BAC Information

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BAC

Clone NameB6Ng01-152E14
Chromosome8 (Build37)
Map Location 74,294,928 - 74,295,587
singlet/doubletsinglet
Overlap geneLOC665996
Upstream genePik3r2, LOC100041971, Mast3, Il12rb1, Arrdc2, Kcnn1, LOC100042011, Ccdc124, Slc5a5, Rpl18a, Snora68, Mtap1s, LOC100042057, LOC665858, LOC384645, LOC100041583, EG621377, 2410004L22Rik, Myo9b, 2010315L10Rik, Ocel1, Nr2f6, Ushbp1, 5430437P03Rik, Ankrd41, Abhd8, Mrpl34, 1500034J01Rik, Tmem16h, Gtpbp3, Plvap, LOC665928, Bst2, 1110012M11Rik, BC033932, Txnl6, Slc27a1, Pgls, Bcnp1, Glt25d1, Unc13a, Jak3, Insl3, B3gnt3, LOC100042289, Fcho1, EG665991
Downstream geneLOC385024, LOC675190, Zfp709, LOC670453, Zfp617, BC049349, Cyp4f18, LOC666033, Olfr372, Olfr373, Olfr374, Tpm4, Rab8a, Hsh2d, Cib3, 2510049I19Rik, Ap1m1, LOC384840, LOC100042405, Klf2, Eps15l1, Calr3, LOC100042421, 1700030K09Rik, Cherp, Slc35e1, Crsp7, LOC100042439, 9130011J15Rik, Tmem38a, Nwd1, Sin3b, F2rl3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152E14.bB6Ng01-152E14.g
ACCDH947897DH947898
length1,0271,095
definitionDH947897|Mus musculus domesticus DNA, BAC clone: B6Ng01-152E14, 5' end.DH947898|Mus musculus domesticus DNA, BAC clone: B6Ng01-152E14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgggtgtctgctattgtcctgagatctgagcaagggactccac
tcggaatctttcatttgggggctcgtctgggatcagcgtgaccacccaca
tctccgaagacccacttggaggttaaattttttgtgtaaaaatatttctg
tgagccggcgaggttcagtgttgaaatttgcagcctctatgtttcgtgag
aaacggagacctttgcctcaggatgaggcactgagtgtgaacagcagatg
tgctggaatcacaggatgctgctcactctggaggaccccctgagcaaggg
gaatgactccaggagtccttctggggcgggttgtgcacttccccaacctt
ctgcatttctgagttggttttgacagtccgttagaaaatgggcagctgtc
agtgtgtgtatgtgtgttttctttgtttgtttcgtgttttacgtggtggt
gtaaatgatggggcagactgtaaagaccctcccaagtttgactttagacc
actgtactgaagttatatcaagggcccataatctttcagtagaaattaag
aagggaccttggcaaatttttgtgcctccgagtggagtggccgactttta
atgtaaaatggtcactgcaggggacttttggtttgactcttatctttgaa
gttaaagccattgtttttcagagcagacctgggtcccacctggatcaaca
gccttaccttgtccagaattcactgccataaatcaaaccaaagattcccg
gagcatctcagagccctccccccactgctctcatgtgtgcaggtgggtca
gcacagagccctcactttctgccctaagaagaagtaagcacagcggtggc
agcagcagaggcagtgaataccctgcctggaccagcgaactttctggccc
agtgaggagaatgcatgggctcctcctcagctgctcccactcccaggcaa
gcgtgcagcctgagcctgaacagaactgaaccacaggctctgccaaaaca
gagcctctctcacccacagctcctccc
gaattctcggattggttctatacctcaattttgattgggttgttcagttt
ttctggtggtcagcttcttgagttcttttatattttggatattagccatc
tattggatgtggtattagtgaactttttccgcctaatttgtaggttgctg
ttttgtcctattgactatgtcctttgacttacacaagctttccagtttca
agtggtcccatttatcaattcttgatcttagagcctgagccattggagtt
ctgtgtaggaaatattctcctgtgtcaatgagttaaagactttctcaatt
tcttttctattagatacagtctgtttgattttatgtggagatgcttgatc
tacttggacttgaggtttgtgcatggtgacaaatatgtatctattttcct
ttttccacatacagactgccagttactacaggatcatttattgaagttgc
tttcatttttctccttgtacatttttgggttctttgttaaagattaagtg
tccataagtgtgtggttccatttctgggtcttcaattctattccatttat
caacaaatatggctctgtaccaataccatgcagtttttatcactattgct
ctgtagtatagcttgaggtcagggatgatgatttccccagaagttctttt
atttttaagaactattttcactattcttaggtttttttttcttttccaaa
tgaacttgagaatttccctgtccatgtgtttcaagaattgtgttgggatt
ttgatggggattgaattgaatctacagaatgcctttggtaggatagccat
ttttaaaaagttaattcttccaatccataagcatgggagatttctccatt
ttctgagatcttcttcaatttctttcttgagagacttgaagctattgtca
tacagatctttaacttgtttggttacttactccaagatattttatattat
ttgtagctctgtgaaggtgtgattccctatttctttctcacctggtttat
atcgacttaaggtaagctaatgattattttcgataattcttatctgcacc
ttaaattagtatccacctgtagaggttttcggacatatttgagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_74294928_74295587
seq2: B6Ng01-152E14.b_422_1073

