BAC Information

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BAC

Clone NameB6Ng01-152M02
Chromosome8 (Build37)
Map Location 46,016,904 - 46,197,626
singlet/doubletdoublet
Overlap geneLOC100039508, Fat1, LOC100039673, Mtnr1a
Upstream genenone
Downstream geneEG622523, F11, Klkb1, Cyp4v3, BC035537, Tlr3, Sorbs2, Pdlim3, Ccdc110, 1700029J07Rik, 1810047C23Rik, Ankrd37, Lrp2bp, Snx25
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152M02.bB6Ng01-152M02.g
ACCDH948251DH948252
length827843
definitionDH948251|Mus musculus domesticus DNA, BAC clone: B6Ng01-152M02, 5' end.DH948252|Mus musculus domesticus DNA, BAC clone: B6Ng01-152M02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,197,076 - 46,197,626)(46,016,904 - 46,017,745)
sequence
gaattcatctcctatttcccccaaatcctatctaaagcccccaacatcgc
ttggcatttgcatatcccatagaaagcccagtcctcaggactgttgcttc
aaccccagactcccaggcagcacaattgatatccagagagaatacgtcct
ggttacccaaattcatggagataagggacatagaagagataaacatttac
ccaaggtcattgcctctttgacatcttctctcaatacagatttgtcattt
tgtctcctgcttcagactttgacctcggcttatcagctacttgatgtcat
cggacgtggccactttggagattgctggctgtgtgtacatccggggacta
gctcacacctgctacttacagcttctcctgtgaccctctcaaataacctg
acatcacctttcaccatcttccctgaccctggtgttgccatgattcccta
tcttttctatgccatcctctttggcatgacaaactatttttacagcatct
ggaatgcattctgtagaggcattaagtcccctagactgcaacaaaaccat
aaccctagatacctcatctcagccccagtgttctgcagtctataacacct
cggttctttgcggtactcaagtctaccatcgcctacctgctagttggtca
ggaatttgcatgctagtatttctcttctccaagtcgaagctcttctccta
gagaagagcccctaccgattccagccatggactcaatagctagctgctgt
gtgtaatgaaagggcagttcaaatcttgcccctccttgctgtcacaggaa
tagctgtgggtgtcgggaatatctgtg
gaattccttcacacacagcaaagctgctagaaaggaacagacctctctgg
ctgaggcttgatcagggctttaccctcttccaagccagtttccaaactac
agctttgctgatgtttaaggtaagacagtcatggttcataaggagcacgg
acgaagagcaggctctcaggagctgcgctgcattacagtagacaagcatg
ttggcttcacagctaggtagctgcagactttagccccaaacattgggcta
tcctatctacagtacacttcagtttctcatctatgagatgagggtagggg
gggattcatgatgaatgctttctagaattctgcagtcggggctttcagag
acaacctaaggaaaggaaggtttattttagctcaaggtttcaggacattg
tcatatatcatgacagggcagaacggggcagcccattcggtgggttagag
tggctgagcctgattcctggagaaccacggtgtggaggggcctatgatcc
tcaaagggctgtcactagtggcttgcttcctttagccaggccgtattaca
ttttccacagtctcccaaaacagtatcagccatagaagaacttaaaacat
gagcctgtgagggcactttaaattcaaaccataaaggacattgtgagaat
atatctatatcttatctatatctatatctatatctatatcaatatctata
tctatatctatatctatatctatatctatatctatatcgatatcgatata
tctcatagtatatattaaatatatactaatcggatgtaacatatatatac
acatagaatatatatatatgcatatatatagtccaaaataacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_46197076_46197626
seq2: B6Ng01-152M02.b_41_591 (reverse)

seq1  TATGGTTTTGTTGCAGTCTAGGGGACTTAATGCCTCTACAGAATGCATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTTTTGTTGCAGTCTAGGGGACTTAATGCCTCTACAGAATGCATTC  50

seq1  CAGATGCTGTAAAAATAGTTTGTCATGCCAAAGAGGATGGCATAGAAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGCTGTAAAAATAGTTTGTCATGCCAAAGAGGATGGCATAGAAAAG  100

seq1  ATAGGGAATCATGGCAACACCAGGGTCAGGGAAGATGGTGAAAGGTGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGAATCATGGCAACACCAGGGTCAGGGAAGATGGTGAAAGGTGATG  150

seq1  TCAGGTTATTTGAGAGGGTCACAGGAGAAGCTGTAAGTAGCAGGTGTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTTATTTGAGAGGGTCACAGGAGAAGCTGTAAGTAGCAGGTGTGAG  200

seq1  CTAGTCCCCGGATGTACACACAGCCAGCAATCTCCAAAGTGGCCACGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCCCCGGATGTACACACAGCCAGCAATCTCCAAAGTGGCCACGTCC  250

seq1  GATGACATCAAGTAGCTGATAAGCCGAGGTCAAAGTCTGAAGCAGGAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACATCAAGTAGCTGATAAGCCGAGGTCAAAGTCTGAAGCAGGAGAC  300

seq1  AAAATGACAAATCTGTATTGAGAGAAGATGTCAAAGAGGCAATGACCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGACAAATCTGTATTGAGAGAAGATGTCAAAGAGGCAATGACCTTG  350

