BAC Information

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BAC

Clone NameB6Ng01-151L18
Chromosome8 (Build37)
Map Location 100,820,693 - 100,909,001
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC546090, LOC636859, EG384885, LOC100041173, EG636915
Downstream geneCdh8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151L18.bB6Ng01-151L18.g
ACCDH947479DH947480
length7811,005
definitionDH947479|Mus musculus domesticus DNA, BAC clone: B6Ng01-151L18, 5' end.DH947480|Mus musculus domesticus DNA, BAC clone: B6Ng01-151L18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,908,221 - 100,909,001)(100,820,693 - 100,821,690)
sequence
gaattcttttaaagatcccctttctttgtaattactggtatgattttatt
ttttatgttttccaaaataaagcattgtaaaatcttactttctagtgctg
catttggatttgatcctttaatcggcagccatatttattccccaaattag
ttctcaaaggtcaaccatcaatcaattatctactgctttcctgtgttaat
tggtagtatatgtttgaaaaggctttaaacatcaatgtttgcattctgac
tctgaaatctaaacggctccaggaggaaaagaaggttattttggaagata
taatgggctcagtttctaatgcagaatgcatgtatttaattgcctttata
tctctggctgttttttatgaagctgtgtacattccatatcactacttgct
tatttgaaaagcaaaatcagaagtatgaattcatcaatagacactttaag
acatgacagagagcaaccacagaaaaataaggatgctattattcatcaaa
ggttttatatagataaaggcaaagttgacctttttttttttttcaaaaaa
acaaaaacaaacaaaaaataacaaaccttatatctggttcctgttttcaa
tatagtaagccagaaaataaactgtgcattgtgaaatatgtttttaaaat
atggttaaatgactatggaaaaataactgtgagatagtctacccaactcc
aattcctgggtgaaaatctgagagttaaaaaaagttgaattatggtctac
tcctctattcttccactcctcctcctcctcc
gaattcttattaactgaaatttctagcacctcacgttgactgtgatatga
aaattaagctaaaattttctccatgagattgtccataagattggtcaaaa
tgaggggagacgtagaagtagaaagaaggaagaaggtgtatgtgagatga
actgttggttaagtcagaaaaagtcgggtatacaaagagagagagagaaa
gagagagagagagagattaaaggagggagcaagagggaggaaggaaaaga
gggagagacagagagaaaaaatgcacacacagagacagatacagagagta
taatatactttatttcaggaagattcatctcctaaactctctataacatc
ccaagagcagctccaccatctggagatcaagctttcaaacacaaggctgc
aggagacactttatactctaactctaaaagactccaaatgctaactttca
tttaaacagacaggcacaggatctaattatcactccttcaaaaacccatt
cctgtttttttttctttaagttttacagttcactggagagtttagaatgt
ttattatttaaggacatcataaaagaaaaataaatgaatatatatatata
tatatatatatatatatatatatatatatatatatatatctccaaggttt
tttttttttactttattaaaaaatgattggaaaatttttattttgtttct
gtaaaaatttctcactggaaaaataccaccatactcaaatggggaaaaat
tatcttttaactattagagaaaacgtattttttttttatatttaagggaa
gaaaactttgatatacctactaatgtcaaaatgtacctaataaataaccc
aataaaatacattaagtagctacttctaatttctgttttgtttatatttt
tcaaactttgaagggtcgtttgtatttatatatttaataacatatatgta
ctgatgattgcatacttgatagtaataaaatatctcttgaaatgaattga
gaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_100908221_100909001
seq2: B6Ng01-151L18.b_44_824 (reverse)

seq1  GGAGGAGGAGGAGGAGTGGAAGAATAGAGGAGTAGACCATAATTCAACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGGAGGAGGAGTGGAAGAATAGAGGAGTAGACCATAATTCAACTT  50

seq1  TTTTTAACTCTCAGATTTTCACCCAGGAATTGGAGTTGGGTAGACTATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAACTCTCAGATTTTCACCCAGGAATTGGAGTTGGGTAGACTATCT  100

