BAC Information

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BAC

Clone NameB6Ng01-153E17
Chromosome8 (Build37)
Map Location 40,755,947 - 40,875,364
singlet/doubletdoublet
Overlap geneEG621431, LOC100039072
Upstream geneTusc3, LOC100038974, LOC632066, EG621335, LOC434304, Msr1
Downstream geneLOC666959, EG632166, Fgf20, 2900075B16Rik, Zdhhc2, Cnot7, Vps37a, Mtmr7, LOC100039179, Adam24, LOC667019, LOC100039170, LOC436137, Adam25, EG667041, LOC667052
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153E17.bB6Ng01-153E17.g
ACCDH948650DH948651
length9851,096
definitionDH948650|Mus musculus domesticus DNA, BAC clone: B6Ng01-153E17, 5' end.DH948651|Mus musculus domesticus DNA, BAC clone: B6Ng01-153E17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(40,874,379 - 40,875,364)(40,755,947 - 40,757,059)
sequence
gaattcaatattttacttttaaaatccaatttaaggaactatggaagtgg
ctcagtgattaaaagcattgctgatcttgcaaaaggcttgggtttggtcc
ccagcactggcacaattgcacacaccaatatctaactccagttctgttgt
gtctgacatcctcaccatctgacttctgaagccacctggcacacacatag
tccatgtacacagtaggccaatagtcatacatgtaaaataagacatatac
atttaaaaataaaaccaaaatttaacattattaaaagatatgaattgaca
ctttgtatgtgaaaagattgagataatgtaaaattgagaattttaaaatt
ttaatttgatatttctttatctttatcagtctggtagaaaagaaaaaaat
gtctgtgcacatagcttatttcaacaatgacttcattattaaatgttcta
gccagttttcttatgggaccagagttggtctttgcctttggataatattc
tttaataataagaagaaatgtagcacgtttttttaaattaattttaaact
ttttgtgccctatatagtttaacctaataatatttagcaaataaaatttg
tataataatataagaaagaatttgcctgccaaagattgtttaaaaagtga
tggaatcccaaaaaccaatctatttttactttttttttttaatttgagag
gatttaggctgtcagtcaagtagcaatgttcttggaaattgtatattata
tacatatataacatgatgatatatattatatatcatgttgtatatgtttt
gtttgctcctaaaatgatttgcctgatctgtttattaacataagatttat
accatctacaagactacagacatagaagacggagcaaagattgagagaat
ggccagtcaataaccggttcaacttgtacatcccatggactagcaataat
cactgacacttttatcagactctgttatgcttgta
gaattccaatgaatgcttattgattttactattaactgatgctaaactgc
ttttgtttggtgctaatttaaaatacatggctgagaaacattcctggaat
tatgtttgccatattcctataataaaaattatttaccagtggtcacattt
tagctaaatagaacaacctttatgggttacaaatatgtgaataatagggt
atgtgatttgttcaaacttagcaaaaaaaaagtctttcaaagatttttgt
cataatttacacactagtagttcacactaataattcatctttcaggtgtt
ccttgctattattacatgtttgatattttctctttattttcattttacca
ttctctggtagatggggctttaaattatatgattaataattaaactatga
ccactttatacaactatttacttttgtgtaccaaagctataaatatgtga
acttatattggatatgagttggaccactattcgaaggactaccttttgta
tgtgtctacctttgtaccttttcatattcatcatttaattgggttgcaaa
gctgtctcacttatcaaggctccaatgtatttttagtttgcatcacaaat
acagaaaccattataatgctatgtgtttttttttcagtcagaaatgtaaa
tttatactacataatgctcaataatttaaatttgtttttttaactctcat
atttaatttttccattgatatttttgtcttctttggctgatgaacagttc
acactcttcttaacctgaaacctaacaattttctttttattctcttggtt
aaatcatctgaacataaatttaacaagtggtttgcttcataaaaattgta
gaaaaacttacctattcggaattagttaaagtgactccttgattttactt
ttatatacagaaagaaaaattgtgtgattgccagccctgcattgaagtta
gtatctaagataattctgatccacagcattgcaggctcactcaatcaaag
aaaatgcaaattattttttcctctgggtgttgttgtcgtgttcatgaaga
gaaactaaggcactacttccctttatttttgtcctctttttaatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_40874379_40875364
seq2: B6Ng01-153E17.b_45_1029 (reverse)

seq1  TACAAGCATAACAGAGTACTGATAAAAGTGTCAGTGATTATTGCTTGTCC  50
      ||||||||||||||||| ||||||||||||||||||||||||||| ||||
seq2  TACAAGCATAACAGAGT-CTGATAAAAGTGTCAGTGATTATTGCTAGTCC  49

seq1  ATGGGATGTTACAAGTTGAACCGGTTATTGACTGGCCATTCTCTCAATCT  100
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGATG-TACAAGTTGAACCGGTTATTGACTGGCCATTCTCTCAATCT  98