seq1  GGTAAATGTTTATCTCTTCTATGTCCCTTATCTCCATGAATTTGGGTAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAATGTTTATCTCTTCTATGTCCCTTATCTCCATGAATTTGGGTAAC  400

seq1  CAGGACGTATTCTCTCTGGATATCAATTGTGCTGCCTGGGAGTCTGGGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACGTATTCTCTCTGGATATCAATTGTGCTGCCTGGGAGTCTGGGGT  450

seq1  TGAAGCAACAGTCCTGAGGACTGGGCTTTCTATGGGATATGCAAATGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCAACAGTCCTGAGGACTGGGCTTTCTATGGGATATGCAAATGCCA  500

seq1  AGCGATGTTGGGGGCTTTAGATAGGATTTGGGGGAAATAGGAGATGAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGATGTTGGGGGCTTTAGATAGGATTTGGGGGAAATAGGAGATGAATT  550

seq1  C  551
      |
seq2  C  551

seq1: chr8_46016904_46017745
seq2: B6Ng01-152M02.g_67_909

seq1  GAATTCCTTCACACACAGCAGAGCTGCTAGAAAGGAACAGACCTCTCTGG  50
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAATTCCTTCACACACAGCAAAGCTGCTAGAAAGGAACAGACCTCTCTGG  50

seq1  CTGAGGCTTGATCAGGGCTTTACCCTCTTCCAAGCCAGTTTCCAAACTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCTTGATCAGGGCTTTACCCTCTTCCAAGCCAGTTTCCAAACTAC  100

seq1  AGCTTTGCTGATGTTTAAGGTAAGACAGTCATGGTTCATAAGGAGCACGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGCTGATGTTTAAGGTAAGACAGTCATGGTTCATAAGGAGCACGG  150

seq1  ACGAAGAGCAGGCTCTCAGGAGCTGCGCTGCATTACAGTAGACAAGCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAGAGCAGGCTCTCAGGAGCTGCGCTGCATTACAGTAGACAAGCATG  200

seq1  TTGGCTTCACAGCTAGGTAGCTGCAGACTTTAGCCCCAAACATTGGGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTTCACAGCTAGGTAGCTGCAGACTTTAGCCCCAAACATTGGGCTA  250

seq1  TCCTATCTACAGTACACTTCAGTTTCTCATCTATGAGATGAGGGTAGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATCTACAGTACACTTCAGTTTCTCATCTATGAGATGAGGGTAGGGG  300

seq1  GGGATTCATGATGAATGCTTTCTAGAATTCTGCAGTCGGGGCTTTCAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTCATGATGAATGCTTTCTAGAATTCTGCAGTCGGGGCTTTCAGAG  350

seq1  ACAACCTAAGGAAAGGAAGGTTTATTTTAGCTCAAGGTTTCAGGACATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCTAAGGAAAGGAAGGTTTATTTTAGCTCAAGGTTTCAGGACATTG  400

seq1  TCATATATCATGACAGGGCAGAACGGGGCAGCCCATTCGGTGGGTTAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATATCATGACAGGGCAGAACGGGGCAGCCCATTCGGTGGGTTAGAG  450

seq1  TGGCTGAGCCTGATTCCTGGAGAACCGCGGTGTGGAGGGGCCTATGATCC  500
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGGCTGAGCCTGATTCCTGGAGAACCACGGTGTGGAGGGGCCTATGATCC  500

seq1  TCAAAGGGCTGTCACTAGTGGCTTGCTTCCTTTAGCCAGGCCGTATTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGGCTGTCACTAGTGGCTTGCTTCCTTTAGCCAGGCCGTATTACA  550

seq1  TTTTCCACAGTCTCCCAAAACAGTATCAGCCATAGAAGAACTTAAAACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCACAGTCTCCCAAAACAGTATCAGCCATAGAAGAACTTAAAACAT  600

seq1  GAGCCTGTGAGGGCACTTTAAATTCAAACCATAAAGGACATTGTGAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGTGAGGGCACTTTAAATTCAAACCATAAAGGACATTGTGAGAAT  650

seq1  ATATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTAT  700
      |||||||||||| |||||||||||||||||||||||||||| ||||||||
seq2  ATATCTATATCT-TATCTATATCTATATCTATATCTATATCAATATCTAT  699

seq1  ATCTATATCTATATCTATATCTATATCTATATCTATATCTATATCTATAT  750
      ||||||||||||||||||||||||||||||||||||||| ||||| ||||
seq2  ATCTATATCTATATCTATATCTATATCTATATCTATATCGATATCGATAT  749

seq1  ATCTTATAGTATATATT-AATATATACTAATGTATTGTAACATATATATC  799
      |||| |||||||||||| |||||||||||||    |||||||||||||| 
seq2  ATCTCATAGTATATATTAAATATATACTAATCGGATGTAACATATATATA  799

seq1  CATATAACATATATATATATGCATATATATA-TCCAAAAGAACC  842
      || |||  ||||||||||||||||||||||| ||||||| ||||
seq2  CACATAGAATATATATATATGCATATATATAGTCCAAAATAACC  843