seq1  CACAGTTATTTTTCCATAGTCATTTAACCATATTTTAAAAACATATTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTATTTTTCCATAGTCATTTAACCATATTTTAAAAACATATTTCA  150

seq1  CAATGCACAGTTTATTTTCTGGCTTACTATATTGAAAACAGGAACCAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCACAGTTTATTTTCTGGCTTACTATATTGAAAACAGGAACCAGAT  200

seq1  ATAAGGTTTGTTATTTTTTGTTTGTTTTTGTTTTTTTGAAAAAAAAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGTTTGTTATTTTTTGTTTGTTTTTGTTTTTTTGAAAAAAAAAAAA  250

seq1  AGGTCAACTTTGCCTTTATCTATATAAAACCTTTGATGAATAATAGCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAACTTTGCCTTTATCTATATAAAACCTTTGATGAATAATAGCATC  300

seq1  CTTATTTTTCTGTGGTTGCTCTCTGTCATGTCTTAAAGTGTCTATTGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTTTCTGTGGTTGCTCTCTGTCATGTCTTAAAGTGTCTATTGATG  350

seq1  AATTCATACTTCTGATTTTGCTTTTCAAATAAGCAAGTAGTGATATGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATACTTCTGATTTTGCTTTTCAAATAAGCAAGTAGTGATATGGAA  400

seq1  TGTACACAGCTTCATAAAAAACAGCCAGAGATATAAAGGCAATTAAATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACACAGCTTCATAAAAAACAGCCAGAGATATAAAGGCAATTAAATAC  450

seq1  ATGCATTCTGCATTAGAAACTGAGCCCATTATATCTTCCAAAATAACCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTCTGCATTAGAAACTGAGCCCATTATATCTTCCAAAATAACCTT  500

seq1  CTTTTCCTCCTGGAGCCGTTTAGATTTCAGAGTCAGAATGCAAACATTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCTCCTGGAGCCGTTTAGATTTCAGAGTCAGAATGCAAACATTGA  550

seq1  TGTTTAAAGCCTTTTCAAACATATACTACCAATTAACACAGGAAAGCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAAGCCTTTTCAAACATATACTACCAATTAACACAGGAAAGCAGT  600

seq1  AGATAATTGATTGATGGTTGACCTTTGAGAACTAATTTGGGGAATAAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATTGATTGATGGTTGACCTTTGAGAACTAATTTGGGGAATAAATA  650

seq1  TGGCTGCCGATTAAAGGATCAAATCCAAATGCAGCACTAGAAAGTAAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCCGATTAAAGGATCAAATCCAAATGCAGCACTAGAAAGTAAGAT  700

seq1  TTTACAATGCTTTATTTTGGAAAACATAAAAAATAAAATCATACCAGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAATGCTTTATTTTGGAAAACATAAAAAATAAAATCATACCAGTAA  750

seq1  TTACAAAGAAAGGGGATCTTTAAAAGAATTC  781
      |||||||||||||||||||||||||||||||
seq2  TTACAAAGAAAGGGGATCTTTAAAAGAATTC  781

seq1: chr8_100820693_100821690
seq2: B6Ng01-151L18.g_68_1072

seq1  GAATTCTTATTAACTGAAATTTCTAGCACCTCACGTTGACTGTGATATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATTAACTGAAATTTCTAGCACCTCACGTTGACTGTGATATGA  50

seq1  AAATTAAGCTAAAATTTTCTCCATGAGATTGTCCATAAGATTGGTCAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAGCTAAAATTTTCTCCATGAGATTGTCCATAAGATTGGTCAAAA  100

seq1  TGAGGGGAGACGTAGAAGTAGAAAGAAGGAAGAAGGTGTATGTGAGATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGGAGACGTAGAAGTAGAAAGAAGGAAGAAGGTGTATGTGAGATGA  150

seq1  ACTGTTGGTTAAGTCAGAAAAAGTCGGGTATACAAAGAGAGAGAGAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGGTTAAGTCAGAAAAAGTCGGGTATACAAAGAGAGAGAGAGAAA  200