seq1  CTGCTCCGTCTTCTATGTCTGTAGTTCTTGTAGATGGTATAAATCTTATG  150
       ||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTGCTCCGTCTTCTATGTCTGTAG-TCTTGTAGATGGTATAAATCTTATG  147

seq1  TTAATAAAACAGATCAGGCAAATCATTTTAGGAGCAAAC-AAACATATAC  199
      ||||| ||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTAAT-AAACAGATCAGGCAAATCATTTTAGGAGCAAACAAAACATATAC  196

seq1  AACATGATATATAATATATATCATCATGTTATATATGTATATAATATACA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGATATATAATATATATCATCATGTTATATATGTATATAATATACA  246

seq1  ATTTCCAAGAACATTGCTACTTGACTGACAGCCTAAATCCTCTCAAATT-  298
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATTTCCAAGAACATTGCTACTTGACTGACAGCCTAAATCCTCTCAAATTA  296

seq1  AAAAAAAAAAGT-AAAATAGATTGGTTTTTGGGATTCCATCACTTTTTAA  347
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAGTAAAAATAGATTGGTTTTTGGGATTCCATCACTTTTTAA  346

seq1  ACAATCTTTGGCAGGCAAATTCTTTCTTATATTATTATACAAATTTTATT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCTTTGGCAGGCAAATTCTTTCTTATATTATTATACAAATTTTATT  396

seq1  TGCTAAATATTATTAGGTTAAACTATATAGGGCACAAAAAGTTTAAAATT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAATATTATTAGGTTAAACTATATAGGGCACAAAAAGTTTAAAATT  446

seq1  AATTTAAAAAAACGTGCTACATTTCTTCTTATTATTAAAGAATATTATCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAAAAAACGTGCTACATTTCTTCTTATTATTAAAGAATATTATCC  496

seq1  AAAGGCAAAGACCAACTCTGGTCCCATAAGAAAACTGGCTAGAACATTTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAAAGACCAACTCTGGTCCCATAAGAAAACTGGCTAGAACATTTA  546

seq1  ATAATGAAGTCATTGTTGAAATAAGCTATGTGCACAGACATTTTTTTCTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGAAGTCATTGTTGAAATAAGCTATGTGCACAGACATTTTTTTCTT  596

seq1  TTCTACCAGACTGATAAAGATAAAGAAATATCAAATTAAAATTTTAAAAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACCAGACTGATAAAGATAAAGAAATATCAAATTAAAATTTTAAAAT  646

seq1  TCTCAATTTTACATTATCTCAATCTTTTCACATACAAAGTGTCAATTCAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAATTTTACATTATCTCAATCTTTTCACATACAAAGTGTCAATTCAT  696

seq1  ATCTTTTAATAATGTTAAATTTTGGTTTTATTTTTAAATGTATATGTCTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTAATAATGTTAAATTTTGGTTTTATTTTTAAATGTATATGTCTT  746

seq1  ATTTTACATGTATGACTATTGGCCTACTGTGTACATGGACTATGTGTGTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACATGTATGACTATTGGCCTACTGTGTACATGGACTATGTGTGTG  796

seq1  CCAGGTGGCTTCAGAAGTCAGATGGTGAGGATGTCAGACACAACAGAACT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTGGCTTCAGAAGTCAGATGGTGAGGATGTCAGACACAACAGAACT  846

seq1  GGAGTTAGATATTGGTGTGTGCAATTGTGCCAGTGCTGGGGACCAAACCC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTAGATATTGGTGTGTGCAATTGTGCCAGTGCTGGGGACCAAACCC  896

seq1  AAGCCTTTTGCAAGATCAGCAATGCTTTTAATCACTGAGCCACTTCCATA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTTTTGCAAGATCAGCAATGCTTTTAATCACTGAGCCACTTCCATA  946

seq1  GTTCCTTAAATTGGATTTTAAAAGTAAAATATTGAATTC  986
      |||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTTAAATTGGATTTTAAAAGTAAAATATTGAATTC  985

seq1: chr8_40755947_40757059
seq2: B6Ng01-153E17.g_70_1165

seq1  GAATTCCAATGAATGCTTATTGATTTTACTATTAACTGATGCTAAACTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATGAATGCTTATTGATTTTACTATTAACTGATGCTAAACTGC  50

seq1  TTTTGTTTGGTGCTAATTTAAAATACATGGCTGAGAAACATTCCTGGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTGGTGCTAATTTAAAATACATGGCTGAGAAACATTCCTGGAAT  100

seq1  TATGTTTGCCATATTCCTATAATAAAAATTATTTACCAGTGGTCACATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTGCCATATTCCTATAATAAAAATTATTTACCAGTGGTCACATTT  150

seq1  TAGCTAAATAGAACAACCTTTATGGGTTACAAATATGTGAATAATAGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTAAATAGAACAACCTTTATGGGTTACAAATATGTGAATAATAGGGT  200

