BAC Information

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BAC

Clone NameB6Ng01-152J08
Chromosome8 (Build37)
Map Location 53,429,511 - 53,430,126
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC623872, LOC100040220, LOC623935
Downstream gene1190028D05Rik, LOC676688
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152J08.bB6Ng01-152J08.g
ACCDH948122DH948123
length1,120617
definitionDH948122|Mus musculus domesticus DNA, BAC clone: B6Ng01-152J08, 5' end.DH948123|Mus musculus domesticus DNA, BAC clone: B6Ng01-152J08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctatttttcccaagacttttatcatgaatgggtgatggattttg
acaaatgcttgctcagcatctaatgaaatgatcatgtgtgtgcgttttta
tttttcctttgagtttatgtagagggttatgttgatagatttccatatat
tgaaccatccctgcatccctgggatgaagcctacttgatcgtggtgaatg
atcatttttgtgtgtgcatgtgtgttcttggattcagtttgcaagaattt
tattattgagtatttttgcatccatattcataagggaaattgttttgaag
ttctctttctttgttgggtctttgtgtggtttgggtatcagagttattgt
ggcttcatagaatgaattgggtagtgttccttctctttctgtttgggcta
ctttgaaggtttgatagaactctgcactaaactcatcctgtcgtggactt
ttttggttggaagtctattaatgactgcttctatttctttacaggttctg
ggaatgtttatatagttcatctgattttgaattaattcttgtacctcaaa
tctgtctagaaattgtcattttaattcaaattttccagttttgtttaggc
tttgcaggaggatctgatgatttttttttggatttcatcagtttctgttg
ttatgcttccattttcatttctgattttgttgatttggatattgtctcta
tgcccactgtttagttttggctaagagtttaatctattaacttgactttt
ctcaaagaacaagctgctggtttggttgaatttttgtatagttcttttgg
tttctacttgggttgtgttcaggcctgagtttgattatttcctgcctact
cctcttgggtctatttgctttctttttgtttttagagcattcagttgtgc
tgtaatctgctagtatatgctctatccagttctttttgcaagtttctcag
agctatgagatttcctctagccttgctttcattgtgtcccaacagtttgg
ggtatatgtggctcattttcaataggtcaaaagccttattttctttctaa
tttctttttaatttctccttgaccaagttatctatgagaaggatacttct
aatatccacctgtatgtggc
gaattccaaccaattgatcattgttttctcactcggtctttaactgaatt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtatactgaa
aactgaacatgtatttttttctcttacaaatttcatggcaattttaatta
ttatattttttaattattacaattatattatttatttttaattattgagt
taataggtgttctccattaagtttcaaatttttatttatgcaaaagagaa
attaactataagtgaaactaacgatgatttacaagtgaatgagaagatcc
accgttacaacttttctatagattgacttaatacttgaaggaaaataacc
ttcattagcggatacatataggtatttagcacattcgatgtttcaaactt
tgaggattgattaaacataaaaaagcatagttaggccgggcatggtggcg
catgcctttaatcccagcactcgggaggtagaggcaggcggatttctgag
ttgaggccagcctggtctacaaagtgagttccaggacagccagggctaca
cagagaaaccttctctcgaataaacaaaacaaaaacaaaacaaaacaaaa
aaaacaaacaaacaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_53429511_53430126
seq2: B6Ng01-152J08.g_69_685 (reverse)

seq1  TTTTGTTTGTTTG-TTTTTTTGTTTTGTTTTG-TTTTGTTTTGTTTATTC  48
      ||||||||||||| |||||||||||||||||| |||||||||||||||||
seq2  TTTTGTTTGTTTGTTTTTTTTGTTTTGTTTTGTTTTTGTTTTGTTTATTC  50

seq1  GAGAGAAGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTTTGTA  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTTTGTA  100

seq1  GACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGT  148
      ||||||||||||||| ||||||||||||||||||||||| ||||||||||
seq2  GACCAGGCTGGCCTC-AACTCAGAAATCCGCCTGCCTCTACCTCCCGAGT  149

seq1  GCTGGGATTAAAGGCATGCGCCACCATGCCCGGCCTAACTATGCTTTTTT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGATTAAAGGCATGCGCCACCATGCCCGGCCTAACTATGCTTTTTT  199

seq1  ATGTTTAATCAATCCTCAAAGTTTGAAACATCGAATGTGCTAAATACCTA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTAATCAATCCTCAAAGTTTGAAACATCGAATGTGCTAAATACCTA  249

seq1  TATGTATCCGCTAATGAAGGTTATTTTCCTTCAAGTATTAAGTCAATCTA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATCCGCTAATGAAGGTTATTTTCCTTCAAGTATTAAGTCAATCTA  299

seq1  TAGAAAAGTTGTAACGGTGGATCTTCTCATTCACTTGTAAATCATCGTTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAGTTGTAACGGTGGATCTTCTCATTCACTTGTAAATCATCGTTA  349

seq1  GTTTCACTTATAGTTAATTTCTCTTTTGCATAAATAAAAATTTGAAACTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCACTTATAGTTAATTTCTCTTTTGCATAAATAAAAATTTGAAACTT  399

seq1  AATGGAGAACACCTATTAACTCAATAATTAAAAATAAATAATATAATTGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGAACACCTATTAACTCAATAATTAAAAATAAATAATATAATTGT  449

seq1  AATAATTAAAAAATATAATAATTAAAATTGCCATGAAATTTGTAAGAGAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTAAAAAATATAATAATTAAAATTGCCATGAAATTTGTAAGAGAA  499

seq1  AAAAATACATGTTCAGTTTTCAGTATACACACATACACACACACACACAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATACATGTTCAGTTTTCAGTATACACACATACACACACACACACAC  549

seq1  ACACACACACACACACACAATTCAGTTAAAGACCGAGTGAGAAAACAATG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACAATTCAGTTAAAGACCGAGTGAGAAAACAATG  599

seq1  ATCAATTGGTTGGAATTC  616
      ||||||||||||||||||
seq2  ATCAATTGGTTGGAATTC  617