seq1  GAGAGAGAGAGAGAGATTAAAGGAGGGAGCAAGAGGGAGGAAGGAAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGATTAAAGGAGGGAGCAAGAGGGAGGAAGGAAAAGA  250

seq1  GGGAGAGACAGAGAGAAAAAATGCACACACAGAGACAGATACAGAGAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGACAGAGAGAAAAAATGCACACACAGAGACAGATACAGAGAGTA  300

seq1  TAATATACTTTATTTCAGGAAGATTCATCTCCTAAACTCTCTATAACATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATACTTTATTTCAGGAAGATTCATCTCCTAAACTCTCTATAACATC  350

seq1  CCAAGAGCAGCTCCACCATCTGGAGATCAAGCTTTCAAACACAAGGCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAGCAGCTCCACCATCTGGAGATCAAGCTTTCAAACACAAGGCTGC  400

seq1  AGGAGACACTTTATACTCTAACTCTAAAAGACTCCAAATGCTAACTTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGACACTTTATACTCTAACTCTAAAAGACTCCAAATGCTAACTTTCA  450

seq1  TTTAAACAGACAGGCACAGGATCTAATTATCACTCCTTCAAAAACCCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACAGACAGGCACAGGATCTAATTATCACTCCTTCAAAAACCCATT  500

seq1  CCTGTTTTTTTTTCTTTAAGTTTTACAGTTCACTGGAGAGTTTAGAATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTTTTTTTCTTTAAGTTTTACAGTTCACTGGAGAGTTTAGAATGT  550

seq1  TTATTATTTAAGGACATCATAAAAGAAAAATAAATGAATATATATATATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTTAAGGACATCATAAAAGAAAAATAAATGAATATATATATATA  600

seq1  TATATATATATATATATATATATATATATATATATATATCACCAAGG-TT  649
      |||||||||||||||||||||||||||||||||||||||| |||||| ||
seq2  TATATATATATATATATATATATATATATATATATATATCTCCAAGGTTT  650

seq1  TTTTTTTTTACTTTATTAAAAAATGATTGGAAAATTTTTATTTTGTTTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTACTTTATTAAAAAATGATTGGAAAATTTTTATTTTGTTTCT  700

seq1  GTAATAATTTTTCACTGGAAAAATACCACCATAATCAAAT-GGGAAAAAT  748
      |||| ||||| |||||||||||||||||||||| |||||| |||||||||
seq2  GTAAAAATTTCTCACTGGAAAAATACCACCATACTCAAATGGGGAAAAAT  750

seq1  TATC-TTTAACTATTAAAGAAAACGTAGTTTTTTTTTATATTTAA-GGAA  796
      |||| ||||||||||| |||||||||| ||||||||||||||||| ||||
seq2  TATCTTTTAACTATTAGAGAAAACGTATTTTTTTTTTATATTTAAGGGAA  800

seq1  GAAAACTTTGATATACCTACTAAT-TCAAAATGTACCTAATAAATAACCC  845
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GAAAACTTTGATATACCTACTAATGTCAAAATGTACCTAATAAATAACCC  850

seq1  AATAAAATACAATAAGTAGCTACTTCTAA-TTCTGTATTGTTTATATTTT  894
      ||||||||||| ||||||||||||||||| |||||| |||||||||||||
seq2  AATAAAATACATTAAGTAGCTACTTCTAATTTCTGTTTTGTTTATATTTT  900

seq1  TCAAACATTGAAGGGTTGTTTGTATTTGTATATTTAAATACATATTATGT  944
      |||||| ||||||||| |||||||||| |||||||||  ||||| |||||
seq2  TCAAACTTTGAAGGGTCGTTTGTATTTATATATTTAATAACATA-TATGT  949

seq1  ATTTATGTATGCATACTT-ATAGTAATAATATAATCTCTTG-AATGAATT  992
      | | |||  ||||||||| |||||||||| || |||||||| ||||||||
seq2  ACTGATGATTGCATACTTGATAGTAATAAAAT-ATCTCTTGAAATGAATT  998

seq1  G-GAAAA  998
      | |||||
seq2  GAGAAAA  1005