seq1  ATGTGATTTGTTCAAACTTAGCAAAAAAAAAGTCTTTCAAAGATTTTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGATTTGTTCAAACTTAGCAAAAAAAAAGTCTTTCAAAGATTTTTGT  250

seq1  CATAATTTACACACTAGTAGTTCACACTAATAATTCATCTTTCAGGTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTTACACACTAGTAGTTCACACTAATAATTCATCTTTCAGGTGTT  300

seq1  CCTTGCTATTATTACATGTTTGATATTTTCTCTTTATTTTCATTTTACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCTATTATTACATGTTTGATATTTTCTCTTTATTTTCATTTTACCA  350

seq1  TTCTCTGGTAGATGGGGCTTTAAATTATATGATTAATAATTAAACTATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGGTAGATGGGGCTTTAAATTATATGATTAATAATTAAACTATGA  400

seq1  CCACTTTATACAACTATTTACTTTTGTGTACCAAAGCTATAAATATGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTTATACAACTATTTACTTTTGTGTACCAAAGCTATAAATATGTGA  450

seq1  ACTTATATTGGATATGAGTTGGACCACTATTCGAAGGACTACCTTTTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATATTGGATATGAGTTGGACCACTATTCGAAGGACTACCTTTTGTA  500

seq1  TGTGTCTACCTTTGTACCTTTTCATATTCATCATTTAATTGGGTTGCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTACCTTTGTACCTTTTCATATTCATCATTTAATTGGGTTGCAAA  550

seq1  GCTGTCTCACTTATCAAGGCTCCAATGTATTTTTAGTTAGCATCACAAAT  600
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GCTGTCTCACTTATCAAGGCTCCAATGTATTTTTAGTTTGCATCACAAAT  600

seq1  ACAGAAACCATTATAATGCTATGTGTTTTTTTTTCAGTCAGAAATGTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAACCATTATAATGCTATGTGTTTTTTTTTCAGTCAGAAATGTAAA  650

seq1  TTTATACTACATAATGCTCAATAATTTAAATTTGTTTTTTTAACTCTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACTACATAATGCTCAATAATTTAAATTTGTTTTTTTAACTCTCAT  700

seq1  ATTTAATTTTTCCATTGATATTTTTGTCTTCTTTTGGCTGATGAACAGTT  750
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATTTAATTTTTCCATTGATATTTTTGTCTTC-TTTGGCTGATGAACAGTT  749

seq1  CACACTCTTCTTAACCTGAAACCTAACAATTTTCTTTTTATTCTCTTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTCTTCTTAACCTGAAACCTAACAATTTTCTTTTTATTCTCTTGGT  799

seq1  TTAATCATCTGAACAT-AATTTAACAAGTGGTTTGCTTCAT-AAAATTGT  848
      | |||||||||||||| |||||||||||||||||||||||| ||||||||
seq2  TAAATCATCTGAACATAAATTTAACAAGTGGTTTGCTTCATAAAAATTGT  849

seq1  AG-AACACTTACCTATTCGG-ATTAGTTAAAGTGACTCC-TGATTTTACT  895
      || || |||||||||||||| |||||||||||||||||| ||||||||||
seq2  AGAAAAACTTACCTATTCGGAATTAGTTAAAGTGACTCCTTGATTTTACT  899

seq1  TTTATTATACAGAAAGAAAAATTGTGTGATTGCCAAGCCCCTGCATTGAA  945
      |||| ||||||||||||||||||||||||||||||   ||||||||||||
seq2  TTTA-TATACAGAAAGAAAAATTGTGTGATTGCCA--GCCCTGCATTGAA  946

seq1  AGTTTAGTATCTAAAGATAATTTCTGATACAACATGCATTGCAGGGCTTC  995
         ||||||||| ||||||| ||||||| | ||| ||||||||||   ||
seq2  --GTTAGTATCT-AAGATAA-TTCTGAT-CCACA-GCATTGCAGG--CTC  988

seq1  ACTCAATACAAAGAAGATGCAAATTTAATTTTTTTCTCTGTGTGTGTGTG  1045
      ||||||| ||||||| |||||||||  ||||||| ||||| |||| ||| 
seq2  ACTCAAT-CAAAGAAAATGCAAATT--ATTTTTTCCTCTGGGTGT-TGT-  1033

seq1  TGT-GTGTTCATGAAGAAGAACTAAAGCACATAGCACTCCTTTATTTTTT  1094
      ||| |||||||||||||  |||||| |||| || |   ||||||||||| 
seq2  TGTCGTGTTCATGAAGAGAAACTAAGGCAC-TA-CTTCCCTTTATTTTTG  1081

seq1  CTCTCTCTTTTTTTAATTA  1113
        |||    ||||||||||
seq2  TCCTC----TTTTTAATTA  1096