACCCACTCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTTAAATTCATGAATTTTTTCAGAGGACTTAAGACCCACTCAA  850

seq1  GAGAAGGAAAACCATGTCTGTTAGCCAACTTCCCAGGGAAAATGAGGTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGAAAACCATGTCTGTTAGCCAACTTCCCAGGGAAAATGAGGTTA  900

seq1  TAGGCCTTAGAAAACAATCTTTGACAGCCATTTTCTAGACTAGCACAACT  950
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TAGGCCTTAGAAAACAATCTTTGACAGCCA-TTTCTAGACTAGCACAACT  949

seq1  ACTTACTATGTCTAGTCTTACCCTTATACACACTGATGATGTAGCTACCA  1000
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACTTACTATGTCTAGTC-TACCCTTATACACACTGATGATGTAGCTACCA  998

seq1  CGCATCATCAAAGAAATCTTTTATAGTAAATGGAGACCAT-CACAGAAAA  1049
      ||||||||| |||||   ||||||||| |||||||||||| |||||||||
seq2  CGCATCATC-AAGAATCTTTTTATAGT-AATGGAGACCATCCACAGAAAA  1046

seq1  CAACTAGACACAATGCAGAGTTCAATGAACAGAGTGGACCCAGCCCCAGT  1099
      | ||||||||| ||||  || ||| |||||||||| ||||||||| || |
seq2  C-ACTAGACAC-ATGC-CAGGTCATTGAACAGAGT-GACCCAGCCTCA-T  1091

seq1  GGATA-CTCGACGTCACATC-TCCTGCATCTATGGTTCAGGAAACCATCA  1147
      ||||| |||||||| ||||| |||||||||||||  ||||   | |||||
seq2  GGATACCTCGACGT-ACATCTTCCTGCATCTATG--TCAG---AACATCA  1135

seq1  TTAAAGAGG  1156
      || ||||||
seq2  TT-AAGAGG  1143

seq1: chr8_99182046_99182638
seq2: B6Ng01-151G17.g_65_657 (reverse)

seq1  TTGTGTCCACTTGTTTTCTGCACTGTCTCCATTAACTGCAAAGGAAAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCCACTTGTTTTCTGCACTGTCTCCATTAACTGCAAAGGAAAAGG  50

seq1  CGTCTTCAATAAAGTGTGATAGCTACATTATCTGTAGGTATAAGCATAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTTCAATAAAGTGTGATAGCTACATTATCTGTAGGTATAAGCATAAG  100

seq1  AGTAGAATGTAGTAAGGAATTACCCTGCTCTAGCCATCTGGTGGTAGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAATGTAGTAAGGAATTACCCTGCTCTAGCCATCTGGTGGTAGTAG  150

seq1  ATTCTTTTCTATTGTGTGGAAAGCTGGCAAGGTAGGTTATCAGTAACATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTTCTATTGTGTGGAAAGCTGGCAAGGTAGGTTATCAGTAACATA  200

seq1  GATGATCTCCTTCTAGTTAAGTTGACCTTAAGTGCTATTAGACAGCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATCTCCTTCTAGTTAAGTTGACCTTAAGTGCTATTAGACAGCTTCT  250

seq1  GGTTGTCACTGACAGGTGAGTACCTATTGCACCTATATACACGTATTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTCACTGACAGGTGAGTACCTATTGCACCTATATACACGTATTACC  300

seq1  ATGCTGGCAATTGCTGTGGTTTATAGGTTCTGCTGGGAAGGTCTGTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGGCAATTGCTGTGGTTTATAGGTTCTGCTGGGAAGGTCTGTTTAA  350

seq1  TCGCTCCCCACACCTAGATTGCACAGCATTTTTTGAAATACTAAAACACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTCCCCACACCTAGATTGCACAGCATTTTTTGAAATACTAAAACACT  400

seq1  GATAGAAGAAAACATTGGTAATACTCTTCAAGATAATTGTCATAAGATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAAGAAAACATTGGTAATACTCTTCAAGATAATTGTCATAAGATAG  450

seq1  GACTTCCTGAACAGGTCACCATTAGCCAACGATTCAAGTCCAACATTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCTGAACAGGTCACCATTAGCCAACGATTCAAGTCCAACATTTGA  500

seq1  AAATTGATTGTAAATGTTAAGTTTTATACAGACTTTATGTTCATCTAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGATTGTAAATGTTAAGTTTTATACAGACTTTATGTTCATCTAGGC  550

seq1  TTCCAGCCTTACTTTTGTATAACTTCTCTTTCAGACTGAATTC  593
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGCCTTACTTTTGTATAACTTCTCTTTCAGACTGAATTC  593