seq1  GTCCGTTAGAAAACGGGCATCTGTCAGTGTGTGTATGTGTGTTTTCTGTG  50
      ||||||||||||| ||||| ||||||||||||||||||||||||||| ||
seq2  GTCCGTTAGAAAATGGGCAGCTGTCAGTGTGTGTATGTGTGTTTTCTTTG  50

seq1  TTTTTTTCGTGTATTAC---GTGGTGTAAACAATGGGACAGACTGTAATG  97
      ||| |||||||| ||||   ||||||||||  ||||| |||||||||| |
seq2  TTTGTTTCGTGTTTTACGTGGTGGTGTAAATGATGGGGCAGACTGTAAAG  100

seq1  ACCCCCTTAAGTTTGATTTTAGACCACTGGACTGAAGTTAGATCAAGGGC  147
      |||| |  |||||||| |||||||||||| |||||||||| |||||||||
seq2  ACCCTCCCAAGTTTGACTTTAGACCACTGTACTGAAGTTATATCAAGGGC  150

seq1  CCATAATCTTTCAGTAGAAATTAAGAAGGGACCTTGGCAGACTTTTTGCG  197
      ||||||||||||||||||||||||||||||||||||||| | |||||| |
seq2  CCATAATCTTTCAGTAGAAATTAAGAAGGGACCTTGGCA-AATTTTTGTG  199

seq1  CCTCC-----GAGTGGCCGACTCTTAATGTAAAATGGTCACTGGAGGGGA  242
      |||||     |||||||||||| |||||||||||||||||||| ||||||
seq2  CCTCCGAGTGGAGTGGCCGACTTTTAATGTAAAATGGTCACTGCAGGGGA  249

seq1  CTTTTGGTTTGACTCTTATCTTTGAAGTTAAAGCCATTGTTTTTCAGAGT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTTTTGGTTTGACTCTTATCTTTGAAGTTAAAGCCATTGTTTTTCAGAGC  299

seq1  GGACCTGGGTCCCACCCAGATCAACAGCCTTACCTCGTCCAGAATTCACT  342
       |||||||||||||||  ||||||||||||||||| ||||||||||||||
seq2  AGACCTGGGTCCCACCTGGATCAACAGCCTTACCTTGTCCAGAATTCACT  349

seq1  GCCATAAATCAAACCATAGATTCCCCGCGTGTCTCGGAGCTCCCCCCTCT  392
      |||||||||||||||| |||||||| | |  |||| |||     ||||| 
seq2  GCCATAAATCAAACCAAAGATTCCCGGAGCATCTCAGAG-----CCCTCC  394

seq1  CCCCAGCCCCCCCTCCCATGTGCGCGGGTGAGCCAGCACAGCGCCCTTGC  442
      |||||    |  ||| |||||| || |||| | |||||||| |||||  |
seq2  CCCCA----CTGCTCTCATGTGTGCAGGTGGGTCAGCACAGAGCCCTCAC  440

seq1  TTTCTGCCCTAAGAAGCAGTAAGCACA---GTGGCGGTGGCAGTGGCAGT  489
      |||||||||||||||| ||||||||||   ||||| |  |||| ||||||
seq2  TTTCTGCCCTAAGAAGAAGTAAGCACAGCGGTGGCAGCAGCAGAGGCAGT  490

seq1  GAGGACCCTGCCTGGACCAGCGCACTTTCTGGCCTGGTGATGAGAAGGCA  539
      ||  |||||||||||||||||| |||||||||||  |||| ||||| |||
seq2  GAATACCCTGCCTGGACCAGCGAACTTTCTGGCCCAGTGAGGAGAATGCA  540

seq1  CGGGGCTCCTCCTCCAGCTGCTCCCACTCCCCAGGCGAGCGCACAGCCCC  589
        ||||||||||| |||||||||||||| ||||||| ||||  ||| || 
seq2  -TGGGCTCCTCCT-CAGCTGCTCCCACT-CCCAGGCAAGCGTGCAG-CCT  586

seq1  AAGCCTGAACAGAACTGAAACCACAGGCTCCACCCGAAACAGAGCCTCCT  639
       |||||||||||||||| ||||||||||| |  || ||||||||||| ||
seq2  GAGCCTGAACAGAACTG-AACCACAGGCT-CTGCCAAAACAGAGCCT-CT  633

seq1  CTTCAACCCACAGGTCCTCCC  660
      ||   |||||||| |||||||
seq2  CT--CACCCACAGCTCCTCCC  652